Protein–RNA interactions for Protein: P39109

YCF1, Metal resistance protein YCF1, yeastyeast

Known RBP Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCF1P39109 POL32YJR043C 1053 nt-1.7□□□□□ -2.68
YCF1P39109 YPL119C-AYPL119C-A 264 nt-1.7□□□□□ -2.68
YCF1P39109 GPX1YKL026C 504 nt-1.71□□□□□ -2.68
YCF1P39109 SUT2YPR009W 807 nt-1.71□□□□□ -2.68
YCF1P39109 tN(GUU)QtN(GUU)Q 71 nt-1.71□□□□□ -2.68
YCF1P39109 YIL089WYIL089W 618 nt-1.71□□□□□ -2.68
YCF1P39109 tP(UGG)QtP(UGG)Q 72 nt-1.72□□□□□ -2.69
YCF1P39109 RSM23YGL129C 1353 nt-1.73□□□□□ -2.69
YCF1P39109 YDR008CYDR008C 351 nt-1.73□□□□□ -2.69
YCF1P39109 YLR198CYLR198C 360 nt-1.73□□□□□ -2.69
YCF1P39109 YMR158C-AYMR158C-A 138 nt-1.73□□□□□ -2.69
YCF1P39109 YGL123C-AYGL123C-A 231 nt-1.74□□□□□ -2.69
YCF1P39109 YIL066W-AYIL066W-A 444 nt-1.74□□□□□ -2.69
YCF1P39109 YBR051WYBR051W 351 nt-1.74□□□□□ -2.69
YCF1P39109 TAR1YLR154W-C 375 nt-1.75□□□□□ -2.69
YCF1P39109 YAP6YDR259C 1152 nt-1.76□□□□□ -2.69
YCF1P39109 YGL258W-AYGL258W-A 234 nt-1.76□□□□□ -2.69
YCF1P39109 YHL046W-AYHL046W-A 327 nt-1.76□□□□□ -2.69
YCF1P39109 YLR271WYLR271W 825 nt-1.76□□□□□ -2.69
YCF1P39109 RUB1YDR139C 234 nt-1.76□□□□□ -2.69
YCF1P39109 GOS1YHL031C 672 nt-1.76□□□□□ -2.69
YCF1P39109 ZIP2YGL249W 2115 nt-1.77□□□□□ -2.69
YCF1P39109 QCR7YDR529C 384 nt-1.77□□□□□ -2.69
YCF1P39109 APQ13YJL075C 417 nt-1.78□□□□□ -2.69
YCF1P39109 YMR290W-AYMR290W-A 348 nt-1.78□□□□□ -2.69
YCF1P39109 YMR153C-AYMR153C-A 336 nt-1.8□□□□□ -2.7
YCF1P39109 YBR099CYBR099C 384 nt-1.8□□□□□ -2.7
YCF1P39109 RPF1YHR088W 888 nt-1.81□□□□□ -2.7
YCF1P39109 YER076W-AYER076W-A 348 nt-1.81□□□□□ -2.7
YCF1P39109 YIL032CYIL032C 357 nt-1.81□□□□□ -2.7
YCF1P39109 YKL115CYKL115C 393 nt-1.81□□□□□ -2.7
YCF1P39109 YLR041WYLR041W 321 nt-1.81□□□□□ -2.7
YCF1P39109 SMD2YLR275W 333 nt-1.81□□□□□ -2.7
YCF1P39109 YOR161W-AYOR161W-A 81 nt-1.81□□□□□ -2.7
YCF1P39109 RPL29YFR032C-A 180 nt-1.83□□□□□ -2.7
YCF1P39109 YLR146W-AYLR146W-A 189 nt-1.83□□□□□ -2.7
YCF1P39109 SKI7YOR076C 2244 nt-1.84□□□□□ -2.7
YCF1P39109 PSF2YJL072C 642 nt-1.85□□□□□ -2.71
YCF1P39109 PAU9YBL108C-A 129 nt-1.85□□□□□ -2.71
YCF1P39109 YCR024C-BYCR024C-B 267 nt-1.86□□□□□ -2.71
YCF1P39109 YJL135WYJL135W 318 nt-1.86□□□□□ -2.71
YCF1P39109 PAN3YKL025C 2040 nt-1.86□□□□□ -2.71
YCF1P39109 SNU13YEL026W 381 nt-1.86□□□□□ -2.71
YCF1P39109 YJL182CYJL182C 318 nt-1.86□□□□□ -2.71
YCF1P39109 SDS22YKL193C 1017 nt-1.86□□□□□ -2.71
YCF1P39109 YPR099CYPR099C 357 nt-1.86□□□□□ -2.71
YCF1P39109 PCF11YDR228C 1881 nt-1.86□□□□□ -2.71
YCF1P39109 YBL062WYBL062W 381 nt-1.87□□□□□ -2.71
YCF1P39109 YOL166W-AYOL166W-A 156 nt-1.88□□□□□ -2.71
YCF1P39109 15S_rRNA15S_rRNA 1649 nt-1.88□□□□□ -2.71
YCF1P39109 tY(GUA)QtY(GUA)Q 84 nt-1.89□□□□□ -2.71
YCF1P39109 YGL182CYGL182C 324 nt-1.9□□□□□ -2.71
YCF1P39109 YMR254CYMR254C 309 nt-1.9□□□□□ -2.71
YCF1P39109 ATP20YPR020W 348 nt-1.9□□□□□ -2.71
YCF1P39109 YER138W-AYER138W-A 105 nt-1.91□□□□□ -2.71
YCF1P39109 APQ12YIL040W 417 nt-1.91□□□□□ -2.71
YCF1P39109 PBI2YNL015W 228 nt-1.91□□□□□ -2.72
YCF1P39109 YOL029CYOL029C 606 nt-1.93□□□□□ -2.72
YCF1P39109 YKL068W-AYKL068W-A 237 nt-1.94□□□□□ -2.72
YCF1P39109 CMS1YLR003C 876 nt-1.96□□□□□ -2.72
YCF1P39109 YML100W-AYML100W-A 174 nt-1.96□□□□□ -2.72
YCF1P39109 YPR142CYPR142C 564 nt-1.96□□□□□ -2.72
YCF1P39109 BNS1YGR230W 414 nt-1.96□□□□□ -2.72
YCF1P39109 YBL008W-AYBL008W-A 240 nt-1.96□□□□□ -2.72
YCF1P39109 YOL160WYOL160W 342 nt-1.96□□□□□ -2.72
YCF1P39109 snR79snR79 84 nt-1.97□□□□□ -2.73
YCF1P39109 YHL041WYHL041W 450 nt-1.97□□□□□ -2.73
YCF1P39109 YLR154W-FYLR154W-F 141 nt-1.97□□□□□ -2.73
YCF1P39109 YLR171WYLR171W 390 nt-1.97□□□□□ -2.73
YCF1P39109 YMR307C-AYMR307C-A 195 nt-1.97□□□□□ -2.73
YCF1P39109 YER158W-AYER158W-A 216 nt-1.98□□□□□ -2.73
YCF1P39109 RPS10BYMR230W 318 nt-1.98□□□□□ -2.73
YCF1P39109 YJL077W-AYJL077W-A 87 nt-2□□□□□ -2.73
YCF1P39109 YGR204C-AYGR204C-A 114 nt-2.01□□□□□ -2.73
YCF1P39109 YGL042CYGL042C 306 nt-2.01□□□□□ -2.73
YCF1P39109 YML108WYML108W 318 nt-2.01□□□□□ -2.73
YCF1P39109 YER084W-AYER084W-A 513 nt-2.02□□□□□ -2.73
YCF1P39109 RRI2YOL117W 1938 nt-2.03□□□□□ -2.73
YCF1P39109 YIR044CYIR044C 186 nt-2.04□□□□□ -2.74
YCF1P39109 YJL020W-AYJL020W-A 258 nt-2.04□□□□□ -2.74
YCF1P39109 YNL067W-AYNL067W-A 147 nt-2.04□□□□□ -2.74
YCF1P39109 YPL182CYPL182C 384 nt-2.04□□□□□ -2.74
YCF1P39109 RSM18YER050C 417 nt-2.05□□□□□ -2.74
YCF1P39109 RPS20YHL015W 366 nt-2.05□□□□□ -2.74
YCF1P39109 LIN1YHR156C 1023 nt-2.06□□□□□ -2.74
YCF1P39109 YDL185C-AYDL185C-A 228 nt-2.07□□□□□ -2.74
YCF1P39109 SDH7YDR511W 402 nt-2.07□□□□□ -2.74
YCF1P39109 LRP1YHR081W 555 nt-2.07□□□□□ -2.74
YCF1P39109 YCR100CYCR100C 951 nt-2.07□□□□□ -2.74
YCF1P39109 YIL002W-AYIL002W-A 210 nt-2.07□□□□□ -2.74
YCF1P39109 BLI1YKL061W 342 nt-2.09□□□□□ -2.74
YCF1P39109 VAM3YOR106W 852 nt-2.09□□□□□ -2.74
YCF1P39109 YDR269CYDR269C 324 nt-2.1□□□□□ -2.75
YCF1P39109 YJL086CYJL086C 369 nt-2.1□□□□□ -2.75
YCF1P39109 DCP1YOL149W 696 nt-2.11□□□□□ -2.75
YCF1P39109 snR49snR49 165 nt-2.11□□□□□ -2.75
YCF1P39109 YNL162W-AYNL162W-A 219 nt-2.12□□□□□ -2.75
YCF1P39109 YPL261CYPL261C 309 nt-2.12□□□□□ -2.75
YCF1P39109 LOC1YFR001W 615 nt-2.13□□□□□ -2.75
YCF1P39109 YHR130CYHR130C 336 nt-2.14□□□□□ -2.75
Retrieved 100 of 7,029 protein–RNA pairs in 43.4 ms