Protein–RNA interactions for Protein: P53600

RET3, Coatomer subunit zeta, yeastyeast

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RET3P53600 SSS1YDR086C 243 nt0.77□□□□□ -2.29
RET3P53600 YJL120WYJL120W 324 nt0.77□□□□□ -2.29
RET3P53600 YPR197CYPR197C 564 nt0.77□□□□□ -2.29
RET3P53600 NOP9YJL010C 2001 nt0.77□□□□□ -2.29
RET3P53600 YAF9YNL107W 681 nt0.76□□□□□ -2.29
RET3P53600 PMP1YCR024C-A 123 nt0.75□□□□□ -2.29
RET3P53600 SGF11YPL047W 300 nt0.75□□□□□ -2.29
RET3P53600 PAA1YDR071C 576 nt0.74□□□□□ -2.29
RET3P53600 YHR063W-AYHR063W-A 336 nt0.74□□□□□ -2.29
RET3P53600 YPL038W-AYPL038W-A 192 nt0.74□□□□□ -2.29
RET3P53600 YPL225WYPL225W 441 nt0.74□□□□□ -2.29
RET3P53600 YDL073WYDL073W 2955 nt0.74□□□□□ -2.29
RET3P53600 YHL046W-AYHL046W-A 327 nt0.73□□□□□ -2.29
RET3P53600 YNL211CYNL211C 261 nt0.73□□□□□ -2.29
RET3P53600 YDR102CYDR102C 333 nt0.72□□□□□ -2.29
RET3P53600 YIL115W-AYIL115W-A 372 nt0.72□□□□□ -2.29
RET3P53600 YMR321CYMR321C 318 nt0.72□□□□□ -2.29
RET3P53600 NPR2YEL062W 1848 nt0.71□□□□□ -2.3
RET3P53600 YFR012W-AYFR012W-A 87 nt0.7□□□□□ -2.3
RET3P53600 RPL26BYGR034W 384 nt0.7□□□□□ -2.3
RET3P53600 COG8YML071C 1824 nt0.68□□□□□ -2.3
RET3P53600 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
RET3P53600 snR60snR60 104 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)BtF(GAA)B 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)FtF(GAA)F 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)GtF(GAA)G 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)H1tF(GAA)H1 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)H2tF(GAA)H2 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)MtF(GAA)M 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)P1tF(GAA)P1 73 nt0.67□□□□□ -2.3
RET3P53600 tF(GAA)P2tF(GAA)P2 73 nt0.67□□□□□ -2.3
RET3P53600 RPS27BYHR021C 249 nt0.67□□□□□ -2.3
RET3P53600 YMR031W-AYMR031W-A 327 nt0.67□□□□□ -2.3
RET3P53600 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
RET3P53600 CHS6YJL099W 2241 nt0.66□□□□□ -2.3
RET3P53600 YDL240C-AYDL240C-A 138 nt0.66□□□□□ -2.3
RET3P53600 GIM4YEL003W 336 nt0.66□□□□□ -2.3
RET3P53600 YOR218CYOR218C 420 nt0.66□□□□□ -2.3
RET3P53600 snR36snR36 182 nt0.66□□□□□ -2.3
RET3P53600 HTL1YCR020W-B 237 nt0.65□□□□□ -2.31
RET3P53600 YIL032CYIL032C 357 nt0.65□□□□□ -2.31
RET3P53600 CSE2YNR010W 450 nt0.65□□□□□ -2.31
RET3P53600 VIK1YPL253C 1944 nt0.65□□□□□ -2.31
RET3P53600 ASE1YOR058C 2658 nt0.65□□□□□ -2.31
RET3P53600 FMP27YLR454W 7887 nt0.64□□□□□ -2.31
RET3P53600 HMRA1YCR097W 381 nt0.64□□□□□ -2.31
RET3P53600 YHR175W-AYHR175W-A 150 nt0.64□□□□□ -2.31
RET3P53600 YML002WYML002W 2214 nt0.64□□□□□ -2.31
