Protein–RNA interactions for Protein: Q01939

RPT6, 26S proteasome regulatory subunit 8 homolog, yeastyeast

Known RBP Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT6Q01939 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
RPT6Q01939 YGL149WYGL149W 306 nt1.05□□□□□ -2.24
RPT6Q01939 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
RPT6Q01939 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
RPT6Q01939 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
RPT6Q01939 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
RPT6Q01939 YIL032CYIL032C 357 nt1.05□□□□□ -2.24
RPT6Q01939 YMR031W-AYMR031W-A 327 nt1.05□□□□□ -2.24
RPT6Q01939 RPS30BYOR182C 192 nt1.05□□□□□ -2.24
RPT6Q01939 NOP9YJL010C 2001 nt1.05□□□□□ -2.24
RPT6Q01939 YOR282WYOR282W 321 nt1.04□□□□□ -2.24
RPT6Q01939 RPS27BYHR021C 249 nt1.03□□□□□ -2.24
RPT6Q01939 PAM16YJL104W 450 nt1.03□□□□□ -2.24
RPT6Q01939 ASE1YOR058C 2658 nt1.03□□□□□ -2.24
RPT6Q01939 GEA2YEL022W 4380 nt1.02□□□□□ -2.25
RPT6Q01939 MCM10YIL150C 1716 nt1.02□□□□□ -2.25
RPT6Q01939 YPL044CYPL044C 549 nt1.02□□□□□ -2.25
RPT6Q01939 VIK1YPL253C 1944 nt1.02□□□□□ -2.25
RPT6Q01939 PAU24YBR301W 363 nt1.02□□□□□ -2.25
RPT6Q01939 BUD3YCL014W 4911 nt1.01□□□□□ -2.25
RPT6Q01939 PMP1YCR024C-A 123 nt1.01□□□□□ -2.25
RPT6Q01939 PAA1YDR071C 576 nt1.01□□□□□ -2.25
RPT6Q01939 ALG13YGL047W 609 nt1.01□□□□□ -2.25
RPT6Q01939 CMC4YMR194C-B 222 nt1.01□□□□□ -2.25
RPT6Q01939 ECM12YHR021W-A 456 nt1□□□□□ -2.25
RPT6Q01939 YNL277W-AYNL277W-A 189 nt1□□□□□ -2.25
RPT6Q01939 YIL142C-AYIL142C-A 333 nt0.99□□□□□ -2.25
RPT6Q01939 YOR218CYOR218C 420 nt0.99□□□□□ -2.25
RPT6Q01939 YGR069WYGR069W 336 nt0.98□□□□□ -2.25
RPT6Q01939 YOR231C-AYOR231C-A 201 nt0.98□□□□□ -2.25
RPT6Q01939 RAD61YDR014W 1944 nt0.97□□□□□ -2.25
RPT6Q01939 YNL211CYNL211C 261 nt0.97□□□□□ -2.25
RPT6Q01939 YOR015WYOR015W 360 nt0.97□□□□□ -2.25
RPT6Q01939 MYO1YHR023W 5787 nt0.97□□□□□ -2.25
RPT6Q01939 UBP3YER151C 2739 nt0.96□□□□□ -2.26
RPT6Q01939 snR65snR65 100 nt0.96□□□□□ -2.26
RPT6Q01939 CSE2YNR010W 450 nt0.96□□□□□ -2.26
RPT6Q01939 YSP1YHR155W 3687 nt0.95□□□□□ -2.26
RPT6Q01939 IES4YOR189W 351 nt0.95□□□□□ -2.26
RPT6Q01939 BFR2YDR299W 1605 nt0.95□□□□□ -2.26
RPT6Q01939 RPL26BYGR034W 384 nt0.94□□□□□ -2.26
RPT6Q01939 YNL028WYNL028W 318 nt0.94□□□□□ -2.26
RPT6Q01939 SGF11YPL047W 300 nt0.94□□□□□ -2.26
RPT6Q01939 SMC1YFL008W 3678 nt0.94□□□□□ -2.26
RPT6Q01939 HAL9YOL089C 3093 nt0.92□□□□□ -2.26
RPT6Q01939 YAL067W-AYAL067W-A 228 nt0.92□□□□□ -2.26
RPT6Q01939 YER181CYER181C 324 nt0.91□□□□□ -2.26
RPT6Q01939 YJL026C-AYJL026C-A 222 nt0.91□□□□□ -2.26
RPT6Q01939 LTE1YAL024C 4308 nt0.91□□□□□ -2.26
RPT6Q01939 YEL020C-BYEL020C-B 198 nt0.9□□□□□ -2.27
RPT6Q01939 YFR012W-AYFR012W-A 87 nt0.89□□□□□ -2.27
RPT6Q01939 YLR120W-AYLR120W-A 102 nt0.89□□□□□ -2.27
RPT6Q01939 YML099W-AYML099W-A 330 nt0.89□□□□□ -2.27
RPT6Q01939 SEC8YPR055W 3198 nt0.88□□□□□ -2.27
RPT6Q01939 YDR354C-AYDR354C-A 144 nt0.88□□□□□ -2.27
RPT6Q01939 snR74snR74 88 nt0.87□□□□□ -2.27
RPT6Q01939 YGL052WYGL052W 306 nt0.87□□□□□ -2.27
RPT6Q01939 YJL197C-AYJL197C-A 282 nt0.87□□□□□ -2.27
RPT6Q01939 YMR172C-AYMR172C-A 384 nt0.86□□□□□ -2.27
RPT6Q01939 YOR008C-AYOR008C-A 225 nt0.86□□□□□ -2.27
RPT6Q01939 YPL152W-AYPL152W-A 99 nt0.86□□□□□ -2.27
RPT6Q01939 BEM3YPL115C 3387 nt0.86□□□□□ -2.27
RPT6Q01939 RKR1YMR247C 4689 nt0.85□□□□□ -2.27
RPT6Q01939 YDL185C-AYDL185C-A 228 nt0.85□□□□□ -2.27
RPT6Q01939 YGL041CYGL041C 204 nt0.85□□□□□ -2.27
RPT6Q01939 YPR092WYPR092W 306 nt0.85□□□□□ -2.27
RPT6Q01939 YPR160W-AYPR160W-A 81 nt0.85□□□□□ -2.27
RPT6Q01939 YHR063W-AYHR063W-A 336 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
RPT6Q01939 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
RPT6Q01939 YLL019W-AYLL019W-A 93 nt0.84□□□□□ -2.27
RPT6Q01939 YLR399W-AYLR399W-A 105 nt0.84□□□□□ -2.27
RPT6Q01939 CHS6YJL099W 2241 nt0.84□□□□□ -2.28
RPT6Q01939 YCR022CYCR022C 345 nt0.83□□□□□ -2.28
RPT6Q01939 YMR307C-AYMR307C-A 195 nt0.83□□□□□ -2.28
RPT6Q01939 NPR2YEL062W 1848 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)BtF(GAA)B 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)FtF(GAA)F 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)GtF(GAA)G 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)H1tF(GAA)H1 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)H2tF(GAA)H2 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)MtF(GAA)M 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)P1tF(GAA)P1 73 nt0.82□□□□□ -2.28
RPT6Q01939 tF(GAA)P2tF(GAA)P2 73 nt0.82□□□□□ -2.28
RPT6Q01939 SEC1YDR164C 2175 nt0.81□□□□□ -2.28
RPT6Q01939 YMR160WYMR160W 2451 nt0.81□□□□□ -2.28
RPT6Q01939 FYV10YIL097W 1551 nt0.81□□□□□ -2.28
RPT6Q01939 PRP5YBR237W 2550 nt0.81□□□□□ -2.28
RPT6Q01939 IQG1YPL242C 4488 nt0.8□□□□□ -2.28
RPT6Q01939 snR190snR190 190 nt0.8□□□□□ -2.28
RPT6Q01939 UTP20YBL004W 7482 nt0.79□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 64.7 ms