Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 YDR341CYDR341C 1824 nt2.42□□□□□ -2.02
TY1A-PR3Q6Q5H1 PET309YLR067C 2898 nt2.41□□□□□ -2.02
TY1A-PR3Q6Q5H1 UBR1YGR184C 5853 nt2.41□□□□□ -2.02
TY1A-PR3Q6Q5H1 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
TY1A-PR3Q6Q5H1 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
TY1A-PR3Q6Q5H1 MSH5YDL154W 2706 nt2.4□□□□□ -2.02
TY1A-PR3Q6Q5H1 TRL1YJL087C 2484 nt2.4□□□□□ -2.03
TY1A-PR3Q6Q5H1 YER053C-AYER053C-A 114 nt2.4□□□□□ -2.03
TY1A-PR3Q6Q5H1 YIL174WYIL174W 228 nt2.4□□□□□ -2.03
TY1A-PR3Q6Q5H1 YJL222W-AYJL222W-A 228 nt2.4□□□□□ -2.03
TY1A-PR3Q6Q5H1 CTR9YOL145C 3234 nt2.4□□□□□ -2.03
TY1A-PR3Q6Q5H1 SGM1YJR134C 2124 nt2.39□□□□□ -2.03
TY1A-PR3Q6Q5H1 YIL071W-AYIL071W-A 477 nt2.39□□□□□ -2.03
TY1A-PR3Q6Q5H1 RPS17AYML024W 411 nt2.39□□□□□ -2.03
TY1A-PR3Q6Q5H1 ALK1YGL021W 2283 nt2.39□□□□□ -2.03
TY1A-PR3Q6Q5H1 AGC1YPR021C 2709 nt2.39□□□□□ -2.03
TY1A-PR3Q6Q5H1 SKP2YNL311C 2292 nt2.38□□□□□ -2.03
TY1A-PR3Q6Q5H1 IRE1YHR079C 3348 nt2.38□□□□□ -2.03
TY1A-PR3Q6Q5H1 AXL1YPR122W 3627 nt2.38□□□□□ -2.03
TY1A-PR3Q6Q5H1 RSE1YML049C 4086 nt2.37□□□□□ -2.03
TY1A-PR3Q6Q5H1 IFH1YLR223C 3258 nt2.37□□□□□ -2.03
TY1A-PR3Q6Q5H1 RPS30BYOR182C 192 nt2.37□□□□□ -2.03
TY1A-PR3Q6Q5H1 YIL082W-AYIL082W-A 4497 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 PKH2YOL100W 3246 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YCR038W-AYCR038W-A 126 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YDR521WYDR521W 336 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YIL134C-AYIL134C-A 204 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YBR099CYBR099C 384 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YDR098C-BYDR098C-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YDR210C-DYDR210C-D 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YDR316W-BYDR316W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YDR365W-BYDR365W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YER138CYER138C 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YER160CYER160C 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YGR038C-BYGR038C-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YGR161C-DYGR161C-D 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YJR027WYJR027W 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YLR157C-BYLR157C-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YML039WYML039W 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YML045WYML045W 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YMR050CYMR050C 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YOL103W-BYOL103W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YBR012W-BYBR012W-B 5271 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YOR142W-BYOR142W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YPL257W-BYPL257W-B 5268 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 YPR158W-BYPR158W-B 5271 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 SYH1YPL105C 2550 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 MSB2YGR014W 3921 nt2.36□□□□□ -2.03
TY1A-PR3Q6Q5H1 RPA190YOR341W 4995 nt2.35□□□□□ -2.03
TY1A-PR3Q6Q5H1 YDR354C-AYDR354C-A 144 nt2.35□□□□□ -2.03
TY1A-PR3Q6Q5H1 PMP2YEL017C-A 132 nt2.35□□□□□ -2.03
TY1A-PR3Q6Q5H1 COX12YLR038C 252 nt2.34□□□□□ -2.03
TY1A-PR3Q6Q5H1 FRK1YPL141C 2598 nt2.34□□□□□ -2.04
TY1A-PR3Q6Q5H1 MLH1YMR167W 2310 nt2.34□□□□□ -2.04
TY1A-PR3Q6Q5H1 KRE33YNL132W 3171 nt2.33□□□□□ -2.04
TY1A-PR3Q6Q5H1 YKR075W-AYKR075W-A 270 nt2.33□□□□□ -2.04
TY1A-PR3Q6Q5H1 GIP3YPL137C 3831 nt2.33□□□□□ -2.04
TY1A-PR3Q6Q5H1 ESL2YKR096W 3588 nt2.32□□□□□ -2.04
TY1A-PR3Q6Q5H1 RPL37BYDR500C 267 nt2.32□□□□□ -2.04
TY1A-PR3Q6Q5H1 YHR217CYHR217C 462 nt2.32□□□□□ -2.04
TY1A-PR3Q6Q5H1 PRP5YBR237W 2550 nt2.32□□□□□ -2.04
TY1A-PR3Q6Q5H1 STE6YKL209C 3873 nt2.32□□□□□ -2.04
TY1A-PR3Q6Q5H1 AKR1YDR264C 2295 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 YIL169CYIL169C 2988 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 UBP15YMR304W 3693 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 TTI1YKL033W 3117 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 SCP160YJL080C 3669 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 SLI15YBR156C 2097 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 YCR095W-AYCR095W-A 159 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 YDL247W-AYDL247W-A 75 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 PAA1YDR071C 576 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 APL1YJR005W 2103 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 YMR175W-AYMR175W-A 195 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 YNL103W-AYNL103W-A 90 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 YBR206WYBR206W 324 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 RTT107YHR154W 3213 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 UBP1YDL122W 2430 nt2.31□□□□□ -2.04
TY1A-PR3Q6Q5H1 RTT101YJL047C 2529 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 COG4YPR105C 2586 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 SSD1YDR293C 3753 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 CMC4YMR194C-B 222 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 YOR073W-AYOR073W-A 234 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 YOR019WYOR019W 2193 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 NUM1YDR150W 8247 nt2.3□□□□□ -2.04
TY1A-PR3Q6Q5H1 YFR012W-AYFR012W-A 87 nt2.29□□□□□ -2.04
TY1A-PR3Q6Q5H1 NEW1YPL226W 3591 nt2.28□□□□□ -2.04
TY1A-PR3Q6Q5H1 RAV1YJR033C 4074 nt2.28□□□□□ -2.04
TY1A-PR3Q6Q5H1 YIL002W-AYIL002W-A 210 nt2.28□□□□□ -2.04
TY1A-PR3Q6Q5H1 YJL026C-AYJL026C-A 222 nt2.28□□□□□ -2.04
TY1A-PR3Q6Q5H1 YCR087C-AYCR087C-A 462 nt2.27□□□□□ -2.05
TY1A-PR3Q6Q5H1 YMR122W-AYMR122W-A 255 nt2.27□□□□□ -2.05
TY1A-PR3Q6Q5H1 YNL211CYNL211C 261 nt2.27□□□□□ -2.05
TY1A-PR3Q6Q5H1 CHC1YGL206C 4962 nt2.27□□□□□ -2.05
TY1A-PR3Q6Q5H1 PSD2YGR170W 3417 nt2.27□□□□□ -2.05
TY1A-PR3Q6Q5H1 tL(UAA)QtL(UAA)Q 85 nt2.26□□□□□ -2.05
TY1A-PR3Q6Q5H1 CDC31YOR257W 486 nt2.26□□□□□ -2.05
TY1A-PR3Q6Q5H1 RPL33AYPL143W 324 nt2.26□□□□□ -2.05
TY1A-PR3Q6Q5H1 ADR1YDR216W 3972 nt2.26□□□□□ -2.05
TY1A-PR3Q6Q5H1 YEF3YLR249W 3135 nt2.25□□□□□ -2.05
TY1A-PR3Q6Q5H1 YNL144CYNL144C 2223 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 35.1 ms