Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YPR117WYPR117W 7470 nt0.78□□□□□ -2.28
TDA11P38854 RPS20YHL015W 366 nt0.78□□□□□ -2.28
TDA11P38854 YOL014WYOL014W 375 nt0.78□□□□□ -2.28
TDA11P38854 SEC1YDR164C 2175 nt0.78□□□□□ -2.28
TDA11P38854 WAR1YML076C 2835 nt0.78□□□□□ -2.29
TDA11P38854 INP2YMR163C 2118 nt0.77□□□□□ -2.29
TDA11P38854 GPG1YGL121C 381 nt0.77□□□□□ -2.29
TDA11P38854 YKL083WYKL083W 615 nt0.77□□□□□ -2.29
TDA11P38854 YBL008W-AYBL008W-A 240 nt0.77□□□□□ -2.29
TDA11P38854 RKR1YMR247C 4689 nt0.76□□□□□ -2.29
TDA11P38854 YDR521WYDR521W 336 nt0.75□□□□□ -2.29
TDA11P38854 ALG13YGL047W 609 nt0.75□□□□□ -2.29
TDA11P38854 YJL007CYJL007C 315 nt0.75□□□□□ -2.29
TDA11P38854 YAR047CYAR047C 321 nt0.75□□□□□ -2.29
TDA11P38854 YLR434CYLR434C 384 nt0.75□□□□□ -2.29
TDA11P38854 YIR044CYIR044C 186 nt0.74□□□□□ -2.29
TDA11P38854 YJR011CYJR011C 786 nt0.74□□□□□ -2.29
TDA11P38854 YLR456WYLR456W 615 nt0.74□□□□□ -2.29
TDA11P38854 YPL185WYPL185W 396 nt0.74□□□□□ -2.29
TDA11P38854 RIM20YOR275C 1986 nt0.74□□□□□ -2.29
TDA11P38854 PCF11YDR228C 1881 nt0.73□□□□□ -2.29
TDA11P38854 PKH2YOL100W 3246 nt0.73□□□□□ -2.29
TDA11P38854 ISD11YER048W-A 285 nt0.73□□□□□ -2.29
TDA11P38854 YKL145W-AYKL145W-A 93 nt0.73□□□□□ -2.29
TDA11P38854 RPL38YLR325C 237 nt0.73□□□□□ -2.29
TDA11P38854 YNL058CYNL058C 951 nt0.73□□□□□ -2.29
TDA11P38854 YIL142C-AYIL142C-A 333 nt0.72□□□□□ -2.29
TDA11P38854 YLR406C-AYLR406C-A 150 nt0.72□□□□□ -2.29
TDA11P38854 YBR064WYBR064W 429 nt0.72□□□□□ -2.29
TDA11P38854 YBR206WYBR206W 324 nt0.72□□□□□ -2.29
TDA11P38854 BFR2YDR299W 1605 nt0.71□□□□□ -2.3
TDA11P38854 NHP2YDL208W 471 nt0.71□□□□□ -2.3
TDA11P38854 MAM33YIL070C 801 nt0.71□□□□□ -2.3
TDA11P38854 ASE1YOR058C 2658 nt0.71□□□□□ -2.3
TDA11P38854 PMP1YCR024C-A 123 nt0.7□□□□□ -2.3
TDA11P38854 NOP9YJL010C 2001 nt0.7□□□□□ -2.3
TDA11P38854 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
TDA11P38854 YGR174W-AYGR174W-A 87 nt0.68□□□□□ -2.3
TDA11P38854 DBP6YNR038W 1890 nt0.68□□□□□ -2.3
TDA11P38854 YPR002C-AYPR002C-A 198 nt0.67□□□□□ -2.3
TDA11P38854 Q0017Q0017 162 nt0.67□□□□□ -2.3
TDA11P38854 LTE1YAL024C 4308 nt0.66□□□□□ -2.3
TDA11P38854 YSP1YHR155W 3687 nt0.66□□□□□ -2.3
TDA11P38854 YDR426CYDR426C 378 nt0.66□□□□□ -2.3
TDA11P38854 YML007C-AYML007C-A 111 nt0.66□□□□□ -2.3
TDA11P38854 PRM3YPL192C 402 nt0.66□□□□□ -2.3
TDA11P38854 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
TDA11P38854 CUL3YGR003W 2235 nt0.66□□□□□ -2.3
TDA11P38854 YLL007CYLL007C 1998 nt0.66□□□□□ -2.3
TDA11P38854 YKL063CYKL063C 504 nt0.65□□□□□ -2.31
TDA11P38854 YPL205CYPL205C 345 nt0.65□□□□□ -2.31
TDA11P38854 YER079WYER079W 633 nt0.64□□□□□ -2.31
TDA11P38854 YMR031W-AYMR031W-A 327 nt0.64□□□□□ -2.31
TDA11P38854 CMC4YMR194C-B 222 nt0.64□□□□□ -2.31
TDA11P38854 YOR282WYOR282W 321 nt0.64□□□□□ -2.31
TDA11P38854 MCM10YIL150C 1716 nt0.64□□□□□ -2.31
TDA11P38854 YMR160WYMR160W 2451 nt0.63□□□□□ -2.31
TDA11P38854 YLR202CYLR202C 327 nt0.63□□□□□ -2.31
TDA11P38854 YMR321CYMR321C 318 nt0.63□□□□□ -2.31
TDA11P38854 CHS6YJL099W 2241 nt0.62□□□□□ -2.31
TDA11P38854 GEA2YEL022W 4380 nt0.62□□□□□ -2.31
TDA11P38854 tT(AGU)BtT(AGU)B 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)CtT(AGU)C 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)DtT(AGU)D 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)HtT(AGU)H 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)I1tT(AGU)I1 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)I2tT(AGU)I2 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)JtT(AGU)J 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)N1tT(AGU)N1 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)N2tT(AGU)N2 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)O1tT(AGU)O1 73 nt0.61□□□□□ -2.31
TDA11P38854 tT(AGU)O2tT(AGU)O2 73 nt0.61□□□□□ -2.31
TDA11P38854 IES4YOR189W 351 nt0.61□□□□□ -2.31
TDA11P38854 UTP20YBL004W 7482 nt0.6□□□□□ -2.31
TDA11P38854 OLI1Q0130 231 nt0.6□□□□□ -2.31
TDA11P38854 PTP2YOR208W 2253 nt0.6□□□□□ -2.31
TDA11P38854 YDR344CYDR344C 444 nt0.59□□□□□ -2.31
TDA11P38854 YHR138CYHR138C 345 nt0.58□□□□□ -2.32
TDA11P38854 YPL044CYPL044C 549 nt0.58□□□□□ -2.32
TDA11P38854 CSN9YDR179C 489 nt0.57□□□□□ -2.32
TDA11P38854 YFR012W-AYFR012W-A 87 nt0.57□□□□□ -2.32
TDA11P38854 AGA2YGL032C 264 nt0.57□□□□□ -2.32
TDA11P38854 YHR063W-AYHR063W-A 336 nt0.57□□□□□ -2.32
TDA11P38854 YLR334CYLR334C 381 nt0.57□□□□□ -2.32
TDA11P38854 BSC3YLR465C 309 nt0.57□□□□□ -2.32
TDA11P38854 VPS20YMR077C 666 nt0.57□□□□□ -2.32
TDA11P38854 YML002WYML002W 2214 nt0.57□□□□□ -2.32
TDA11P38854 TRS65YGR166W 1683 nt0.56□□□□□ -2.32
TDA11P38854 ECM12YHR021W-A 456 nt0.56□□□□□ -2.32
TDA11P38854 YJL120WYJL120W 324 nt0.56□□□□□ -2.32
TDA11P38854 YNL324WYNL324W 396 nt0.56□□□□□ -2.32
TDA11P38854 YJR157WYJR157W 363 nt0.55□□□□□ -2.32
TDA11P38854 PCC1YKR095W-A 267 nt0.55□□□□□ -2.32
TDA11P38854 YOR053WYOR053W 342 nt0.55□□□□□ -2.32
TDA11P38854 YOR218CYOR218C 420 nt0.55□□□□□ -2.32
TDA11P38854 NPR2YEL062W 1848 nt0.54□□□□□ -2.32
TDA11P38854 HAL9YOL089C 3093 nt0.54□□□□□ -2.32
TDA11P38854 FYV10YIL097W 1551 nt0.53□□□□□ -2.32
TDA11P38854 YPL068CYPL068C 882 nt0.53□□□□□ -2.32
TDA11P38854 YBR285WYBR285W 435 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms