Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 FIG4YNL325C 2640 nt0.93□□□□□ -2.26
BER1Q06688 YDL011CYDL011C 324 nt0.93□□□□□ -2.26
BER1Q06688 NPC2YDL046W 522 nt0.93□□□□□ -2.26
BER1Q06688 YMR141W-AYMR141W-A 225 nt0.93□□□□□ -2.26
BER1Q06688 YBR200W-AYBR200W-A 165 nt0.93□□□□□ -2.26
BER1Q06688 NUP157YER105C 4176 nt0.93□□□□□ -2.26
BER1Q06688 YDL032WYDL032W 312 nt0.92□□□□□ -2.26
BER1Q06688 tV(UAC)BtV(UAC)B 74 nt0.92□□□□□ -2.26
BER1Q06688 tV(UAC)DtV(UAC)D 74 nt0.92□□□□□ -2.26
BER1Q06688 YKL202WYKL202W 582 nt0.92□□□□□ -2.26
BER1Q06688 YLR287CYLR287C 1068 nt0.92□□□□□ -2.26
BER1Q06688 YMR242W-AYMR242W-A 90 nt0.92□□□□□ -2.26
BER1Q06688 IRC23YOR044W 474 nt0.92□□□□□ -2.26
BER1Q06688 LOA1YPR139C 903 nt0.92□□□□□ -2.26
BER1Q06688 DIE2YGR227W 1578 nt0.91□□□□□ -2.26
BER1Q06688 KAP120YPL125W 3099 nt0.91□□□□□ -2.26
BER1Q06688 ZIP2YGL249W 2115 nt0.91□□□□□ -2.26
BER1Q06688 RTT102YGR275W 474 nt0.91□□□□□ -2.26
BER1Q06688 YJL020W-AYJL020W-A 258 nt0.91□□□□□ -2.26
BER1Q06688 TOM22YNL131W 459 nt0.91□□□□□ -2.26
BER1Q06688 MMS4YBR098W 2076 nt0.91□□□□□ -2.26
BER1Q06688 SLI15YBR156C 2097 nt0.91□□□□□ -2.26
BER1Q06688 PDE2YOR360C 1581 nt0.91□□□□□ -2.26
BER1Q06688 YLR101CYLR101C 396 nt0.9□□□□□ -2.27
BER1Q06688 YOR199WYOR199W 330 nt0.9□□□□□ -2.27
BER1Q06688 YJR003CYJR003C 1560 nt0.9□□□□□ -2.27
BER1Q06688 AIM9YER080W 1884 nt0.9□□□□□ -2.27
BER1Q06688 HCH1YNL281W 462 nt0.89□□□□□ -2.27
BER1Q06688 snR41snR41 95 nt0.89□□□□□ -2.27
BER1Q06688 COG4YPR105C 2586 nt0.88□□□□□ -2.27
BER1Q06688 CBS1YDL069C 690 nt0.88□□□□□ -2.27
BER1Q06688 YER006C-AYER006C-A 318 nt0.88□□□□□ -2.27
BER1Q06688 ATP19YOL077W-A 207 nt0.88□□□□□ -2.27
BER1Q06688 BEM2YER155C 6504 nt0.88□□□□□ -2.27
BER1Q06688 SIP4YJL089W 2490 nt0.88□□□□□ -2.27
BER1Q06688 SMC1YFL008W 3678 nt0.87□□□□□ -2.27
BER1Q06688 YJL135WYJL135W 318 nt0.87□□□□□ -2.27
BER1Q06688 UBC7YMR022W 498 nt0.87□□□□□ -2.27
BER1Q06688 YOR108C-AYOR108C-A 210 nt0.87□□□□□ -2.27
BER1Q06688 RPB10YOR210W 213 nt0.87□□□□□ -2.27
BER1Q06688 YDL206WYDL206W 2289 nt0.87□□□□□ -2.27
BER1Q06688 YOL160WYOL160W 342 nt0.85□□□□□ -2.27
BER1Q06688 SCC2YDR180W 4482 nt0.85□□□□□ -2.27
BER1Q06688 YDR169C-AYDR169C-A 150 nt0.84□□□□□ -2.27
BER1Q06688 YPL229WYPL229W 621 nt0.84□□□□□ -2.27
BER1Q06688 YGR130CYGR130C 2451 nt0.83□□□□□ -2.28
BER1Q06688 BUD3YCL014W 4911 nt0.83□□□□□ -2.28
BER1Q06688 snR72snR72 98 nt0.83□□□□□ -2.28
BER1Q06688 YGR042WYGR042W 816 nt0.83□□□□□ -2.28
BER1Q06688 YHR052W-AYHR052W-A 195 nt0.83□□□□□ -2.28
BER1Q06688 YHR054W-AYHR054W-A 195 nt0.83□□□□□ -2.28
BER1Q06688 YML003WYML003W 873 nt0.83□□□□□ -2.28
BER1Q06688 YMR290W-AYMR290W-A 348 nt0.83□□□□□ -2.28
BER1Q06688 YPL261CYPL261C 309 nt0.83□□□□□ -2.28
BER1Q06688 snR51snR51 107 nt0.83□□□□□ -2.28
BER1Q06688 YDL073WYDL073W 2955 nt0.83□□□□□ -2.28
BER1Q06688 RIM20YOR275C 1986 nt0.83□□□□□ -2.28
BER1Q06688 IFH1YLR223C 3258 nt0.82□□□□□ -2.28
BER1Q06688 PAN2YGL094C 3348 nt0.82□□□□□ -2.28
BER1Q06688 YAR009CYAR009C 3591 nt0.82□□□□□ -2.28
BER1Q06688 YDL196WYDL196W 330 nt0.82□□□□□ -2.28
BER1Q06688 MRPL50YNR022C 420 nt0.82□□□□□ -2.28
BER1Q06688 WAR1YML076C 2835 nt0.82□□□□□ -2.28
BER1Q06688 YAP6YDR259C 1152 nt0.81□□□□□ -2.28
BER1Q06688 SDH7YDR511W 402 nt0.81□□□□□ -2.28
BER1Q06688 GPG1YGL121C 381 nt0.81□□□□□ -2.28
BER1Q06688 YHL041WYHL041W 450 nt0.81□□□□□ -2.28
BER1Q06688 YKL083WYKL083W 615 nt0.8□□□□□ -2.28
BER1Q06688 YAR047CYAR047C 321 nt0.8□□□□□ -2.28
BER1Q06688 DOP1YDR141C 5097 nt0.8□□□□□ -2.28
BER1Q06688 RAD34YDR314C 2079 nt0.79□□□□□ -2.28
BER1Q06688 RPL26AYLR344W 384 nt0.79□□□□□ -2.28
BER1Q06688 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
BER1Q06688 IML1YJR138W 4755 nt0.79□□□□□ -2.28
BER1Q06688 PRP16YKR086W 3216 nt0.78□□□□□ -2.28
BER1Q06688 PKH2YOL100W 3246 nt0.77□□□□□ -2.29
BER1Q06688 YHL042WYHL042W 453 nt0.77□□□□□ -2.29
BER1Q06688 INP2YMR163C 2118 nt0.77□□□□□ -2.29
BER1Q06688 PCF11YDR228C 1881 nt0.76□□□□□ -2.29
BER1Q06688 SWF1YDR126W 1011 nt0.76□□□□□ -2.29
BER1Q06688 ISF1YMR081C 1017 nt0.76□□□□□ -2.29
BER1Q06688 YNL058CYNL058C 951 nt0.76□□□□□ -2.29
BER1Q06688 PAU24YBR301W 363 nt0.76□□□□□ -2.29
BER1Q06688 PAC1YOR269W 1485 nt0.75□□□□□ -2.29
BER1Q06688 RPS24BYIL069C 408 nt0.75□□□□□ -2.29
BER1Q06688 YBL008W-AYBL008W-A 240 nt0.75□□□□□ -2.29
BER1Q06688 RKR1YMR247C 4689 nt0.75□□□□□ -2.29
BER1Q06688 ISD11YER048W-A 285 nt0.74□□□□□ -2.29
BER1Q06688 GEA2YEL022W 4380 nt0.73□□□□□ -2.29
BER1Q06688 ATG31YDR022C 591 nt0.73□□□□□ -2.29
BER1Q06688 YGR174W-AYGR174W-A 87 nt0.73□□□□□ -2.29
BER1Q06688 YIR044CYIR044C 186 nt0.73□□□□□ -2.29
BER1Q06688 DBP6YNR038W 1890 nt0.73□□□□□ -2.29
BER1Q06688 NIP100YPL174C 2607 nt0.72□□□□□ -2.29
BER1Q06688 ALG13YGL047W 609 nt0.72□□□□□ -2.29
BER1Q06688 IES4YOR189W 351 nt0.72□□□□□ -2.29
BER1Q06688 CUL3YGR003W 2235 nt0.71□□□□□ -2.3
BER1Q06688 YLR456WYLR456W 615 nt0.71□□□□□ -2.3
BER1Q06688 RPS20YHL015W 366 nt0.7□□□□□ -2.3
BER1Q06688 MAM33YIL070C 801 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 87.2 ms