Protein–RNA interactions for Protein: P16370

RPB3, DNA-directed RNA polymerase II subunit RPB3, yeastyeast

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB3P16370 YIL134C-AYIL134C-A 204 nt0.35□□□□□ -2.35
RPB3P16370 YIR044CYIR044C 186 nt0.35□□□□□ -2.35
RPB3P16370 AIM29YKR074W 468 nt0.35□□□□□ -2.35
RPB3P16370 YLR287CYLR287C 1068 nt0.35□□□□□ -2.35
RPB3P16370 UBC7YMR022W 498 nt0.35□□□□□ -2.35
RPB3P16370 ZEO1YOL109W 342 nt0.35□□□□□ -2.35
RPB3P16370 YBR064WYBR064W 429 nt0.35□□□□□ -2.35
RPB3P16370 YCK3YER123W 1575 nt0.35□□□□□ -2.35
RPB3P16370 RPS24BYIL069C 408 nt0.34□□□□□ -2.36
RPB3P16370 MYO1YHR023W 5787 nt0.33□□□□□ -2.36
RPB3P16370 RPL26BYGR034W 384 nt0.33□□□□□ -2.36
RPB3P16370 YHL041WYHL041W 450 nt0.33□□□□□ -2.36
RPB3P16370 BSC3YLR465C 309 nt0.33□□□□□ -2.36
RPB3P16370 YOR192C-CYOR192C-C 237 nt0.33□□□□□ -2.36
RPB3P16370 YOR218CYOR218C 420 nt0.33□□□□□ -2.36
RPB3P16370 INP2YMR163C 2118 nt0.32□□□□□ -2.36
RPB3P16370 OLI1Q0130 231 nt0.32□□□□□ -2.36
RPB3P16370 RPL26AYLR344W 384 nt0.32□□□□□ -2.36
RPB3P16370 YNR025CYNR025C 360 nt0.32□□□□□ -2.36
RPB3P16370 YPL229WYPL229W 621 nt0.32□□□□□ -2.36
RPB3P16370 MCM10YIL150C 1716 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)BtF(GAA)B 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)FtF(GAA)F 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)GtF(GAA)G 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)H1tF(GAA)H1 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)H2tF(GAA)H2 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)MtF(GAA)M 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)P1tF(GAA)P1 73 nt0.31□□□□□ -2.36
RPB3P16370 tF(GAA)P2tF(GAA)P2 73 nt0.31□□□□□ -2.36
RPB3P16370 YHR130CYHR130C 336 nt0.3□□□□□ -2.36
RPB3P16370 MAM33YIL070C 801 nt0.3□□□□□ -2.36
RPB3P16370 YNL058CYNL058C 951 nt0.3□□□□□ -2.36
RPB3P16370 DIE2YGR227W 1578 nt0.3□□□□□ -2.36
RPB3P16370 YAP6YDR259C 1152 nt0.29□□□□□ -2.36
RPB3P16370 YEL030C-AYEL030C-A 315 nt0.29□□□□□ -2.36
RPB3P16370 YKL083WYKL083W 615 nt0.29□□□□□ -2.36
RPB3P16370 YKL145W-AYKL145W-A 93 nt0.29□□□□□ -2.36
RPB3P16370 YBR206WYBR206W 324 nt0.29□□□□□ -2.36
RPB3P16370 FMP27YLR454W 7887 nt0.29□□□□□ -2.36
RPB3P16370 YSP1YHR155W 3687 nt0.28□□□□□ -2.36
RPB3P16370 SBH1YER087C-B 249 nt0.28□□□□□ -2.36
RPB3P16370 YJR011CYJR011C 786 nt0.28□□□□□ -2.36
RPB3P16370 PTP2YOR208W 2253 nt0.27□□□□□ -2.37
RPB3P16370 ULP2YIL031W 3105 nt0.27□□□□□ -2.37
RPB3P16370 YJL127W-AYJL127W-A 117 nt0.27□□□□□ -2.37
RPB3P16370 ABF2YMR072W 552 nt0.27□□□□□ -2.37
RPB3P16370 YPL185WYPL185W 396 nt0.27□□□□□ -2.37
RPB3P16370 snR54snR54 86 nt0.27□□□□□ -2.37
RPB3P16370 BI2Q0110 1272 nt0.26□□□□□ -2.37
RPB3P16370 RPS20YHL015W 366 nt0.26□□□□□ -2.37
RPB3P16370 FYV10YIL097W 1551 nt0.26□□□□□ -2.37
RPB3P16370 CBS1YDL069C 690 nt0.25□□□□□ -2.37
RPB3P16370 PET111YMR257C 2403 nt0.25□□□□□ -2.37
RPB3P16370 ATG31YDR022C 591 nt0.24□□□□□ -2.37
RPB3P16370 YAR047CYAR047C 321 nt0.24□□□□□ -2.37
RPB3P16370 YNL122CYNL122C 348 nt0.24□□□□□ -2.37
RPB3P16370 AI1Q0050 2505 nt0.24□□□□□ -2.37
RPB3P16370 PCF11YDR228C 1881 nt0.23□□□□□ -2.37
RPB3P16370 SPO21YOL091W 1830 nt0.23□□□□□ -2.37
RPB3P16370 PAA1YDR071C 576 nt0.23□□□□□ -2.37
RPB3P16370 YFR012W-AYFR012W-A 87 nt0.23□□□□□ -2.37
RPB3P16370 ECL1YGR146C 636 nt0.23□□□□□ -2.37
RPB3P16370 PAU12YGR294W 363 nt0.23□□□□□ -2.37
RPB3P16370 NIP100YPL174C 2607 nt0.23□□□□□ -2.37
RPB3P16370 YGR174W-AYGR174W-A 87 nt0.22□□□□□ -2.37
RPB3P16370 YGR290WYGR290W 444 nt0.22□□□□□ -2.37
RPB3P16370 YLR171WYLR171W 390 nt0.22□□□□□ -2.37
RPB3P16370 FYV7YLR068W 456 nt0.21□□□□□ -2.38
RPB3P16370 ASE1YOR058C 2658 nt0.21□□□□□ -2.38
RPB3P16370 VIK1YPL253C 1944 nt0.21□□□□□ -2.38
RPB3P16370 ISF1YMR081C 1017 nt0.2□□□□□ -2.38
RPB3P16370 YPR002C-AYPR002C-A 198 nt0.2□□□□□ -2.38
RPB3P16370 TRS65YGR166W 1683 nt0.2□□□□□ -2.38
RPB3P16370 YML007C-AYML007C-A 111 nt0.19□□□□□ -2.38
RPB3P16370 YOR192C-BYOR192C-B 5313 nt0.18□□□□□ -2.38
RPB3P16370 BEM3YPL115C 3387 nt0.18□□□□□ -2.38
RPB3P16370 YER006C-AYER006C-A 318 nt0.18□□□□□ -2.38
RPB3P16370 YLR101CYLR101C 396 nt0.18□□□□□ -2.38
RPB3P16370 YNL211CYNL211C 261 nt0.18□□□□□ -2.38
RPB3P16370 YOL014WYOL014W 375 nt0.18□□□□□ -2.38
RPB3P16370 YPR160W-AYPR160W-A 81 nt0.18□□□□□ -2.38
RPB3P16370 COX5BYIL111W 456 nt0.17□□□□□ -2.38
RPB3P16370 snR41snR41 95 nt0.17□□□□□ -2.38
RPB3P16370 MLP1YKR095W 5628 nt0.17□□□□□ -2.38
RPB3P16370 SEC8YPR055W 3198 nt0.16□□□□□ -2.38
RPB3P16370 TOM22YNL131W 459 nt0.16□□□□□ -2.38
RPB3P16370 PRP5YBR237W 2550 nt0.15□□□□□ -2.38
RPB3P16370 OST4YDL232W 111 nt0.15□□□□□ -2.39
RPB3P16370 YDR426CYDR426C 378 nt0.15□□□□□ -2.39
RPB3P16370 YMR321CYMR321C 318 nt0.15□□□□□ -2.39
RPB3P16370 MRPL50YNR022C 420 nt0.15□□□□□ -2.39
RPB3P16370 YEL050W-AYEL050W-A 192 nt0.14□□□□□ -2.39
RPB3P16370 YOR011W-AYOR011W-A 207 nt0.14□□□□□ -2.39
RPB3P16370 ESP1YGR098C 4893 nt0.14□□□□□ -2.39
RPB3P16370 PRP42YDR235W 1635 nt0.13□□□□□ -2.39
RPB3P16370 YHL046W-AYHL046W-A 327 nt0.13□□□□□ -2.39
RPB3P16370 YLR399W-AYLR399W-A 105 nt0.13□□□□□ -2.39
RPB3P16370 YLR456WYLR456W 615 nt0.13□□□□□ -2.39
RPB3P16370 YOL013W-AYOL013W-A 192 nt0.13□□□□□ -2.39
RPB3P16370 YOR053WYOR053W 342 nt0.13□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 42.9 ms