Protein–RNA interactions for Protein: P38358

VBA2, Vacuolar basic amino acid transporter 2, yeastyeast

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA2P38358 YJL026C-AYJL026C-A 222 nt1.44□□□□□ -2.18
VBA2P38358 YLR342W-AYLR342W-A 174 nt1.44□□□□□ -2.18
VBA2P38358 PRP39YML046W 1890 nt1.43□□□□□ -2.18
VBA2P38358 BST1YFL025C 3090 nt1.43□□□□□ -2.18
VBA2P38358 TRS65YGR166W 1683 nt1.43□□□□□ -2.18
VBA2P38358 YNL338WYNL338W 159 nt1.43□□□□□ -2.18
VBA2P38358 RPL33BYOR234C 324 nt1.43□□□□□ -2.18
VBA2P38358 TRM732YMR259C 4263 nt1.42□□□□□ -2.18
VBA2P38358 FIG2YCR089W 4830 nt1.41□□□□□ -2.18
VBA2P38358 SET3YKR029C 2256 nt1.41□□□□□ -2.18
VBA2P38358 PAA1YDR071C 576 nt1.41□□□□□ -2.18
VBA2P38358 COA6YMR244C-A 315 nt1.41□□□□□ -2.18
VBA2P38358 YCS4YLR272C 3531 nt1.41□□□□□ -2.18
VBA2P38358 STO1YMR125W 2586 nt1.41□□□□□ -2.18
VBA2P38358 COY1YKL179C 2040 nt1.4□□□□□ -2.18
VBA2P38358 APL1YJR005W 2103 nt1.4□□□□□ -2.18
VBA2P38358 SXM1YDR395W 2835 nt1.4□□□□□ -2.18
VBA2P38358 RPS30BYOR182C 192 nt1.4□□□□□ -2.19
VBA2P38358 YBR221W-AYBR221W-A 105 nt1.4□□□□□ -2.19
VBA2P38358 YIL134C-AYIL134C-A 204 nt1.39□□□□□ -2.19
VBA2P38358 YOR161W-BYOR161W-B 261 nt1.39□□□□□ -2.19
VBA2P38358 BRR2YER172C 6492 nt1.39□□□□□ -2.19
VBA2P38358 HAL9YOL089C 3093 nt1.38□□□□□ -2.19
VBA2P38358 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
VBA2P38358 SWI4YER111C 3282 nt1.38□□□□□ -2.19
VBA2P38358 SMC1YFL008W 3678 nt1.38□□□□□ -2.19
VBA2P38358 POL5YEL055C 3069 nt1.38□□□□□ -2.19
VBA2P38358 PMP1YCR024C-A 123 nt1.38□□□□□ -2.19
VBA2P38358 YNL211CYNL211C 261 nt1.38□□□□□ -2.19
VBA2P38358 NUP188YML103C 4968 nt1.37□□□□□ -2.19
VBA2P38358 YAL067W-AYAL067W-A 228 nt1.37□□□□□ -2.19
VBA2P38358 CHS1YNL192W 3396 nt1.37□□□□□ -2.19
VBA2P38358 APL3YBL037W 3078 nt1.36□□□□□ -2.19
VBA2P38358 COX12YLR038C 252 nt1.36□□□□□ -2.19
VBA2P38358 AZF1YOR113W 2745 nt1.36□□□□□ -2.19
VBA2P38358 CAT8YMR280C 4302 nt1.36□□□□□ -2.19
VBA2P38358 TTI1YKL033W 3117 nt1.35□□□□□ -2.19
VBA2P38358 WAR1YML076C 2835 nt1.34□□□□□ -2.19
VBA2P38358 EST2YLR318W 2655 nt1.34□□□□□ -2.19
VBA2P38358 NUP192YJL039C 5052 nt1.34□□□□□ -2.19
VBA2P38358 YLR422WYLR422W 5799 nt1.34□□□□□ -2.19
VBA2P38358 YCR038W-AYCR038W-A 126 nt1.34□□□□□ -2.19
VBA2P38358 YEL073CYEL073C 324 nt1.34□□□□□ -2.19
VBA2P38358 SSK2YNR031C 4740 nt1.34□□□□□ -2.2
VBA2P38358 SPC110YDR356W 2835 nt1.34□□□□□ -2.2
VBA2P38358 RSM22YKL155C 1887 nt1.33□□□□□ -2.2
VBA2P38358 GEA2YEL022W 4380 nt1.32□□□□□ -2.2
VBA2P38358 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
VBA2P38358 CMC4YMR194C-B 222 nt1.31□□□□□ -2.2
VBA2P38358 YOR381W-AYOR381W-A 168 nt1.31□□□□□ -2.2
VBA2P38358 YBR200W-AYBR200W-A 165 nt1.31□□□□□ -2.2
VBA2P38358 NUP145YGL092W 3954 nt1.31□□□□□ -2.2
VBA2P38358 PIK1YNL267W 3201 nt1.3□□□□□ -2.2
VBA2P38358 EAF1YDR359C 2949 nt1.3□□□□□ -2.2
VBA2P38358 NOP9YJL010C 2001 nt1.29□□□□□ -2.2
VBA2P38358 YPL044CYPL044C 549 nt1.29□□□□□ -2.2
VBA2P38358 SEC21YNL287W 2808 nt1.28□□□□□ -2.2
VBA2P38358 YGL123C-AYGL123C-A 231 nt1.28□□□□□ -2.2
VBA2P38358 YIL002W-AYIL002W-A 210 nt1.28□□□□□ -2.2
VBA2P38358 CDC39YCR093W 6327 nt1.28□□□□□ -2.2
VBA2P38358 CDC31YOR257W 486 nt1.27□□□□□ -2.21
VBA2P38358 PET127YOR017W 2403 nt1.26□□□□□ -2.21
VBA2P38358 YER053C-AYER053C-A 114 nt1.26□□□□□ -2.21
VBA2P38358 YOR161W-AYOR161W-A 81 nt1.26□□□□□ -2.21
VBA2P38358 HKR1YDR420W 5409 nt1.25□□□□□ -2.21
VBA2P38358 YFR012W-AYFR012W-A 87 nt1.25□□□□□ -2.21
VBA2P38358 tQ(UUG)E2tQ(UUG)E2 72 nt1.25□□□□□ -2.21
VBA2P38358 MSN5YDR335W 3675 nt1.25□□□□□ -2.21
VBA2P38358 STB6YKL072W 2301 nt1.24□□□□□ -2.21
VBA2P38358 NUP157YER105C 4176 nt1.24□□□□□ -2.21
VBA2P38358 YDL007C-AYDL007C-A 258 nt1.24□□□□□ -2.21
VBA2P38358 FYV8YGR196C 2454 nt1.24□□□□□ -2.21
VBA2P38358 MSH3YCR092C 3057 nt1.23□□□□□ -2.21
VBA2P38358 COX5BYIL111W 456 nt1.23□□□□□ -2.21
VBA2P38358 YLR282CYLR282C 342 nt1.23□□□□□ -2.21
VBA2P38358 SEC3YER008C 4011 nt1.23□□□□□ -2.21
VBA2P38358 RPL26BYGR034W 384 nt1.22□□□□□ -2.21
VBA2P38358 ASE1YOR058C 2658 nt1.22□□□□□ -2.21
VBA2P38358 YKL100W-AYKL100W-A 90 nt1.21□□□□□ -2.22
VBA2P38358 LAA1YJL207C 6045 nt1.21□□□□□ -2.22
VBA2P38358 PRP42YDR235W 1635 nt1.21□□□□□ -2.22
VBA2P38358 PRP5YBR237W 2550 nt1.21□□□□□ -2.22
VBA2P38358 CDC25YLR310C 4770 nt1.2□□□□□ -2.22
VBA2P38358 BFR2YDR299W 1605 nt1.19□□□□□ -2.22
VBA2P38358 YML002WYML002W 2214 nt1.18□□□□□ -2.22
VBA2P38358 YBL053WYBL053W 375 nt1.18□□□□□ -2.22
VBA2P38358 snR190snR190 190 nt1.18□□□□□ -2.22
VBA2P38358 UTP8YGR128C 2142 nt1.18□□□□□ -2.22
VBA2P38358 RAD9YDR217C 3930 nt1.16□□□□□ -2.22
VBA2P38358 Q0092Q0092 141 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)E1tH(GUG)E1 72 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)E2tH(GUG)E2 72 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)G1tH(GUG)G1 72 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)G2tH(GUG)G2 72 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)HtH(GUG)H 72 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)KtH(GUG)K 72 nt1.16□□□□□ -2.22
VBA2P38358 tH(GUG)MtH(GUG)M 72 nt1.16□□□□□ -2.22
VBA2P38358 ROM2YLR371W 4071 nt1.16□□□□□ -2.22
VBA2P38358 YHL015W-AYHL015W-A 84 nt1.15□□□□□ -2.23
VBA2P38358 YIL020C-AYIL020C-A 339 nt1.15□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 64.8 ms