RET3P53600 snR56snR56 88 nt0.63□□□□□ -2.31
RET3P53600 ULP2YIL031W 3105 nt0.62□□□□□ -2.31
RET3P53600 YDR183C-AYDR183C-A 258 nt0.62□□□□□ -2.31
RET3P53600 YGL149WYGL149W 306 nt0.62□□□□□ -2.31
RET3P53600 YCR018C-AYCR018C-A 255 nt0.61□□□□□ -2.31
RET3P53600 YDR354C-AYDR354C-A 144 nt0.61□□□□□ -2.31
RET3P53600 QCR9YGR183C 201 nt0.61□□□□□ -2.31
RET3P53600 SEC8YPR055W 3198 nt0.61□□□□□ -2.31
RET3P53600 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
RET3P53600 YDL185C-AYDL185C-A 228 nt0.6□□□□□ -2.31
RET3P53600 YMR193C-AYMR193C-A 387 nt0.6□□□□□ -2.31
RET3P53600 YFL032WYFL032W 321 nt0.59□□□□□ -2.31
RET3P53600 YAL067W-AYAL067W-A 228 nt0.59□□□□□ -2.31
RET3P53600 FYV10YIL097W 1551 nt0.58□□□□□ -2.32
RET3P53600 ATP6Q0085 780 nt0.58□□□□□ -2.32
RET3P53600 YFL063WYFL063W 456 nt0.58□□□□□ -2.32
RET3P53600 PAU12YGR294W 363 nt0.58□□□□□ -2.32
RET3P53600 snR190snR190 190 nt0.58□□□□□ -2.32
RET3P53600 YPR160W-AYPR160W-A 81 nt0.58□□□□□ -2.32
RET3P53600 COX5BYIL111W 456 nt0.57□□□□□ -2.32
RET3P53600 LTE1YAL024C 4308 nt0.56□□□□□ -2.32
RET3P53600 tR(ACG)Q2tR(ACG)Q2 74 nt0.56□□□□□ -2.32
RET3P53600 YIL134C-AYIL134C-A 204 nt0.56□□□□□ -2.32
RET3P53600 YLR399W-AYLR399W-A 105 nt0.56□□□□□ -2.32
RET3P53600 YMR307C-AYMR307C-A 195 nt0.56□□□□□ -2.32
RET3P53600 YDR413CYDR413C 576 nt0.55□□□□□ -2.32
RET3P53600 YJL127W-AYJL127W-A 117 nt0.55□□□□□ -2.32
RET3P53600 YKL118WYKL118W 312 nt0.55□□□□□ -2.32
RET3P53600 YJL026C-AYJL026C-A 222 nt0.54□□□□□ -2.32
RET3P53600 YKL136WYKL136W 399 nt0.54□□□□□ -2.32
RET3P53600 YNL028WYNL028W 318 nt0.54□□□□□ -2.32
RET3P53600 PRP5YBR237W 2550 nt0.53□□□□□ -2.32
RET3P53600 YKL145W-AYKL145W-A 93 nt0.52□□□□□ -2.33
RET3P53600 OST4YDL232W 111 nt0.51□□□□□ -2.33
RET3P53600 YER097WYER097W 330 nt0.51□□□□□ -2.33
RET3P53600 YJL197C-AYJL197C-A 282 nt0.51□□□□□ -2.33
RET3P53600 RPL39YJL189W 156 nt0.5□□□□□ -2.33
RET3P53600 YLR282CYLR282C 342 nt0.5□□□□□ -2.33
RET3P53600 COY1YKL179C 2040 nt0.5□□□□□ -2.33
RET3P53600 PRP42YDR235W 1635 nt0.49□□□□□ -2.33
RET3P53600 PET111YMR257C 2403 nt0.49□□□□□ -2.33
RET3P53600 YEL020C-BYEL020C-B 198 nt0.49□□□□□ -2.33
RET3P53600 YLL019W-AYLL019W-A 93 nt0.49□□□□□ -2.33
RET3P53600 YOL014WYOL014W 375 nt0.49□□□□□ -2.33
RET3P53600 STE5YDR103W 2754 nt0.49□□□□□ -2.33
RET3P53600 HAL9YOL089C 3093 nt0.49□□□□□ -2.33
RET3P53600 YOR192C-BYOR192C-B 5313 nt0.48□□□□□ -2.33
RET3P53600 tN(GUU)QtN(GUU)Q 71 nt0.47□□□□□ -2.33
RET3P53600 YSP1YHR155W 3687 nt0.47□□□□□ -2.33
RET3P53600 YOR015WYOR015W 360 nt0.46□□□□□ -2.34
RET3P53600 YOR072W-BYOR072W-B 162 nt0.46□□□□□ -2.34
RET3P53600 YPR092WYPR092W 306 nt0.46□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms