Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrif1Q8CDD9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.22■□□□□ 0.35
Lrif1Q8CDD9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrif1Q8CDD9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Lrif1Q8CDD9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Lrif1Q8CDD9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lrif1Q8CDD9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lrif1Q8CDD9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lrif1Q8CDD9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrif1Q8CDD9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrif1Q8CDD9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms