Protein–RNA interactions for Protein: P53058

VEL1, Protein VEL1, yeastyeast

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VEL1P53058 RPS27BYHR021C 249 nt0.91□□□□□ -2.26
VEL1P53058 tF(GAA)BtF(GAA)B 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)FtF(GAA)F 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)GtF(GAA)G 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)H1tF(GAA)H1 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)H2tF(GAA)H2 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)MtF(GAA)M 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)P1tF(GAA)P1 73 nt0.9□□□□□ -2.27
VEL1P53058 tF(GAA)P2tF(GAA)P2 73 nt0.9□□□□□ -2.27
VEL1P53058 YIL142C-AYIL142C-A 333 nt0.9□□□□□ -2.27
VEL1P53058 CSE2YNR010W 450 nt0.9□□□□□ -2.27
VEL1P53058 YOR015WYOR015W 360 nt0.9□□□□□ -2.27
VEL1P53058 YOR231C-AYOR231C-A 201 nt0.9□□□□□ -2.27
VEL1P53058 WAR1YML076C 2835 nt0.9□□□□□ -2.27
VEL1P53058 RAD61YDR014W 1944 nt0.89□□□□□ -2.27
VEL1P53058 VAM6YDL077C 3150 nt0.89□□□□□ -2.27
VEL1P53058 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
VEL1P53058 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
VEL1P53058 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
VEL1P53058 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
VEL1P53058 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
VEL1P53058 YLR120W-AYLR120W-A 102 nt0.88□□□□□ -2.27
VEL1P53058 YNL028WYNL028W 318 nt0.88□□□□□ -2.27
VEL1P53058 IES4YOR189W 351 nt0.87□□□□□ -2.27
VEL1P53058 YOR218CYOR218C 420 nt0.87□□□□□ -2.27
VEL1P53058 PRP16YKR086W 3216 nt0.87□□□□□ -2.27
VEL1P53058 YEL020C-BYEL020C-B 198 nt0.86□□□□□ -2.27
VEL1P53058 OLI1Q0130 231 nt0.86□□□□□ -2.27
VEL1P53058 YGR069WYGR069W 336 nt0.86□□□□□ -2.27
VEL1P53058 ECM12YHR021W-A 456 nt0.85□□□□□ -2.27
VEL1P53058 MCM10YIL150C 1716 nt0.85□□□□□ -2.27
VEL1P53058 YOR008C-AYOR008C-A 225 nt0.85□□□□□ -2.27
VEL1P53058 YDL073WYDL073W 2955 nt0.85□□□□□ -2.27
VEL1P53058 ASE1YOR058C 2658 nt0.84□□□□□ -2.27
VEL1P53058 YMR172C-AYMR172C-A 384 nt0.84□□□□□ -2.27
VEL1P53058 SGF11YPL047W 300 nt0.83□□□□□ -2.28
VEL1P53058 SCC2YDR180W 4482 nt0.83□□□□□ -2.28
VEL1P53058 YJR029WYJR029W 5268 nt0.83□□□□□ -2.28
VEL1P53058 YPR137C-BYPR137C-B 5268 nt0.83□□□□□ -2.28
VEL1P53058 NOP9YJL010C 2001 nt0.82□□□□□ -2.28
VEL1P53058 GEA2YEL022W 4380 nt0.82□□□□□ -2.28
VEL1P53058 YDL196WYDL196W 330 nt0.82□□□□□ -2.28
VEL1P53058 YER181CYER181C 324 nt0.82□□□□□ -2.28
VEL1P53058 YGL052WYGL052W 306 nt0.82□□□□□ -2.28
VEL1P53058 YJL026C-AYJL026C-A 222 nt0.82□□□□□ -2.28
VEL1P53058 YJL197C-AYJL197C-A 282 nt0.82□□□□□ -2.28
VEL1P53058 CMC4YMR194C-B 222 nt0.82□□□□□ -2.28
VEL1P53058 YNL211CYNL211C 261 nt0.82□□□□□ -2.28
VEL1P53058 SMC1YFL008W 3678 nt0.82□□□□□ -2.28
VEL1P53058 YPL152W-AYPL152W-A 99 nt0.81□□□□□ -2.28
VEL1P53058 YDR354C-AYDR354C-A 144 nt0.8□□□□□ -2.28
VEL1P53058 ISD11YER048W-A 285 nt0.8□□□□□ -2.28
VEL1P53058 YPL044CYPL044C 549 nt0.79□□□□□ -2.28
VEL1P53058 PAA1YDR071C 576 nt0.78□□□□□ -2.28
VEL1P53058 YFR012W-AYFR012W-A 87 nt0.78□□□□□ -2.28
VEL1P53058 YAL067W-AYAL067W-A 228 nt0.78□□□□□ -2.28
VEL1P53058 YPR092WYPR092W 306 nt0.78□□□□□ -2.28
VEL1P53058 YPR117WYPR117W 7470 nt0.78□□□□□ -2.28
VEL1P53058 PMP1YCR024C-A 123 nt0.77□□□□□ -2.29
VEL1P53058 snR74snR74 88 nt0.77□□□□□ -2.29
VEL1P53058 BFR2YDR299W 1605 nt0.76□□□□□ -2.29
VEL1P53058 YDL185C-AYDL185C-A 228 nt0.76□□□□□ -2.29
VEL1P53058 YOR282WYOR282W 321 nt0.76□□□□□ -2.29
VEL1P53058 UBP3YER151C 2739 nt0.75□□□□□ -2.29
VEL1P53058 YMR160WYMR160W 2451 nt0.75□□□□□ -2.29
VEL1P53058 BUD3YCL014W 4911 nt0.75□□□□□ -2.29
VEL1P53058 YOL014WYOL014W 375 nt0.75□□□□□ -2.29
VEL1P53058 YLL019W-AYLL019W-A 93 nt0.74□□□□□ -2.29
VEL1P53058 DOP1YDR141C 5097 nt0.73□□□□□ -2.29
VEL1P53058 tF(GAA)QtF(GAA)Q 75 nt0.73□□□□□ -2.29
VEL1P53058 RPL26BYGR034W 384 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
VEL1P53058 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
VEL1P53058 snR49snR49 165 nt0.73□□□□□ -2.29
VEL1P53058 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
VEL1P53058 YHR063W-AYHR063W-A 336 nt0.72□□□□□ -2.29
VEL1P53058 YML099W-AYML099W-A 330 nt0.72□□□□□ -2.29
VEL1P53058 YOR072W-BYOR072W-B 162 nt0.72□□□□□ -2.29
VEL1P53058 UTP20YBL004W 7482 nt0.72□□□□□ -2.29
VEL1P53058 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
VEL1P53058 YMR307C-AYMR307C-A 195 nt0.71□□□□□ -2.3
VEL1P53058 RKR1YMR247C 4689 nt0.7□□□□□ -2.3
VEL1P53058 YIR030W-AYIR030W-A 384 nt0.7□□□□□ -2.3
VEL1P53058 HAL9YOL089C 3093 nt0.68□□□□□ -2.3
VEL1P53058 YPR160W-AYPR160W-A 81 nt0.68□□□□□ -2.3
VEL1P53058 SEC8YPR055W 3198 nt0.68□□□□□ -2.3
VEL1P53058 YCR018C-AYCR018C-A 255 nt0.67□□□□□ -2.3
VEL1P53058 snR190snR190 190 nt0.67□□□□□ -2.3
VEL1P53058 NPR2YEL062W 1848 nt0.66□□□□□ -2.3
VEL1P53058 snR55snR55 98 nt0.66□□□□□ -2.3
VEL1P53058 ABF2YMR072W 552 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 44.5 ms