Protein–RNA interactions for Protein: P53969

SAM50, Sorting assembly machinery 50 kDa subunit, yeastyeast

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SAM50P53969 YDR354C-AYDR354C-A 144 nt1.26□□□□□ -2.21
SAM50P53969 tQ(UUG)E2tQ(UUG)E2 72 nt1.26□□□□□ -2.21
SAM50P53969 PAM16YJL104W 450 nt1.26□□□□□ -2.21
SAM50P53969 YBR221W-AYBR221W-A 105 nt1.26□□□□□ -2.21
SAM50P53969 STO1YMR125W 2586 nt1.26□□□□□ -2.21
SAM50P53969 MSN5YDR335W 3675 nt1.26□□□□□ -2.21
SAM50P53969 PAN2YGL094C 3348 nt1.25□□□□□ -2.21
SAM50P53969 ISD11YER048W-A 285 nt1.25□□□□□ -2.21
SAM50P53969 AZF1YOR113W 2745 nt1.24□□□□□ -2.21
SAM50P53969 EST2YLR318W 2655 nt1.24□□□□□ -2.21
SAM50P53969 SWI4YER111C 3282 nt1.24□□□□□ -2.21
SAM50P53969 YDL196WYDL196W 330 nt1.24□□□□□ -2.21
SAM50P53969 OLI1Q0130 231 nt1.24□□□□□ -2.21
SAM50P53969 YOR161W-BYOR161W-B 261 nt1.24□□□□□ -2.21
SAM50P53969 YJR029WYJR029W 5268 nt1.24□□□□□ -2.21
SAM50P53969 YPR137C-BYPR137C-B 5268 nt1.24□□□□□ -2.21
SAM50P53969 APL3YBL037W 3078 nt1.23□□□□□ -2.21
SAM50P53969 YNL097C-BYNL097C-B 123 nt1.23□□□□□ -2.21
SAM50P53969 CDC31YOR257W 486 nt1.23□□□□□ -2.21
SAM50P53969 YOR345CYOR345C 351 nt1.23□□□□□ -2.21
SAM50P53969 YBR131C-AYBR131C-A 90 nt1.23□□□□□ -2.21
SAM50P53969 YCS4YLR272C 3531 nt1.22□□□□□ -2.21
SAM50P53969 ULI1YFR026C 510 nt1.22□□□□□ -2.21
SAM50P53969 MYO1YHR023W 5787 nt1.21□□□□□ -2.22
SAM50P53969 YDL185C-AYDL185C-A 228 nt1.21□□□□□ -2.22
SAM50P53969 YJL026C-AYJL026C-A 222 nt1.21□□□□□ -2.22
SAM50P53969 YLL020CYLL020C 306 nt1.21□□□□□ -2.22
SAM50P53969 SMC1YFL008W 3678 nt1.21□□□□□ -2.22
SAM50P53969 YCR018C-AYCR018C-A 255 nt1.2□□□□□ -2.22
SAM50P53969 YNL337WYNL337W 255 nt1.2□□□□□ -2.22
SAM50P53969 MSH3YCR092C 3057 nt1.2□□□□□ -2.22
SAM50P53969 WAR1YML076C 2835 nt1.2□□□□□ -2.22
SAM50P53969 CDC39YCR093W 6327 nt1.2□□□□□ -2.22
SAM50P53969 GEA2YEL022W 4380 nt1.19□□□□□ -2.22
SAM50P53969 YEL014CYEL014C 306 nt1.19□□□□□ -2.22
SAM50P53969 YNL211CYNL211C 261 nt1.19□□□□□ -2.22
SAM50P53969 LAA1YJL207C 6045 nt1.18□□□□□ -2.22
SAM50P53969 YBR200W-AYBR200W-A 165 nt1.18□□□□□ -2.22
SAM50P53969 ANS1YHR126C 480 nt1.17□□□□□ -2.22
SAM50P53969 APL1YJR005W 2103 nt1.17□□□□□ -2.22
SAM50P53969 NUP145YGL092W 3954 nt1.17□□□□□ -2.22
SAM50P53969 CDC25YLR310C 4770 nt1.17□□□□□ -2.22
SAM50P53969 PAA1YDR071C 576 nt1.16□□□□□ -2.22
SAM50P53969 YAL067W-AYAL067W-A 228 nt1.16□□□□□ -2.22
SAM50P53969 NST1YNL091W 3723 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
SAM50P53969 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
SAM50P53969 EAF1YDR359C 2949 nt1.14□□□□□ -2.23
SAM50P53969 STB6YKL072W 2301 nt1.14□□□□□ -2.23
SAM50P53969 YIL134C-AYIL134C-A 204 nt1.14□□□□□ -2.23
SAM50P53969 YNL198CYNL198C 303 nt1.14□□□□□ -2.23
SAM50P53969 RPS30BYOR182C 192 nt1.14□□□□□ -2.23
SAM50P53969 CMC4YMR194C-B 222 nt1.13□□□□□ -2.23
SAM50P53969 CLU1YMR012W 3834 nt1.13□□□□□ -2.23
SAM50P53969 SEC3YER008C 4011 nt1.12□□□□□ -2.23
SAM50P53969 NOP9YJL010C 2001 nt1.11□□□□□ -2.23
SAM50P53969 RPL33BYOR234C 324 nt1.11□□□□□ -2.23
SAM50P53969 snR46snR46 197 nt1.11□□□□□ -2.23
SAM50P53969 TTI1YKL033W 3117 nt1.11□□□□□ -2.23
SAM50P53969 COY1YKL179C 2040 nt1.1□□□□□ -2.23
SAM50P53969 YJL150WYJL150W 303 nt1.1□□□□□ -2.23
SAM50P53969 COX12YLR038C 252 nt1.1□□□□□ -2.23
SAM50P53969 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
SAM50P53969 NUP157YER105C 4176 nt1.09□□□□□ -2.23
SAM50P53969 YCR038W-AYCR038W-A 126 nt1.09□□□□□ -2.23
SAM50P53969 YFR012W-AYFR012W-A 87 nt1.09□□□□□ -2.23
SAM50P53969 YPL044CYPL044C 549 nt1.09□□□□□ -2.23
SAM50P53969 snR52snR52 92 nt1.09□□□□□ -2.23
SAM50P53969 YJL182CYJL182C 318 nt1.08□□□□□ -2.24
SAM50P53969 HAL9YOL089C 3093 nt1.07□□□□□ -2.24
SAM50P53969 YLR466C-BYLR466C-B 117 nt1.07□□□□□ -2.24
SAM50P53969 PMP1YCR024C-A 123 nt1.06□□□□□ -2.24
SAM50P53969 YGL123C-AYGL123C-A 231 nt1.06□□□□□ -2.24
SAM50P53969 YOR225WYOR225W 330 nt1.06□□□□□ -2.24
SAM50P53969 ASE1YOR058C 2658 nt1.05□□□□□ -2.24
SAM50P53969 YGR151CYGR151C 336 nt1.05□□□□□ -2.24
SAM50P53969 YOR161W-AYOR161W-A 81 nt1.05□□□□□ -2.24
SAM50P53969 RPL26BYGR034W 384 nt1.04□□□□□ -2.24
SAM50P53969 YIL002W-AYIL002W-A 210 nt1.04□□□□□ -2.24
SAM50P53969 tV(UAC)BtV(UAC)B 74 nt1.04□□□□□ -2.24
SAM50P53969 tV(UAC)DtV(UAC)D 74 nt1.04□□□□□ -2.24
SAM50P53969 YER053C-AYER053C-A 114 nt1.03□□□□□ -2.24
SAM50P53969 YGL007C-AYGL007C-A 87 nt1.03□□□□□ -2.24
SAM50P53969 YLR282CYLR282C 342 nt1.03□□□□□ -2.24
SAM50P53969 SPT7YBR081C 3999 nt1.03□□□□□ -2.24
SAM50P53969 Q0032Q0032 291 nt1.02□□□□□ -2.25
SAM50P53969 YLR342W-AYLR342W-A 174 nt1.02□□□□□ -2.25
SAM50P53969 PRP39YML046W 1890 nt1.02□□□□□ -2.25
SAM50P53969 IML1YJR138W 4755 nt1.02□□□□□ -2.25
SAM50P53969 COX5BYIL111W 456 nt1.01□□□□□ -2.25
SAM50P53969 snR190snR190 190 nt1.01□□□□□ -2.25
SAM50P53969 VAM6YDL077C 3150 nt1□□□□□ -2.25
SAM50P53969 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
SAM50P53969 YEL073CYEL073C 324 nt0.99□□□□□ -2.25
SAM50P53969 YKL100W-AYKL100W-A 90 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms