Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 POL5YEL055C 3069 nt1.22□□□□□ -2.21
SHO1P40073 NUP188YML103C 4968 nt1.22□□□□□ -2.21
SHO1P40073 SWI4YER111C 3282 nt1.22□□□□□ -2.21
SHO1P40073 YOR161W-BYOR161W-B 261 nt1.22□□□□□ -2.21
SHO1P40073 YDR354C-AYDR354C-A 144 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)E1tH(GUG)E1 72 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)E2tH(GUG)E2 72 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)G1tH(GUG)G1 72 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)G2tH(GUG)G2 72 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)HtH(GUG)H 72 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)KtH(GUG)K 72 nt1.21□□□□□ -2.22
SHO1P40073 tH(GUG)MtH(GUG)M 72 nt1.21□□□□□ -2.22
SHO1P40073 tQ(UUG)E2tQ(UUG)E2 72 nt1.21□□□□□ -2.22
SHO1P40073 PAM16YJL104W 450 nt1.21□□□□□ -2.22
SHO1P40073 YBR221W-AYBR221W-A 105 nt1.21□□□□□ -2.22
SHO1P40073 STO1YMR125W 2586 nt1.21□□□□□ -2.22
SHO1P40073 APL3YBL037W 3078 nt1.21□□□□□ -2.22
SHO1P40073 YDR406W-AYDR406W-A 246 nt1.2□□□□□ -2.22
SHO1P40073 YDL196WYDL196W 330 nt1.19□□□□□ -2.22
SHO1P40073 ISD11YER048W-A 285 nt1.18□□□□□ -2.22
SHO1P40073 YJL026C-AYJL026C-A 222 nt1.18□□□□□ -2.22
SHO1P40073 YNL097C-BYNL097C-B 123 nt1.18□□□□□ -2.22
SHO1P40073 YBR131C-AYBR131C-A 90 nt1.18□□□□□ -2.22
SHO1P40073 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
SHO1P40073 MSN5YDR335W 3675 nt1.18□□□□□ -2.22
SHO1P40073 OLI1Q0130 231 nt1.17□□□□□ -2.22
SHO1P40073 YIL020C-AYIL020C-A 339 nt1.15□□□□□ -2.23
SHO1P40073 YLL020CYLL020C 306 nt1.15□□□□□ -2.23
SHO1P40073 YOR345CYOR345C 351 nt1.15□□□□□ -2.23
SHO1P40073 NUP145YGL092W 3954 nt1.15□□□□□ -2.23
SHO1P40073 RSM22YKL155C 1887 nt1.14□□□□□ -2.23
SHO1P40073 YDL185C-AYDL185C-A 228 nt1.14□□□□□ -2.23
SHO1P40073 ULI1YFR026C 510 nt1.14□□□□□ -2.23
SHO1P40073 YNL211CYNL211C 261 nt1.14□□□□□ -2.23
SHO1P40073 WAR1YML076C 2835 nt1.14□□□□□ -2.23
SHO1P40073 MSH3YCR092C 3057 nt1.14□□□□□ -2.23
SHO1P40073 YBR200W-AYBR200W-A 165 nt1.13□□□□□ -2.23
SHO1P40073 CDC39YCR093W 6327 nt1.13□□□□□ -2.23
SHO1P40073 YGR130CYGR130C 2451 nt1.13□□□□□ -2.23
SHO1P40073 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
SHO1P40073 YCR018C-AYCR018C-A 255 nt1.12□□□□□ -2.23
SHO1P40073 PAA1YDR071C 576 nt1.12□□□□□ -2.23
SHO1P40073 YNL337WYNL337W 255 nt1.12□□□□□ -2.23
SHO1P40073 STB6YKL072W 2301 nt1.12□□□□□ -2.23
SHO1P40073 APL1YJR005W 2103 nt1.12□□□□□ -2.23
SHO1P40073 YAL067W-AYAL067W-A 228 nt1.11□□□□□ -2.23
SHO1P40073 YEL014CYEL014C 306 nt1.1□□□□□ -2.23
SHO1P40073 SMC1YFL008W 3678 nt1.1□□□□□ -2.23
SHO1P40073 YIL134C-AYIL134C-A 204 nt1.09□□□□□ -2.23
SHO1P40073 CMC4YMR194C-B 222 nt1.09□□□□□ -2.23
SHO1P40073 RPS30BYOR182C 192 nt1.09□□□□□ -2.23
SHO1P40073 RPL33BYOR234C 324 nt1.09□□□□□ -2.23
SHO1P40073 GEA2YEL022W 4380 nt1.09□□□□□ -2.23
SHO1P40073 SEC3YER008C 4011 nt1.09□□□□□ -2.23
SHO1P40073 TTI1YKL033W 3117 nt1.09□□□□□ -2.24
SHO1P40073 NUP157YER105C 4176 nt1.09□□□□□ -2.24
SHO1P40073 NOP9YJL010C 2001 nt1.08□□□□□ -2.24
SHO1P40073 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
SHO1P40073 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
SHO1P40073 HAL9YOL089C 3093 nt1.08□□□□□ -2.24
SHO1P40073 COX12YLR038C 252 nt1.07□□□□□ -2.24
SHO1P40073 snR46snR46 197 nt1.07□□□□□ -2.24
SHO1P40073 YFR012W-AYFR012W-A 87 nt1.05□□□□□ -2.24
SHO1P40073 YNL198CYNL198C 303 nt1.05□□□□□ -2.24
SHO1P40073 ASE1YOR058C 2658 nt1.05□□□□□ -2.24
SHO1P40073 COY1YKL179C 2040 nt1.05□□□□□ -2.24
SHO1P40073 ROM2YLR371W 4071 nt1.04□□□□□ -2.24
SHO1P40073 YJL150WYJL150W 303 nt1.04□□□□□ -2.24
SHO1P40073 YPL044CYPL044C 549 nt1.04□□□□□ -2.24
SHO1P40073 CLU1YMR012W 3834 nt1.03□□□□□ -2.24
SHO1P40073 LAA1YJL207C 6045 nt1.03□□□□□ -2.24
SHO1P40073 SIP4YJL089W 2490 nt1.03□□□□□ -2.25
SHO1P40073 KAP120YPL125W 3099 nt1.02□□□□□ -2.25
SHO1P40073 YCR038W-AYCR038W-A 126 nt1.02□□□□□ -2.25
SHO1P40073 YGL123C-AYGL123C-A 231 nt1.01□□□□□ -2.25
SHO1P40073 YOR161W-AYOR161W-A 81 nt1.01□□□□□ -2.25
SHO1P40073 snR52snR52 92 nt1.01□□□□□ -2.25
SHO1P40073 YNL284C-BYNL284C-B 5268 nt1.01□□□□□ -2.25
SHO1P40073 PMP1YCR024C-A 123 nt1□□□□□ -2.25
SHO1P40073 RPL26BYGR034W 384 nt1□□□□□ -2.25
SHO1P40073 YJL182CYJL182C 318 nt1□□□□□ -2.25
SHO1P40073 IML1YJR138W 4755 nt1□□□□□ -2.25
SHO1P40073 YIL002W-AYIL002W-A 210 nt0.99□□□□□ -2.25
SHO1P40073 YLR282CYLR282C 342 nt0.99□□□□□ -2.25
SHO1P40073 YLR466C-BYLR466C-B 117 nt0.99□□□□□ -2.25
SHO1P40073 YOR225WYOR225W 330 nt0.99□□□□□ -2.25
SHO1P40073 YER053C-AYER053C-A 114 nt0.98□□□□□ -2.25
SHO1P40073 YGL007C-AYGL007C-A 87 nt0.98□□□□□ -2.25
SHO1P40073 YGR151CYGR151C 336 nt0.97□□□□□ -2.25
SHO1P40073 COX5BYIL111W 456 nt0.97□□□□□ -2.25
SHO1P40073 snR190snR190 190 nt0.97□□□□□ -2.25
SHO1P40073 PRP39YML046W 1890 nt0.97□□□□□ -2.25
SHO1P40073 Q0032Q0032 291 nt0.96□□□□□ -2.26
SHO1P40073 BFR2YDR299W 1605 nt0.94□□□□□ -2.26
SHO1P40073 YEL073CYEL073C 324 nt0.94□□□□□ -2.26
SHO1P40073 YKL100W-AYKL100W-A 90 nt0.94□□□□□ -2.26
SHO1P40073 YLR342W-AYLR342W-A 174 nt0.94□□□□□ -2.26
SHO1P40073 SPT7YBR081C 3999 nt0.93□□□□□ -2.26
SHO1P40073 PRP16YKR086W 3216 nt0.93□□□□□ -2.26
SHO1P40073 YML002WYML002W 2214 nt0.93□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 69 ms