Protein–RNA interactions for Protein: P38287

CSH1, Mannosyl phosphorylinositol ceramide synthase CSH1, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSH1P38287 YFL012WYFL012W 447 nt-0.19□□□□□ -2.44
CSH1P38287 NIP1YMR309C 2439 nt-0.2□□□□□ -2.44
CSH1P38287 YDL185C-AYDL185C-A 228 nt-0.2□□□□□ -2.44
CSH1P38287 tN(GUU)QtN(GUU)Q 71 nt-0.2□□□□□ -2.44
CSH1P38287 EAF6YJR082C 342 nt-0.2□□□□□ -2.44
CSH1P38287 YML007C-AYML007C-A 111 nt-0.2□□□□□ -2.44
CSH1P38287 SGF11YPL047W 300 nt-0.21□□□□□ -2.44
CSH1P38287 YKU70YMR284W 1809 nt-0.22□□□□□ -2.44
CSH1P38287 YCR018C-AYCR018C-A 255 nt-0.22□□□□□ -2.44
CSH1P38287 YGR174W-AYGR174W-A 87 nt-0.22□□□□□ -2.44
CSH1P38287 YMR307C-AYMR307C-A 195 nt-0.22□□□□□ -2.44
CSH1P38287 YNL319WYNL319W 441 nt-0.22□□□□□ -2.44
CSH1P38287 YOR192C-CYOR192C-C 237 nt-0.22□□□□□ -2.44
CSH1P38287 YER084W-AYER084W-A 513 nt-0.23□□□□□ -2.45
CSH1P38287 YKL123WYKL123W 381 nt-0.23□□□□□ -2.45
CSH1P38287 TAR1YLR154W-C 375 nt-0.23□□□□□ -2.45
CSH1P38287 YPL225WYPL225W 441 nt-0.23□□□□□ -2.45
CSH1P38287 AIM29YKR074W 468 nt-0.24□□□□□ -2.45
CSH1P38287 YAR047CYAR047C 321 nt-0.24□□□□□ -2.45
CSH1P38287 PCF11YDR228C 1881 nt-0.24□□□□□ -2.45
CSH1P38287 COY1YKL179C 2040 nt-0.25□□□□□ -2.45
CSH1P38287 YKL136WYKL136W 399 nt-0.25□□□□□ -2.45
CSH1P38287 FYV7YLR068W 456 nt-0.25□□□□□ -2.45
CSH1P38287 YDR210WYDR210W 228 nt-0.26□□□□□ -2.45
CSH1P38287 YDR426CYDR426C 378 nt-0.26□□□□□ -2.45
CSH1P38287 YHR131W-AYHR131W-A 246 nt-0.26□□□□□ -2.45
CSH1P38287 YAR053WYAR053W 297 nt-0.26□□□□□ -2.45
CSH1P38287 YNL303WYNL303W 348 nt-0.26□□□□□ -2.45
CSH1P38287 SOV1YMR066W 2697 nt-0.26□□□□□ -2.45
CSH1P38287 ISF1YMR081C 1017 nt-0.27□□□□□ -2.45
CSH1P38287 CBS1YDL069C 690 nt-0.29□□□□□ -2.46
CSH1P38287 snR8snR8 190 nt-0.29□□□□□ -2.46
CSH1P38287 TFB5YDR079C-A 219 nt-0.29□□□□□ -2.46
CSH1P38287 RPS25BYLR333C 327 nt-0.29□□□□□ -2.46
CSH1P38287 YHR130CYHR130C 336 nt-0.3□□□□□ -2.46
CSH1P38287 PCC1YKR095W-A 267 nt-0.3□□□□□ -2.46
CSH1P38287 YLL006W-AYLL006W-A 177 nt-0.3□□□□□ -2.46
CSH1P38287 YLR334CYLR334C 381 nt-0.3□□□□□ -2.46
CSH1P38287 YPL068CYPL068C 882 nt-0.3□□□□□ -2.46
CSH1P38287 BUL2YML111W 2763 nt-0.3□□□□□ -2.46
CSH1P38287 YCR022CYCR022C 345 nt-0.31□□□□□ -2.46
CSH1P38287 YLR456WYLR456W 615 nt-0.31□□□□□ -2.46
CSH1P38287 snR54snR54 86 nt-0.31□□□□□ -2.46
CSH1P38287 YJL120WYJL120W 324 nt-0.32□□□□□ -2.46
CSH1P38287 snR128snR128 126 nt-0.32□□□□□ -2.46
CSH1P38287 YEL073CYEL073C 324 nt-0.33□□□□□ -2.46
CSH1P38287 YPR092WYPR092W 306 nt-0.33□□□□□ -2.46
CSH1P38287 PRP39YML046W 1890 nt-0.34□□□□□ -2.46
CSH1P38287 BI2Q0110 1272 nt-0.35□□□□□ -2.47
CSH1P38287 STE18YJR086W 333 nt-0.35□□□□□ -2.47
CSH1P38287 ECL1YGR146C 636 nt-0.36□□□□□ -2.47
CSH1P38287 YHR007C-AYHR007C-A 216 nt-0.36□□□□□ -2.47
CSH1P38287 YLR282CYLR282C 342 nt-0.36□□□□□ -2.47
CSH1P38287 YGR164WYGR164W 336 nt-0.38□□□□□ -2.47
CSH1P38287 SBH2YER019C-A 267 nt-0.39□□□□□ -2.47
CSH1P38287 YHR138CYHR138C 345 nt-0.39□□□□□ -2.47
CSH1P38287 snR46snR46 197 nt-0.39□□□□□ -2.47
CSH1P38287 YER006C-AYER006C-A 318 nt-0.4□□□□□ -2.47
CSH1P38287 YLR101CYLR101C 396 nt-0.41□□□□□ -2.48
CSH1P38287 HTB2YBL002W 396 nt-0.42□□□□□ -2.48
CSH1P38287 CSE1YGL238W 2883 nt-0.42□□□□□ -2.48
CSH1P38287 snR78snR78 87 nt-0.43□□□□□ -2.48
CSH1P38287 YNL122CYNL122C 348 nt-0.43□□□□□ -2.48
CSH1P38287 RAD61YDR014W 1944 nt-0.44□□□□□ -2.48
CSH1P38287 YDR354C-AYDR354C-A 144 nt-0.44□□□□□ -2.48
CSH1P38287 tR(UCU)Q1tR(UCU)Q1 73 nt-0.44□□□□□ -2.48
CSH1P38287 SEC10YLR166C 2616 nt-0.46□□□□□ -2.48
CSH1P38287 SNU13YEL026W 381 nt-0.46□□□□□ -2.48
CSH1P38287 YJL026C-AYJL026C-A 222 nt-0.46□□□□□ -2.48
CSH1P38287 YAR029WYAR029W 225 nt-0.47□□□□□ -2.48
CSH1P38287 YOR161W-AYOR161W-A 81 nt-0.47□□□□□ -2.48
CSH1P38287 YJL007CYJL007C 315 nt-0.48□□□□□ -2.49
CSH1P38287 VPS20YMR077C 666 nt-0.48□□□□□ -2.49
CSH1P38287 snR41snR41 95 nt-0.48□□□□□ -2.49
CSH1P38287 BLI1YKL061W 342 nt-0.49□□□□□ -2.49
CSH1P38287 YNR025CYNR025C 360 nt-0.49□□□□□ -2.49
CSH1P38287 YBR072C-AYBR072C-A 162 nt-0.49□□□□□ -2.49
CSH1P38287 YKL100W-AYKL100W-A 90 nt-0.5□□□□□ -2.49
CSH1P38287 YLR041WYLR041W 321 nt-0.5□□□□□ -2.49
CSH1P38287 YBR099CYBR099C 384 nt-0.5□□□□□ -2.49
CSH1P38287 YGL123C-AYGL123C-A 231 nt-0.51□□□□□ -2.49
CSH1P38287 TOM22YNL131W 459 nt-0.51□□□□□ -2.49
CSH1P38287 YDR366CYDR366C 399 nt-0.52□□□□□ -2.49
CSH1P38287 YEL020C-BYEL020C-B 198 nt-0.52□□□□□ -2.49
CSH1P38287 YMR158W-BYMR158W-B 321 nt-0.52□□□□□ -2.49
CSH1P38287 YJL113WYJL113W 4647 nt-0.52□□□□□ -2.49
CSH1P38287 YPL205CYPL205C 345 nt-0.53□□□□□ -2.49
CSH1P38287 CSN9YDR179C 489 nt-0.54□□□□□ -2.5
CSH1P38287 PRM3YPL192C 402 nt-0.54□□□□□ -2.5
CSH1P38287 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
CSH1P38287 EST1YLR233C 2100 nt-0.56□□□□□ -2.5
CSH1P38287 YPR170W-AYPR170W-A 186 nt-0.56□□□□□ -2.5
CSH1P38287 YIR030W-AYIR030W-A 384 nt-0.57□□□□□ -2.5
CSH1P38287 RPS27BYHR021C 249 nt-0.59□□□□□ -2.5
CSH1P38287 YOL013W-BYOL013W-B 291 nt-0.59□□□□□ -2.5
CSH1P38287 YLR434CYLR434C 384 nt-0.6□□□□□ -2.51
CSH1P38287 CSE2YNR010W 450 nt-0.6□□□□□ -2.51
CSH1P38287 GLG1YKR058W 1851 nt-0.61□□□□□ -2.51
CSH1P38287 YFL063WYFL063W 456 nt-0.61□□□□□ -2.51
CSH1P38287 UTP8YGR128C 2142 nt-0.62□□□□□ -2.51
Retrieved 100 of 7,029 protein–RNA pairs in 46.9 ms