Protein–RNA interactions for Protein: P53992

SEC24C, Protein transport protein Sec24C, humanhuman

Predictions only

Length 1,094 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24CP53992 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.05■□□□□ 0.8
SEC24CP53992 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SEC24CP53992 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.05■□□□□ 0.8
SEC24CP53992 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.05■□□□□ 0.8
SEC24CP53992 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SEC24CP53992 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.05■□□□□ 0.8
SEC24CP53992 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.05■□□□□ 0.8
SEC24CP53992 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC24CP53992 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
SEC24CP53992 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
SEC24CP53992 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.04■□□□□ 0.8
SEC24CP53992 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 DPP3P2-201ENST00000416030 1696 ntBASIC20.04■□□□□ 0.8
SEC24CP53992 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.04■□□□□ 0.8
SEC24CP53992 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SEC24CP53992 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.04■□□□□ 0.8
SEC24CP53992 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.04■□□□□ 0.8
SEC24CP53992 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SEC24CP53992 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SEC24CP53992 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.04■□□□□ 0.8
SEC24CP53992 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SEC24CP53992 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SEC24CP53992 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC24CP53992 AC061975.6-201ENST00000579045 1553 ntBASIC20.04■□□□□ 0.8
SEC24CP53992 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SEC24CP53992 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.03■□□□□ 0.8
SEC24CP53992 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.03■□□□□ 0.8
SEC24CP53992 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.03■□□□□ 0.8
SEC24CP53992 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.03■□□□□ 0.8
SEC24CP53992 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC24CP53992 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SEC24CP53992 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SEC24CP53992 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 AL390961.4-201ENST00000623958 2535 ntBASIC20.02■□□□□ 0.8
SEC24CP53992 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.02■□□□□ 0.8
SEC24CP53992 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.02■□□□□ 0.8
SEC24CP53992 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
SEC24CP53992 AP004607.4-201ENST00000530158 1459 ntBASIC20.02■□□□□ 0.8
SEC24CP53992 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC24CP53992 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SEC24CP53992 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.02■□□□□ 0.79
SEC24CP53992 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SEC24CP53992 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEC24CP53992 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.02■□□□□ 0.79
SEC24CP53992 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.01■□□□□ 0.79
SEC24CP53992 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SEC24CP53992 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.01■□□□□ 0.79
SEC24CP53992 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.01■□□□□ 0.79
SEC24CP53992 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC24CP53992 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC24CP53992 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.01■□□□□ 0.79
SEC24CP53992 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC24CP53992 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.01■□□□□ 0.79
SEC24CP53992 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEC24CP53992 MIR6724-1-201ENST00000616420 92 ntBASIC20.01■□□□□ 0.79
SEC24CP53992 MIR6724-2-201ENST00000616483 92 ntBASIC20.01■□□□□ 0.79
SEC24CP53992 MIR6724-4-201ENST00000617390 92 ntBASIC20.01■□□□□ 0.79
SEC24CP53992 MIR6724-3-201ENST00000622482 92 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms