Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 MDS3YGL197W 4464 nt1.74□□□□□ -2.13
TUP1P16649 ADR1YDR216W 3972 nt1.73□□□□□ -2.13
TUP1P16649 PKH3YDR466W 2697 nt1.73□□□□□ -2.13
TUP1P16649 YBR206WYBR206W 324 nt1.72□□□□□ -2.13
TUP1P16649 SBE22YHR103W 2559 nt1.72□□□□□ -2.13
TUP1P16649 SKI3YPR189W 4299 nt1.71□□□□□ -2.13
TUP1P16649 YIL134C-AYIL134C-A 204 nt1.71□□□□□ -2.14
TUP1P16649 SAC3YDR159W 3906 nt1.71□□□□□ -2.14
TUP1P16649 RAD50YNL250W 3939 nt1.71□□□□□ -2.14
TUP1P16649 YDR354C-AYDR354C-A 144 nt1.7□□□□□ -2.14
TUP1P16649 HAL9YOL089C 3093 nt1.7□□□□□ -2.14
TUP1P16649 UFD2YDL190C 2886 nt1.69□□□□□ -2.14
TUP1P16649 TBS1YBR150C 3285 nt1.69□□□□□ -2.14
TUP1P16649 ALY2YJL084C 3141 nt1.68□□□□□ -2.14
TUP1P16649 IRA1YBR140C 9279 nt1.67□□□□□ -2.14
TUP1P16649 RPS30BYOR182C 192 nt1.67□□□□□ -2.14
TUP1P16649 YPL044CYPL044C 549 nt1.67□□□□□ -2.14
TUP1P16649 YCS4YLR272C 3531 nt1.66□□□□□ -2.14
TUP1P16649 KCS1YDR017C 3153 nt1.66□□□□□ -2.14
TUP1P16649 CTF4YPR135W 2784 nt1.66□□□□□ -2.14
TUP1P16649 MMS4YBR098W 2076 nt1.65□□□□□ -2.14
TUP1P16649 YLL054CYLL054C 2532 nt1.65□□□□□ -2.15
TUP1P16649 SLX4YLR135W 2247 nt1.64□□□□□ -2.15
TUP1P16649 YDL206WYDL206W 2289 nt1.64□□□□□ -2.15
TUP1P16649 PAN2YGL094C 3348 nt1.64□□□□□ -2.15
TUP1P16649 YCR038W-AYCR038W-A 126 nt1.64□□□□□ -2.15
TUP1P16649 NUP192YJL039C 5052 nt1.63□□□□□ -2.15
TUP1P16649 YJL026C-AYJL026C-A 222 nt1.63□□□□□ -2.15
TUP1P16649 PAA1YDR071C 576 nt1.62□□□□□ -2.15
TUP1P16649 SNU13YEL026W 381 nt1.62□□□□□ -2.15
TUP1P16649 YJL022WYJL022W 309 nt1.62□□□□□ -2.15
TUP1P16649 COX12YLR038C 252 nt1.62□□□□□ -2.15
TUP1P16649 CAT8YMR280C 4302 nt1.62□□□□□ -2.15
TUP1P16649 SMC4YLR086W 4257 nt1.61□□□□□ -2.15
TUP1P16649 YBR221W-AYBR221W-A 105 nt1.61□□□□□ -2.15
TUP1P16649 APL1YJR005W 2103 nt1.61□□□□□ -2.15
TUP1P16649 tQ(UUG)E2tQ(UUG)E2 72 nt1.6□□□□□ -2.15
TUP1P16649 YHL015W-AYHL015W-A 84 nt1.6□□□□□ -2.15
TUP1P16649 YOR102WYOR102W 351 nt1.6□□□□□ -2.15
TUP1P16649 PET127YOR017W 2403 nt1.59□□□□□ -2.15
TUP1P16649 MON2YNL297C 4911 nt1.58□□□□□ -2.16
TUP1P16649 NUP157YER105C 4176 nt1.58□□□□□ -2.16
TUP1P16649 YER053C-AYER053C-A 114 nt1.57□□□□□ -2.16
TUP1P16649 YOR329W-AYOR329W-A 210 nt1.57□□□□□ -2.16
TUP1P16649 YCL001W-BYCL001W-B 255 nt1.57□□□□□ -2.16
TUP1P16649 PMD1YER132C 5262 nt1.57□□□□□ -2.16
TUP1P16649 FYV8YGR196C 2454 nt1.57□□□□□ -2.16
TUP1P16649 YNL211CYNL211C 261 nt1.56□□□□□ -2.16
TUP1P16649 CDC31YOR257W 486 nt1.56□□□□□ -2.16
TUP1P16649 KAP122YGL016W 3246 nt1.56□□□□□ -2.16
TUP1P16649 TTI1YKL033W 3117 nt1.55□□□□□ -2.16
TUP1P16649 SMC1YFL008W 3678 nt1.55□□□□□ -2.16
TUP1P16649 snR14snR14 160 nt1.55□□□□□ -2.16
TUP1P16649 MEC1YBR136W 7107 nt1.55□□□□□ -2.16
TUP1P16649 YAR009CYAR009C 3591 nt1.55□□□□□ -2.16
TUP1P16649 YOR314W-AYOR314W-A 111 nt1.54□□□□□ -2.16
TUP1P16649 POL5YEL055C 3069 nt1.54□□□□□ -2.16
TUP1P16649 BST1YFL025C 3090 nt1.54□□□□□ -2.16
TUP1P16649 RSM22YKL155C 1887 nt1.54□□□□□ -2.16
TUP1P16649 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
TUP1P16649 YIL002W-AYIL002W-A 210 nt1.53□□□□□ -2.16
TUP1P16649 YAL067W-AYAL067W-A 228 nt1.53□□□□□ -2.16
TUP1P16649 YOR019WYOR019W 2193 nt1.52□□□□□ -2.17
TUP1P16649 YFR012W-AYFR012W-A 87 nt1.52□□□□□ -2.17
TUP1P16649 YNL284C-BYNL284C-B 5268 nt1.51□□□□□ -2.17
TUP1P16649 PRP5YBR237W 2550 nt1.51□□□□□ -2.17
TUP1P16649 tL(UAA)QtL(UAA)Q 85 nt1.51□□□□□ -2.17
TUP1P16649 CHS1YNL192W 3396 nt1.5□□□□□ -2.17
TUP1P16649 SET3YKR029C 2256 nt1.5□□□□□ -2.17
TUP1P16649 STO1YMR125W 2586 nt1.5□□□□□ -2.17
TUP1P16649 SWI4YER111C 3282 nt1.49□□□□□ -2.17
TUP1P16649 EAF1YDR359C 2949 nt1.49□□□□□ -2.17
TUP1P16649 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
TUP1P16649 ROM2YLR371W 4071 nt1.48□□□□□ -2.17
TUP1P16649 YKL100W-AYKL100W-A 90 nt1.47□□□□□ -2.17
TUP1P16649 CDC25YLR310C 4770 nt1.46□□□□□ -2.18
TUP1P16649 PIK1YNL267W 3201 nt1.46□□□□□ -2.18
TUP1P16649 NUP145YGL092W 3954 nt1.46□□□□□ -2.18
TUP1P16649 YGL123C-AYGL123C-A 231 nt1.46□□□□□ -2.18
TUP1P16649 CLU1YMR012W 3834 nt1.46□□□□□ -2.18
TUP1P16649 YOR161W-AYOR161W-A 81 nt1.46□□□□□ -2.18
TUP1P16649 AZF1YOR113W 2745 nt1.46□□□□□ -2.18
TUP1P16649 WAR1YML076C 2835 nt1.45□□□□□ -2.18
TUP1P16649 HKR1YDR420W 5409 nt1.45□□□□□ -2.18
TUP1P16649 APL3YBL037W 3078 nt1.45□□□□□ -2.18
TUP1P16649 EST2YLR318W 2655 nt1.44□□□□□ -2.18
TUP1P16649 YDR524C-AYDR524C-A 120 nt1.44□□□□□ -2.18
TUP1P16649 YIL071W-AYIL071W-A 477 nt1.44□□□□□ -2.18
TUP1P16649 CMC4YMR194C-B 222 nt1.44□□□□□ -2.18
TUP1P16649 YBL109WYBL109W 336 nt1.44□□□□□ -2.18
TUP1P16649 YBR200W-AYBR200W-A 165 nt1.44□□□□□ -2.18
TUP1P16649 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
TUP1P16649 SXM1YDR395W 2835 nt1.44□□□□□ -2.18
TUP1P16649 YGL182CYGL182C 324 nt1.43□□□□□ -2.18
TUP1P16649 NOP9YJL010C 2001 nt1.43□□□□□ -2.18
TUP1P16649 BFR2YDR299W 1605 nt1.42□□□□□ -2.18
TUP1P16649 LAA1YJL207C 6045 nt1.41□□□□□ -2.18
TUP1P16649 TRM732YMR259C 4263 nt1.41□□□□□ -2.18
TUP1P16649 YBR178WYBR178W 375 nt1.41□□□□□ -2.18
TUP1P16649 CHS6YJL099W 2241 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 48.2 ms