Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 YJL007CYJL007C 315 nt0.7□□□□□ -2.3
BER1Q06688 BFR2YDR299W 1605 nt0.69□□□□□ -2.3
BER1Q06688 YJR011CYJR011C 786 nt0.69□□□□□ -2.3
BER1Q06688 TTI1YKL033W 3117 nt0.69□□□□□ -2.3
BER1Q06688 YLR406C-AYLR406C-A 150 nt0.68□□□□□ -2.3
BER1Q06688 YOR282WYOR282W 321 nt0.68□□□□□ -2.3
BER1Q06688 YPL185WYPL185W 396 nt0.68□□□□□ -2.3
BER1Q06688 YLL007CYLL007C 1998 nt0.67□□□□□ -2.3
BER1Q06688 YDR521WYDR521W 336 nt0.67□□□□□ -2.3
BER1Q06688 RPL38YLR325C 237 nt0.67□□□□□ -2.3
BER1Q06688 YML007C-AYML007C-A 111 nt0.67□□□□□ -2.3
BER1Q06688 YBR064WYBR064W 429 nt0.67□□□□□ -2.3
BER1Q06688 YPR002C-AYPR002C-A 198 nt0.67□□□□□ -2.3
BER1Q06688 UBP3YER151C 2739 nt0.66□□□□□ -2.3
BER1Q06688 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
BER1Q06688 YLR434CYLR434C 384 nt0.65□□□□□ -2.31
BER1Q06688 YBR206WYBR206W 324 nt0.65□□□□□ -2.31
BER1Q06688 NOP9YJL010C 2001 nt0.64□□□□□ -2.31
BER1Q06688 PMP1YCR024C-A 123 nt0.64□□□□□ -2.31
BER1Q06688 YDR344CYDR344C 444 nt0.64□□□□□ -2.31
BER1Q06688 YCK3YER123W 1575 nt0.63□□□□□ -2.31
BER1Q06688 YHR063W-AYHR063W-A 336 nt0.63□□□□□ -2.31
BER1Q06688 YKL063CYKL063C 504 nt0.63□□□□□ -2.31
BER1Q06688 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
BER1Q06688 YPL205CYPL205C 345 nt0.63□□□□□ -2.31
BER1Q06688 Q0017Q0017 162 nt0.63□□□□□ -2.31
BER1Q06688 PTP2YOR208W 2253 nt0.63□□□□□ -2.31
BER1Q06688 NHP2YDL208W 471 nt0.62□□□□□ -2.31
BER1Q06688 YMR031W-AYMR031W-A 327 nt0.62□□□□□ -2.31
BER1Q06688 YPR159C-AYPR159C-A 102 nt0.62□□□□□ -2.31
BER1Q06688 YDR426CYDR426C 378 nt0.61□□□□□ -2.31
BER1Q06688 MCM10YIL150C 1716 nt0.61□□□□□ -2.31
BER1Q06688 OLI1Q0130 231 nt0.6□□□□□ -2.31
BER1Q06688 ECM12YHR021W-A 456 nt0.6□□□□□ -2.31
BER1Q06688 YOR072W-AYOR072W-A 249 nt0.6□□□□□ -2.31
BER1Q06688 YPL044CYPL044C 549 nt0.6□□□□□ -2.31
BER1Q06688 CHS6YJL099W 2241 nt0.59□□□□□ -2.31
BER1Q06688 LTE1YAL024C 4308 nt0.59□□□□□ -2.32
BER1Q06688 YLR202CYLR202C 327 nt0.58□□□□□ -2.32
BER1Q06688 NPR2YEL062W 1848 nt0.57□□□□□ -2.32
BER1Q06688 PCC1YKR095W-A 267 nt0.57□□□□□ -2.32
BER1Q06688 CMC4YMR194C-B 222 nt0.57□□□□□ -2.32
BER1Q06688 PRM3YPL192C 402 nt0.56□□□□□ -2.32
BER1Q06688 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
BER1Q06688 ASE1YOR058C 2658 nt0.55□□□□□ -2.32
BER1Q06688 BSC3YLR465C 309 nt0.54□□□□□ -2.32
BER1Q06688 VPS20YMR077C 666 nt0.54□□□□□ -2.32
BER1Q06688 YPL068CYPL068C 882 nt0.54□□□□□ -2.32
BER1Q06688 YML002WYML002W 2214 nt0.54□□□□□ -2.32
BER1Q06688 PAM16YJL104W 450 nt0.53□□□□□ -2.32
BER1Q06688 YOR053WYOR053W 342 nt0.53□□□□□ -2.32
BER1Q06688 YER079WYER079W 633 nt0.52□□□□□ -2.33
BER1Q06688 YNL324WYNL324W 396 nt0.52□□□□□ -2.33
BER1Q06688 HMRA2YCR096C 360 nt0.51□□□□□ -2.33
BER1Q06688 PAA1YDR071C 576 nt0.51□□□□□ -2.33
BER1Q06688 CSN9YDR179C 489 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)BtT(AGU)B 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)CtT(AGU)C 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)DtT(AGU)D 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)HtT(AGU)H 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)I1tT(AGU)I1 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)I2tT(AGU)I2 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)JtT(AGU)J 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)N1tT(AGU)N1 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)N2tT(AGU)N2 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)O1tT(AGU)O1 73 nt0.51□□□□□ -2.33
BER1Q06688 tT(AGU)O2tT(AGU)O2 73 nt0.51□□□□□ -2.33
BER1Q06688 YLR334CYLR334C 381 nt0.51□□□□□ -2.33
BER1Q06688 SPO21YOL091W 1830 nt0.51□□□□□ -2.33
BER1Q06688 YOR032W-AYOR032W-A 201 nt0.51□□□□□ -2.33
BER1Q06688 YBR285WYBR285W 435 nt0.51□□□□□ -2.33
BER1Q06688 YFR012W-AYFR012W-A 87 nt0.5□□□□□ -2.33
BER1Q06688 AGA2YGL032C 264 nt0.5□□□□□ -2.33
BER1Q06688 ANS1YHR126C 480 nt0.5□□□□□ -2.33
BER1Q06688 YJR157WYJR157W 363 nt0.5□□□□□ -2.33
BER1Q06688 YOR011W-AYOR011W-A 207 nt0.5□□□□□ -2.33
BER1Q06688 YOR218CYOR218C 420 nt0.5□□□□□ -2.33
BER1Q06688 YNL211CYNL211C 261 nt0.49□□□□□ -2.33
BER1Q06688 YER137W-AYER137W-A 306 nt0.48□□□□□ -2.33
BER1Q06688 FYV10YIL097W 1551 nt0.48□□□□□ -2.33
BER1Q06688 RPL26BYGR034W 384 nt0.47□□□□□ -2.33
BER1Q06688 YSP1YHR155W 3687 nt0.47□□□□□ -2.33
BER1Q06688 OST1YJL002C 1431 nt0.47□□□□□ -2.33
BER1Q06688 YHR138CYHR138C 345 nt0.46□□□□□ -2.34
BER1Q06688 YIL134C-AYIL134C-A 204 nt0.46□□□□□ -2.34
BER1Q06688 YJL120WYJL120W 324 nt0.46□□□□□ -2.34
BER1Q06688 YLR264C-AYLR264C-A 117 nt0.46□□□□□ -2.34
BER1Q06688 YOR121CYOR121C 306 nt0.46□□□□□ -2.34
BER1Q06688 RPS25BYLR333C 327 nt0.45□□□□□ -2.34
BER1Q06688 YPL225WYPL225W 441 nt0.45□□□□□ -2.34
BER1Q06688 YAR029WYAR029W 225 nt0.44□□□□□ -2.34
BER1Q06688 TAR1YLR154W-C 375 nt0.44□□□□□ -2.34
BER1Q06688 YJL127W-AYJL127W-A 117 nt0.43□□□□□ -2.34
BER1Q06688 YPR160W-AYPR160W-A 81 nt0.43□□□□□ -2.34
BER1Q06688 YHL046W-AYHL046W-A 327 nt0.42□□□□□ -2.34
BER1Q06688 SGF11YPL047W 300 nt0.42□□□□□ -2.34
BER1Q06688 SEC8YPR055W 3198 nt0.41□□□□□ -2.34
BER1Q06688 PRP5YBR237W 2550 nt0.41□□□□□ -2.34
BER1Q06688 YMR001C-AYMR001C-A 231 nt0.41□□□□□ -2.34
BER1Q06688 LEE1YPL054W 906 nt0.41□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms