Protein–RNA interactions for Protein: P40018

SMB1, Small nuclear ribonucleoprotein-associated protein B, yeastyeast

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMB1P40018 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
SMB1P40018 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
SMB1P40018 YLR101CYLR101C 396 nt0.59□□□□□ -2.31
SMB1P40018 YAR047CYAR047C 321 nt0.59□□□□□ -2.31
SMB1P40018 RKR1YMR247C 4689 nt0.58□□□□□ -2.32
SMB1P40018 CBS1YDL069C 690 nt0.58□□□□□ -2.32
SMB1P40018 ECM12YHR021W-A 456 nt0.58□□□□□ -2.32
SMB1P40018 RPS30BYOR182C 192 nt0.58□□□□□ -2.32
SMB1P40018 snR41snR41 95 nt0.58□□□□□ -2.32
SMB1P40018 YDL073WYDL073W 2955 nt0.57□□□□□ -2.32
SMB1P40018 YGR174W-AYGR174W-A 87 nt0.57□□□□□ -2.32
SMB1P40018 YIL142C-AYIL142C-A 333 nt0.57□□□□□ -2.32
SMB1P40018 YLL007CYLL007C 1998 nt0.57□□□□□ -2.32
SMB1P40018 OST1YJL002C 1431 nt0.56□□□□□ -2.32
SMB1P40018 PTP2YOR208W 2253 nt0.56□□□□□ -2.32
SMB1P40018 PCF11YDR228C 1881 nt0.56□□□□□ -2.32
SMB1P40018 BFR2YDR299W 1605 nt0.56□□□□□ -2.32
SMB1P40018 TOM22YNL131W 459 nt0.55□□□□□ -2.32
SMB1P40018 PMP1YCR024C-A 123 nt0.54□□□□□ -2.32
SMB1P40018 YAP6YDR259C 1152 nt0.54□□□□□ -2.32
SMB1P40018 YEL030C-AYEL030C-A 315 nt0.54□□□□□ -2.32
SMB1P40018 INA22YIR024C 651 nt0.54□□□□□ -2.32
SMB1P40018 YOR072W-AYOR072W-A 249 nt0.54□□□□□ -2.32
SMB1P40018 YDR344CYDR344C 444 nt0.53□□□□□ -2.32
SMB1P40018 MAM33YIL070C 801 nt0.53□□□□□ -2.32
SMB1P40018 RPL26AYLR344W 384 nt0.53□□□□□ -2.32
SMB1P40018 YBL008W-AYBL008W-A 240 nt0.53□□□□□ -2.32
SMB1P40018 YNL303WYNL303W 348 nt0.53□□□□□ -2.32
SMB1P40018 YPL044CYPL044C 549 nt0.53□□□□□ -2.32
SMB1P40018 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
SMB1P40018 NPR2YEL062W 1848 nt0.52□□□□□ -2.33
SMB1P40018 RPL38YLR325C 237 nt0.52□□□□□ -2.33
SMB1P40018 MRPL50YNR022C 420 nt0.52□□□□□ -2.33
SMB1P40018 NOP9YJL010C 2001 nt0.52□□□□□ -2.33
SMB1P40018 YML002WYML002W 2214 nt0.52□□□□□ -2.33
SMB1P40018 ATG31YDR022C 591 nt0.51□□□□□ -2.33
SMB1P40018 RPS20YHL015W 366 nt0.51□□□□□ -2.33
SMB1P40018 UBC7YMR022W 498 nt0.51□□□□□ -2.33
SMB1P40018 tF(GAA)BtF(GAA)B 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)FtF(GAA)F 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)GtF(GAA)G 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)H1tF(GAA)H1 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)H2tF(GAA)H2 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)MtF(GAA)M 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)P1tF(GAA)P1 73 nt0.5□□□□□ -2.33
SMB1P40018 tF(GAA)P2tF(GAA)P2 73 nt0.5□□□□□ -2.33
SMB1P40018 ISF1YMR081C 1017 nt0.5□□□□□ -2.33
SMB1P40018 LTE1YAL024C 4308 nt0.5□□□□□ -2.33
SMB1P40018 PRP16YKR086W 3216 nt0.49□□□□□ -2.33
SMB1P40018 OLI1Q0130 231 nt0.49□□□□□ -2.33
SMB1P40018 YML007C-AYML007C-A 111 nt0.49□□□□□ -2.33
SMB1P40018 YPL185WYPL185W 396 nt0.49□□□□□ -2.33
SMB1P40018 YBR064WYBR064W 429 nt0.49□□□□□ -2.33
SMB1P40018 YCK3YER123W 1575 nt0.49□□□□□ -2.33
SMB1P40018 YJR011CYJR011C 786 nt0.48□□□□□ -2.33
SMB1P40018 YPR002C-AYPR002C-A 198 nt0.48□□□□□ -2.33
SMB1P40018 CHS6YJL099W 2241 nt0.48□□□□□ -2.33
SMB1P40018 YOR218CYOR218C 420 nt0.47□□□□□ -2.33
SMB1P40018 SPO21YOL091W 1830 nt0.46□□□□□ -2.34
SMB1P40018 BSC3YLR465C 309 nt0.46□□□□□ -2.34
SMB1P40018 ATP19YOL077W-A 207 nt0.46□□□□□ -2.34
SMB1P40018 NIP100YPL174C 2607 nt0.46□□□□□ -2.34
SMB1P40018 PAA1YDR071C 576 nt0.45□□□□□ -2.34
SMB1P40018 RPS24BYIL069C 408 nt0.45□□□□□ -2.34
SMB1P40018 YKL145W-AYKL145W-A 93 nt0.45□□□□□ -2.34
SMB1P40018 YOR032W-AYOR032W-A 201 nt0.45□□□□□ -2.34
SMB1P40018 YBR206WYBR206W 324 nt0.45□□□□□ -2.34
SMB1P40018 MCM10YIL150C 1716 nt0.44□□□□□ -2.34
SMB1P40018 YLR456WYLR456W 615 nt0.44□□□□□ -2.34
SMB1P40018 YMR160WYMR160W 2451 nt0.43□□□□□ -2.34
SMB1P40018 YIL134C-AYIL134C-A 204 nt0.43□□□□□ -2.34
SMB1P40018 YDR426CYDR426C 378 nt0.42□□□□□ -2.34
SMB1P40018 RPL26BYGR034W 384 nt0.41□□□□□ -2.34
SMB1P40018 QCR9YGR183C 201 nt0.41□□□□□ -2.34
SMB1P40018 PAU12YGR294W 363 nt0.41□□□□□ -2.34
SMB1P40018 PCC1YKR095W-A 267 nt0.41□□□□□ -2.34
SMB1P40018 YOL014WYOL014W 375 nt0.4□□□□□ -2.35
SMB1P40018 HMRA2YCR096C 360 nt0.38□□□□□ -2.35
SMB1P40018 YJL127W-AYJL127W-A 117 nt0.38□□□□□ -2.35
SMB1P40018 MLP1YKR095W 5628 nt0.37□□□□□ -2.35
SMB1P40018 FYV10YIL097W 1551 nt0.36□□□□□ -2.35
SMB1P40018 YJL007CYJL007C 315 nt0.36□□□□□ -2.35
SMB1P40018 YKL063CYKL063C 504 nt0.36□□□□□ -2.35
SMB1P40018 YOR053WYOR053W 342 nt0.36□□□□□ -2.35
SMB1P40018 PET111YMR257C 2403 nt0.36□□□□□ -2.35
SMB1P40018 SEC8YPR055W 3198 nt0.35□□□□□ -2.35
SMB1P40018 YOR011W-AYOR011W-A 207 nt0.35□□□□□ -2.35
SMB1P40018 YPL068CYPL068C 882 nt0.35□□□□□ -2.35
SMB1P40018 YLR406C-AYLR406C-A 150 nt0.34□□□□□ -2.36
SMB1P40018 TRS65YGR166W 1683 nt0.33□□□□□ -2.36
SMB1P40018 SBH1YER087C-B 249 nt0.33□□□□□ -2.36
SMB1P40018 YNL211CYNL211C 261 nt0.33□□□□□ -2.36
SMB1P40018 BEM3YPL115C 3387 nt0.32□□□□□ -2.36
SMB1P40018 YFR012W-AYFR012W-A 87 nt0.32□□□□□ -2.36
SMB1P40018 COX5BYIL111W 456 nt0.32□□□□□ -2.36
SMB1P40018 YLR434CYLR434C 384 nt0.32□□□□□ -2.36
SMB1P40018 VIK1YPL253C 1944 nt0.32□□□□□ -2.36
SMB1P40018 YLR399W-AYLR399W-A 105 nt0.31□□□□□ -2.36
SMB1P40018 VPS20YMR077C 666 nt0.31□□□□□ -2.36
SMB1P40018 YPR160W-AYPR160W-A 81 nt0.31□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms