Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 YKL145W-AYKL145W-A 93 nt0.47□□□□□ -2.33
LDB7P38210 YBL071CYBL071C 309 nt0.47□□□□□ -2.33
LDB7P38210 NPR2YEL062W 1848 nt0.46□□□□□ -2.34
LDB7P38210 EMC4YGL231C 573 nt0.46□□□□□ -2.34
LDB7P38210 QCR9YGR183C 201 nt0.46□□□□□ -2.34
LDB7P38210 YJL020W-AYJL020W-A 258 nt0.46□□□□□ -2.34
LDB7P38210 snR51snR51 107 nt0.46□□□□□ -2.34
LDB7P38210 CHS6YJL099W 2241 nt0.46□□□□□ -2.34
LDB7P38210 YHR130CYHR130C 336 nt0.45□□□□□ -2.34
LDB7P38210 YPL044CYPL044C 549 nt0.45□□□□□ -2.34
LDB7P38210 YPL185WYPL185W 396 nt0.45□□□□□ -2.34
LDB7P38210 snR72snR72 98 nt0.44□□□□□ -2.34
LDB7P38210 STE18YJR086W 333 nt0.44□□□□□ -2.34
LDB7P38210 YLR287CYLR287C 1068 nt0.44□□□□□ -2.34
LDB7P38210 CDC33YOL139C 642 nt0.44□□□□□ -2.34
LDB7P38210 YPL229WYPL229W 621 nt0.44□□□□□ -2.34
LDB7P38210 WIP1YDR374W-A 270 nt0.43□□□□□ -2.34
LDB7P38210 UBC7YMR022W 498 nt0.43□□□□□ -2.34
LDB7P38210 ZEO1YOL109W 342 nt0.43□□□□□ -2.34
LDB7P38210 YER084W-AYER084W-A 513 nt0.42□□□□□ -2.34
LDB7P38210 PAU12YGR294W 363 nt0.42□□□□□ -2.34
LDB7P38210 INP2YMR163C 2118 nt0.42□□□□□ -2.34
LDB7P38210 YDR344CYDR344C 444 nt0.41□□□□□ -2.34
LDB7P38210 SDH7YDR511W 402 nt0.41□□□□□ -2.34
LDB7P38210 YNL058CYNL058C 951 nt0.41□□□□□ -2.34
LDB7P38210 DIE2YGR227W 1578 nt0.4□□□□□ -2.34
LDB7P38210 YOL014WYOL014W 375 nt0.4□□□□□ -2.35
LDB7P38210 YSP1YHR155W 3687 nt0.4□□□□□ -2.35
LDB7P38210 PTP2YOR208W 2253 nt0.4□□□□□ -2.35
LDB7P38210 BEM3YPL115C 3387 nt0.39□□□□□ -2.35
LDB7P38210 YEL030C-AYEL030C-A 315 nt0.39□□□□□ -2.35
LDB7P38210 YNR025CYNR025C 360 nt0.39□□□□□ -2.35
LDB7P38210 MLP1YKR095W 5628 nt0.39□□□□□ -2.35
LDB7P38210 RPS20YHL015W 366 nt0.38□□□□□ -2.35
LDB7P38210 YIL134C-AYIL134C-A 204 nt0.38□□□□□ -2.35
LDB7P38210 AIM29YKR074W 468 nt0.38□□□□□ -2.35
LDB7P38210 snR54snR54 86 nt0.38□□□□□ -2.35
LDB7P38210 IQG1YPL242C 4488 nt0.37□□□□□ -2.35
LDB7P38210 TRS65YGR166W 1683 nt0.37□□□□□ -2.35
LDB7P38210 YAP6YDR259C 1152 nt0.37□□□□□ -2.35
LDB7P38210 BSC3YLR465C 309 nt0.37□□□□□ -2.35
LDB7P38210 MLP2YIL149C 5040 nt0.36□□□□□ -2.35
LDB7P38210 OLI1Q0130 231 nt0.36□□□□□ -2.35
LDB7P38210 YBL008W-AYBL008W-A 240 nt0.36□□□□□ -2.35
LDB7P38210 YBR064WYBR064W 429 nt0.36□□□□□ -2.35
LDB7P38210 PAA1YDR071C 576 nt0.35□□□□□ -2.35
LDB7P38210 RPS24BYIL069C 408 nt0.35□□□□□ -2.35
LDB7P38210 MAM33YIL070C 801 nt0.35□□□□□ -2.35
LDB7P38210 AI1Q0050 2505 nt0.35□□□□□ -2.35
LDB7P38210 NIP100YPL174C 2607 nt0.34□□□□□ -2.35
LDB7P38210 BI2Q0110 1272 nt0.34□□□□□ -2.36
LDB7P38210 RPL26BYGR034W 384 nt0.34□□□□□ -2.36
LDB7P38210 ATG31YDR022C 591 nt0.33□□□□□ -2.36
LDB7P38210 ECL1YGR146C 636 nt0.33□□□□□ -2.36
LDB7P38210 YKL083WYKL083W 615 nt0.33□□□□□ -2.36
LDB7P38210 SPO21YOL091W 1830 nt0.33□□□□□ -2.36
LDB7P38210 FYV10YIL097W 1551 nt0.32□□□□□ -2.36
LDB7P38210 YHL041WYHL041W 450 nt0.32□□□□□ -2.36
LDB7P38210 YJL127W-AYJL127W-A 117 nt0.32□□□□□ -2.36
LDB7P38210 MCM10YIL150C 1716 nt0.31□□□□□ -2.36
LDB7P38210 YJR011CYJR011C 786 nt0.31□□□□□ -2.36
LDB7P38210 ABF2YMR072W 552 nt0.31□□□□□ -2.36
LDB7P38210 YNL122CYNL122C 348 nt0.31□□□□□ -2.36
LDB7P38210 YGR174W-AYGR174W-A 87 nt0.3□□□□□ -2.36
LDB7P38210 YOR192C-CYOR192C-C 237 nt0.3□□□□□ -2.36
LDB7P38210 YBR206WYBR206W 324 nt0.3□□□□□ -2.36
LDB7P38210 PET111YMR257C 2403 nt0.3□□□□□ -2.36
LDB7P38210 SBH1YER087C-B 249 nt0.29□□□□□ -2.36
LDB7P38210 YLR171WYLR171W 390 nt0.29□□□□□ -2.36
LDB7P38210 YAR047CYAR047C 321 nt0.29□□□□□ -2.36
LDB7P38210 VIK1YPL253C 1944 nt0.27□□□□□ -2.37
LDB7P38210 CBS1YDL069C 690 nt0.27□□□□□ -2.37
LDB7P38210 YGR290WYGR290W 444 nt0.27□□□□□ -2.37
LDB7P38210 SEC8YPR055W 3198 nt0.27□□□□□ -2.37
LDB7P38210 YER006C-AYER006C-A 318 nt0.26□□□□□ -2.37
LDB7P38210 YML007C-AYML007C-A 111 nt0.26□□□□□ -2.37
LDB7P38210 YPR002C-AYPR002C-A 198 nt0.26□□□□□ -2.37
LDB7P38210 YOR192C-BYOR192C-B 5313 nt0.26□□□□□ -2.37
LDB7P38210 HAL9YOL089C 3093 nt0.25□□□□□ -2.37
LDB7P38210 YEL050W-AYEL050W-A 192 nt0.25□□□□□ -2.37
LDB7P38210 FYV7YLR068W 456 nt0.25□□□□□ -2.37
LDB7P38210 ASE1YOR058C 2658 nt0.25□□□□□ -2.37
LDB7P38210 PCF11YDR228C 1881 nt0.24□□□□□ -2.37
LDB7P38210 YPR160W-AYPR160W-A 81 nt0.24□□□□□ -2.37
LDB7P38210 YLR101CYLR101C 396 nt0.23□□□□□ -2.37
LDB7P38210 YLR399W-AYLR399W-A 105 nt0.23□□□□□ -2.37
LDB7P38210 YOL013W-BYOL013W-B 291 nt0.23□□□□□ -2.37
LDB7P38210 YNL054W-BYNL054W-B 5250 nt0.22□□□□□ -2.37
LDB7P38210 COX5BYIL111W 456 nt0.22□□□□□ -2.37
LDB7P38210 ISF1YMR081C 1017 nt0.22□□□□□ -2.37
LDB7P38210 MRPL50YNR022C 420 nt0.22□□□□□ -2.37
LDB7P38210 HMRA2YCR096C 360 nt0.2□□□□□ -2.38
LDB7P38210 YAL067W-AYAL067W-A 228 nt0.2□□□□□ -2.38
LDB7P38210 PRP5YBR237W 2550 nt0.19□□□□□ -2.38
LDB7P38210 OST4YDL232W 111 nt0.19□□□□□ -2.38
LDB7P38210 YHL046W-AYHL046W-A 327 nt0.19□□□□□ -2.38
LDB7P38210 YLR456WYLR456W 615 nt0.19□□□□□ -2.38
LDB7P38210 YMR321CYMR321C 318 nt0.19□□□□□ -2.38
LDB7P38210 YOR053WYOR053W 342 nt0.19□□□□□ -2.38
LDB7P38210 BIR1YJR089W 2865 nt0.18□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 107 ms