Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 YBL071CYBL071C 309 nt0.51□□□□□ -2.33
CUE1P38428 YML002WYML002W 2214 nt0.5□□□□□ -2.33
CUE1P38428 YNR025CYNR025C 360 nt0.5□□□□□ -2.33
CUE1P38428 CDC33YOL139C 642 nt0.5□□□□□ -2.33
CUE1P38428 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
CUE1P38428 CHS6YJL099W 2241 nt0.49□□□□□ -2.33
CUE1P38428 YJL020W-AYJL020W-A 258 nt0.49□□□□□ -2.33
CUE1P38428 AIM29YKR074W 468 nt0.48□□□□□ -2.33
CUE1P38428 ISF1YMR081C 1017 nt0.48□□□□□ -2.33
CUE1P38428 ZEO1YOL109W 342 nt0.48□□□□□ -2.33
CUE1P38428 snR51snR51 107 nt0.48□□□□□ -2.33
CUE1P38428 YBL008W-AYBL008W-A 240 nt0.47□□□□□ -2.33
CUE1P38428 YSP1YHR155W 3687 nt0.47□□□□□ -2.33
CUE1P38428 SDH7YDR511W 402 nt0.46□□□□□ -2.34
CUE1P38428 YIR044CYIR044C 186 nt0.46□□□□□ -2.34
CUE1P38428 UBC7YMR022W 498 nt0.46□□□□□ -2.34
CUE1P38428 YOL014WYOL014W 375 nt0.46□□□□□ -2.34
CUE1P38428 YOR192C-CYOR192C-C 237 nt0.46□□□□□ -2.34
CUE1P38428 IQG1YPL242C 4488 nt0.45□□□□□ -2.34
CUE1P38428 YOR218CYOR218C 420 nt0.45□□□□□ -2.34
CUE1P38428 YBR064WYBR064W 429 nt0.45□□□□□ -2.34
CUE1P38428 BIR1YJR089W 2865 nt0.45□□□□□ -2.34
CUE1P38428 NPR2YEL062W 1848 nt0.44□□□□□ -2.34
CUE1P38428 YDR344CYDR344C 444 nt0.44□□□□□ -2.34
CUE1P38428 YHR130CYHR130C 336 nt0.44□□□□□ -2.34
CUE1P38428 YKL145W-AYKL145W-A 93 nt0.44□□□□□ -2.34
CUE1P38428 YLR287CYLR287C 1068 nt0.43□□□□□ -2.34
CUE1P38428 YPL229WYPL229W 621 nt0.43□□□□□ -2.34
CUE1P38428 DIE2YGR227W 1578 nt0.43□□□□□ -2.34
CUE1P38428 INP2YMR163C 2118 nt0.43□□□□□ -2.34
CUE1P38428 CUL3YGR003W 2235 nt0.42□□□□□ -2.34
CUE1P38428 BI2Q0110 1272 nt0.42□□□□□ -2.34
CUE1P38428 YPL044CYPL044C 549 nt0.42□□□□□ -2.34
CUE1P38428 YLL007CYLL007C 1998 nt0.42□□□□□ -2.34
CUE1P38428 AI1Q0050 2505 nt0.42□□□□□ -2.34
CUE1P38428 NIP100YPL174C 2607 nt0.42□□□□□ -2.34
CUE1P38428 RPS20YHL015W 366 nt0.41□□□□□ -2.34
CUE1P38428 BSC3YLR465C 309 nt0.4□□□□□ -2.35
CUE1P38428 YPL185WYPL185W 396 nt0.4□□□□□ -2.35
CUE1P38428 YBR206WYBR206W 324 nt0.4□□□□□ -2.35
CUE1P38428 snR54snR54 86 nt0.4□□□□□ -2.35
CUE1P38428 MCM10YIL150C 1716 nt0.4□□□□□ -2.35
CUE1P38428 ASE1YOR058C 2658 nt0.39□□□□□ -2.35
CUE1P38428 YHL041WYHL041W 450 nt0.39□□□□□ -2.35
CUE1P38428 YJR011CYJR011C 786 nt0.39□□□□□ -2.35
CUE1P38428 YNL122CYNL122C 348 nt0.39□□□□□ -2.35
CUE1P38428 YOR192C-BYOR192C-B 5313 nt0.39□□□□□ -2.35
CUE1P38428 STE5YDR103W 2754 nt0.38□□□□□ -2.35
CUE1P38428 TRS65YGR166W 1683 nt0.38□□□□□ -2.35
CUE1P38428 ATG31YDR022C 591 nt0.38□□□□□ -2.35
CUE1P38428 OLI1Q0130 231 nt0.38□□□□□ -2.35
CUE1P38428 MAM33YIL070C 801 nt0.38□□□□□ -2.35
CUE1P38428 YIL134C-AYIL134C-A 204 nt0.38□□□□□ -2.35
CUE1P38428 RPL26AYLR344W 384 nt0.38□□□□□ -2.35
CUE1P38428 YNL058CYNL058C 951 nt0.38□□□□□ -2.35
CUE1P38428 CBS1YDL069C 690 nt0.37□□□□□ -2.35
CUE1P38428 YAP6YDR259C 1152 nt0.37□□□□□ -2.35
CUE1P38428 YLR171WYLR171W 390 nt0.36□□□□□ -2.35
CUE1P38428 ABF2YMR072W 552 nt0.36□□□□□ -2.35
CUE1P38428 THO2YNL139C 4794 nt0.36□□□□□ -2.35
CUE1P38428 FYV10YIL097W 1551 nt0.36□□□□□ -2.35
CUE1P38428 RPL26BYGR034W 384 nt0.35□□□□□ -2.35
CUE1P38428 YKL083WYKL083W 615 nt0.35□□□□□ -2.35
CUE1P38428 PTP2YOR208W 2253 nt0.34□□□□□ -2.35
CUE1P38428 YEL030C-AYEL030C-A 315 nt0.34□□□□□ -2.36
CUE1P38428 ECL1YGR146C 636 nt0.34□□□□□ -2.36
CUE1P38428 RPS24BYIL069C 408 nt0.34□□□□□ -2.36
CUE1P38428 YGR290WYGR290W 444 nt0.33□□□□□ -2.36
CUE1P38428 FYV7YLR068W 456 nt0.33□□□□□ -2.36
CUE1P38428 YMR321CYMR321C 318 nt0.32□□□□□ -2.36
CUE1P38428 SBH1YER087C-B 249 nt0.31□□□□□ -2.36
CUE1P38428 YFR012W-AYFR012W-A 87 nt0.31□□□□□ -2.36
CUE1P38428 YJL127W-AYJL127W-A 117 nt0.31□□□□□ -2.36
CUE1P38428 YLR101CYLR101C 396 nt0.31□□□□□ -2.36
CUE1P38428 MRPL50YNR022C 420 nt0.31□□□□□ -2.36
CUE1P38428 BEM3YPL115C 3387 nt0.31□□□□□ -2.36
CUE1P38428 YAR047CYAR047C 321 nt0.3□□□□□ -2.36
CUE1P38428 YDL158CYDL158C 309 nt0.29□□□□□ -2.36
CUE1P38428 YPR002C-AYPR002C-A 198 nt0.29□□□□□ -2.36
CUE1P38428 PAA1YDR071C 576 nt0.28□□□□□ -2.36
CUE1P38428 PCF11YDR228C 1881 nt0.28□□□□□ -2.36
CUE1P38428 MLP2YIL149C 5040 nt0.28□□□□□ -2.37
CUE1P38428 YER006C-AYER006C-A 318 nt0.27□□□□□ -2.37
CUE1P38428 YGR174W-AYGR174W-A 87 nt0.27□□□□□ -2.37
CUE1P38428 YML007C-AYML007C-A 111 nt0.27□□□□□ -2.37
CUE1P38428 YOL013W-BYOL013W-B 291 nt0.27□□□□□ -2.37
CUE1P38428 YPR160W-AYPR160W-A 81 nt0.27□□□□□ -2.37
CUE1P38428 SPO21YOL091W 1830 nt0.27□□□□□ -2.37
CUE1P38428 HAL9YOL089C 3093 nt0.27□□□□□ -2.37
CUE1P38428 PET111YMR257C 2403 nt0.26□□□□□ -2.37
CUE1P38428 PRP5YBR237W 2550 nt0.26□□□□□ -2.37
CUE1P38428 TOM22YNL131W 459 nt0.26□□□□□ -2.37
CUE1P38428 YNL054W-BYNL054W-B 5250 nt0.25□□□□□ -2.37
CUE1P38428 YEL050W-AYEL050W-A 192 nt0.25□□□□□ -2.37
CUE1P38428 snR41snR41 95 nt0.25□□□□□ -2.37
CUE1P38428 BUL2YML111W 2763 nt0.24□□□□□ -2.37
CUE1P38428 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
CUE1P38428 YLR456WYLR456W 615 nt0.24□□□□□ -2.37
CUE1P38428 YNL211CYNL211C 261 nt0.24□□□□□ -2.37
CUE1P38428 VIK1YPL253C 1944 nt0.23□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 6.7 ms