Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 PAA1YDR071C 576 nt-1.48□□□□□ -2.65
TY1B-DR4Q07793 YDL007C-AYDL007C-A 258 nt-1.48□□□□□ -2.65
TY1B-DR4Q07793 YKL115CYKL115C 393 nt-1.48□□□□□ -2.65
TY1B-DR4Q07793 LSO2YGR169C-A 279 nt-1.49□□□□□ -2.65
TY1B-DR4Q07793 PFS1YHR185C 714 nt-1.49□□□□□ -2.65
TY1B-DR4Q07793 MRPL31YKL138C 396 nt-1.5□□□□□ -2.65
TY1B-DR4Q07793 SKI7YOR076C 2244 nt-1.51□□□□□ -2.65
TY1B-DR4Q07793 YMR158C-AYMR158C-A 138 nt-1.51□□□□□ -2.65
TY1B-DR4Q07793 RUB1YDR139C 234 nt-1.51□□□□□ -2.65
TY1B-DR4Q07793 QCR7YDR529C 384 nt-1.52□□□□□ -2.65
TY1B-DR4Q07793 GOS1YHL031C 672 nt-1.53□□□□□ -2.65
TY1B-DR4Q07793 YAP6YDR259C 1152 nt-1.54□□□□□ -2.66
TY1B-DR4Q07793 CMC1YKL137W 336 nt-1.54□□□□□ -2.66
TY1B-DR4Q07793 RSM23YGL129C 1353 nt-1.54□□□□□ -2.66
TY1B-DR4Q07793 YHL046W-AYHL046W-A 327 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 POL32YJR043C 1053 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 SMD2YLR275W 333 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 YPL119C-AYPL119C-A 264 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 ZIP2YGL249W 2115 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 YGL258W-AYGL258W-A 234 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 YMR290W-AYMR290W-A 348 nt-1.55□□□□□ -2.66
TY1B-DR4Q07793 tN(GUU)QtN(GUU)Q 71 nt-1.56□□□□□ -2.66
TY1B-DR4Q07793 RPF1YHR088W 888 nt-1.56□□□□□ -2.66
TY1B-DR4Q07793 YIL066W-AYIL066W-A 444 nt-1.56□□□□□ -2.66
TY1B-DR4Q07793 YPR099CYPR099C 357 nt-1.57□□□□□ -2.66
TY1B-DR4Q07793 YLR146W-AYLR146W-A 189 nt-1.58□□□□□ -2.66
TY1B-DR4Q07793 YER079WYER079W 633 nt-1.59□□□□□ -2.66
TY1B-DR4Q07793 YIL032CYIL032C 357 nt-1.59□□□□□ -2.66
TY1B-DR4Q07793 tY(GUA)QtY(GUA)Q 84 nt-1.59□□□□□ -2.66
TY1B-DR4Q07793 YLR198CYLR198C 360 nt-1.59□□□□□ -2.66
TY1B-DR4Q07793 YPR142CYPR142C 564 nt-1.59□□□□□ -2.66
TY1B-DR4Q07793 YJL135WYJL135W 318 nt-1.6□□□□□ -2.67
TY1B-DR4Q07793 CMS1YLR003C 876 nt-1.6□□□□□ -2.67
TY1B-DR4Q07793 YMR153C-AYMR153C-A 336 nt-1.6□□□□□ -2.67
TY1B-DR4Q07793 ATP20YPR020W 348 nt-1.6□□□□□ -2.67
TY1B-DR4Q07793 YER158W-AYER158W-A 216 nt-1.61□□□□□ -2.67
TY1B-DR4Q07793 PSF2YJL072C 642 nt-1.61□□□□□ -2.67
TY1B-DR4Q07793 RPL29YFR032C-A 180 nt-1.62□□□□□ -2.67
TY1B-DR4Q07793 YBR099CYBR099C 384 nt-1.62□□□□□ -2.67
TY1B-DR4Q07793 tP(UGG)QtP(UGG)Q 72 nt-1.62□□□□□ -2.67
TY1B-DR4Q07793 ATG31YDR022C 591 nt-1.63□□□□□ -2.67
TY1B-DR4Q07793 YOL160WYOL160W 342 nt-1.63□□□□□ -2.67
TY1B-DR4Q07793 PAN3YKL025C 2040 nt-1.64□□□□□ -2.67
TY1B-DR4Q07793 15S_rRNA15S_rRNA 1649 nt-1.64□□□□□ -2.67
TY1B-DR4Q07793 YER076W-AYER076W-A 348 nt-1.64□□□□□ -2.67
TY1B-DR4Q07793 SDS22YKL193C 1017 nt-1.64□□□□□ -2.67
TY1B-DR4Q07793 YBL008W-AYBL008W-A 240 nt-1.66□□□□□ -2.67
TY1B-DR4Q07793 YBL062WYBL062W 381 nt-1.66□□□□□ -2.67
TY1B-DR4Q07793 YOR161W-AYOR161W-A 81 nt-1.66□□□□□ -2.67
TY1B-DR4Q07793 YCR024C-BYCR024C-B 267 nt-1.66□□□□□ -2.68
TY1B-DR4Q07793 YJL077W-AYJL077W-A 87 nt-1.66□□□□□ -2.68
TY1B-DR4Q07793 PBI2YNL015W 228 nt-1.66□□□□□ -2.68
TY1B-DR4Q07793 YBR126W-BYBR126W-B 144 nt-1.66□□□□□ -2.68
TY1B-DR4Q07793 YGL042CYGL042C 306 nt-1.67□□□□□ -2.68
TY1B-DR4Q07793 PCF11YDR228C 1881 nt-1.68□□□□□ -2.68
TY1B-DR4Q07793 BNS1YGR230W 414 nt-1.69□□□□□ -2.68
TY1B-DR4Q07793 GPX1YKL026C 504 nt-1.69□□□□□ -2.68
TY1B-DR4Q07793 YLR041WYLR041W 321 nt-1.69□□□□□ -2.68
TY1B-DR4Q07793 snR79snR79 84 nt-1.71□□□□□ -2.68
TY1B-DR4Q07793 YLR171WYLR171W 390 nt-1.71□□□□□ -2.68
TY1B-DR4Q07793 YMR254CYMR254C 309 nt-1.71□□□□□ -2.68
TY1B-DR4Q07793 YMR307C-AYMR307C-A 195 nt-1.71□□□□□ -2.68
TY1B-DR4Q07793 YER138W-AYER138W-A 105 nt-1.72□□□□□ -2.68
TY1B-DR4Q07793 YHL041WYHL041W 450 nt-1.72□□□□□ -2.68
TY1B-DR4Q07793 YOL029CYOL029C 606 nt-1.72□□□□□ -2.68
TY1B-DR4Q07793 YJL086CYJL086C 369 nt-1.73□□□□□ -2.69
TY1B-DR4Q07793 SNU13YEL026W 381 nt-1.74□□□□□ -2.69
TY1B-DR4Q07793 YKL068W-AYKL068W-A 237 nt-1.74□□□□□ -2.69
TY1B-DR4Q07793 YGR204C-AYGR204C-A 114 nt-1.75□□□□□ -2.69
TY1B-DR4Q07793 YML100W-AYML100W-A 174 nt-1.75□□□□□ -2.69
TY1B-DR4Q07793 YNL162W-AYNL162W-A 219 nt-1.76□□□□□ -2.69
TY1B-DR4Q07793 RRI2YOL117W 1938 nt-1.77□□□□□ -2.69
TY1B-DR4Q07793 YML108WYML108W 318 nt-1.77□□□□□ -2.69
TY1B-DR4Q07793 DCP1YOL149W 696 nt-1.77□□□□□ -2.69
TY1B-DR4Q07793 APQ12YIL040W 417 nt-1.78□□□□□ -2.69
TY1B-DR4Q07793 RPS10BYMR230W 318 nt-1.78□□□□□ -2.69
TY1B-DR4Q07793 YGL182CYGL182C 324 nt-1.79□□□□□ -2.7
TY1B-DR4Q07793 PAU9YBL108C-A 129 nt-1.79□□□□□ -2.7
TY1B-DR4Q07793 YCR100CYCR100C 951 nt-1.8□□□□□ -2.7
TY1B-DR4Q07793 RSM18YER050C 417 nt-1.8□□□□□ -2.7
TY1B-DR4Q07793 YDL185C-AYDL185C-A 228 nt-1.84□□□□□ -2.7
TY1B-DR4Q07793 YJL182CYJL182C 318 nt-1.84□□□□□ -2.7
TY1B-DR4Q07793 snR24snR24 89 nt-1.84□□□□□ -2.7
TY1B-DR4Q07793 YIR044CYIR044C 186 nt-1.84□□□□□ -2.7
TY1B-DR4Q07793 YPL068CYPL068C 882 nt-1.84□□□□□ -2.7
TY1B-DR4Q07793 YDR269CYDR269C 324 nt-1.87□□□□□ -2.71
TY1B-DR4Q07793 YJR140W-AYJR140W-A 150 nt-1.87□□□□□ -2.71
TY1B-DR4Q07793 YPL261CYPL261C 309 nt-1.87□□□□□ -2.71
TY1B-DR4Q07793 SDH7YDR511W 402 nt-1.88□□□□□ -2.71
TY1B-DR4Q07793 YGR228WYGR228W 345 nt-1.88□□□□□ -2.71
TY1B-DR4Q07793 YIL002W-AYIL002W-A 210 nt-1.88□□□□□ -2.71
TY1B-DR4Q07793 YJL020W-AYJL020W-A 258 nt-1.88□□□□□ -2.71
TY1B-DR4Q07793 AGA2YGL032C 264 nt-1.89□□□□□ -2.71
TY1B-DR4Q07793 YOL166W-AYOL166W-A 156 nt-1.89□□□□□ -2.71
TY1B-DR4Q07793 YER084W-AYER084W-A 513 nt-1.9□□□□□ -2.71
TY1B-DR4Q07793 LRP1YHR081W 555 nt-1.9□□□□□ -2.71
TY1B-DR4Q07793 PET20YPL159C 762 nt-1.91□□□□□ -2.71
TY1B-DR4Q07793 YDR543CYDR543C 300 nt-1.91□□□□□ -2.72
TY1B-DR4Q07793 PMP2YEL017C-A 132 nt-1.91□□□□□ -2.72
TY1B-DR4Q07793 YAL068W-AYAL068W-A 255 nt-1.91□□□□□ -2.72
Retrieved 100 of 7,029 protein–RNA pairs in 234.3 ms