Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	RPL42B	YHR141C	321 nt		-1.48	□□□□□ -2.65
DDR2	P89113	RRT1	YBL048W	312 nt		-1.48	□□□□□ -2.65
DDR2	P89113	RPL42A	YNL162W	321 nt		-1.48	□□□□□ -2.65
DDR2	P89113	YLR402W	YLR402W	192 nt		-1.49	□□□□□ -2.65
DDR2	P89113	YAL067W-A	YAL067W-A	228 nt		-1.5	□□□□□ -2.65
DDR2	P89113	RPS25B	YLR333C	327 nt		-1.5	□□□□□ -2.65
DDR2	P89113	YPR160W-A	YPR160W-A	81 nt		-1.51	□□□□□ -2.65
DDR2	P89113	YDL007C-A	YDL007C-A	258 nt		-1.53	□□□□□ -2.65
DDR2	P89113	YGL204C	YGL204C	306 nt		-1.53	□□□□□ -2.65
DDR2	P89113	YJL049W	YJL049W	1353 nt		-1.53	□□□□□ -2.65
DDR2	P89113	PRP21	YJL203W	843 nt		-1.53	□□□□□ -2.65
DDR2	P89113	YMR141W-A	YMR141W-A	225 nt		-1.53	□□□□□ -2.65
DDR2	P89113	YBR121C-A	YBR121C-A	159 nt		-1.54	□□□□□ -2.66
DDR2	P89113	AFB1	YLR040C	675 nt		-1.55	□□□□□ -2.66
DDR2	P89113	YML007C-A	YML007C-A	111 nt		-1.55	□□□□□ -2.66
DDR2	P89113	YMR075C-A	YMR075C-A	366 nt		-1.55	□□□□□ -2.66
DDR2	P89113	GRX5	YPL059W	453 nt		-1.55	□□□□□ -2.66
DDR2	P89113	YDR182W-A	YDR182W-A	204 nt		-1.56	□□□□□ -2.66
DDR2	P89113	PEX15	YOL044W	1152 nt		-1.56	□□□□□ -2.66
DDR2	P89113	YBR184W	YBR184W	1572 nt		-1.57	□□□□□ -2.66
DDR2	P89113	MMS21	YEL019C	804 nt		-1.58	□□□□□ -2.66
DDR2	P89113	YIL071W-A	YIL071W-A	477 nt		-1.58	□□□□□ -2.66
DDR2	P89113	IRC2	YDR112W	309 nt		-1.59	□□□□□ -2.66
DDR2	P89113	ATC1	YDR184C	885 nt		-1.6	□□□□□ -2.67
DDR2	P89113	YJR079W	YJR079W	330 nt		-1.6	□□□□□ -2.67
DDR2	P89113	YNL319W	YNL319W	441 nt		-1.6	□□□□□ -2.67
DDR2	P89113	YOR015W	YOR015W	360 nt		-1.6	□□□□□ -2.67
DDR2	P89113	MRPL24	YMR193W	777 nt		-1.61	□□□□□ -2.67
DDR2	P89113	SST2	YLR452C	2097 nt		-1.63	□□□□□ -2.67
DDR2	P89113	VAB2	YEL005C	849 nt		-1.63	□□□□□ -2.67
DDR2	P89113	YHR028W-A	YHR028W-A	321 nt		-1.63	□□□□□ -2.67
DDR2	P89113	BI4	Q0120	1917 nt		-1.64	□□□□□ -2.67
DDR2	P89113	GPG1	YGL121C	381 nt		-1.64	□□□□□ -2.67
DDR2	P89113	IST3	YIR005W	447 nt		-1.64	□□□□□ -2.67
DDR2	P89113	AI4	Q0065	1671 nt		-1.64	□□□□□ -2.67
DDR2	P89113	YDL068W	YDL068W	330 nt		-1.65	□□□□□ -2.67
DDR2	P89113	tA(UGC)Q	tA(UGC)Q	76 nt		-1.65	□□□□□ -2.67
DDR2	P89113	YDR194W-A	YDR194W-A	153 nt		-1.65	□□□□□ -2.67
DDR2	P89113	PHO80	YOL001W	882 nt		-1.65	□□□□□ -2.67
DDR2	P89113	YDL009C	YDL009C	324 nt		-1.66	□□□□□ -2.68
DDR2	P89113	YOR248W	YOR248W	303 nt		-1.66	□□□□□ -2.68
DDR2	P89113	SEM1	YDR363W-A	270 nt		-1.67	□□□□□ -2.68
DDR2	P89113	YHR054C	YHR054C	1065 nt		-1.67	□□□□□ -2.68
DDR2	P89113	YPR172W	YPR172W	603 nt		-1.67	□□□□□ -2.68
DDR2	P89113	snR44	snR44	211 nt		-1.67	□□□□□ -2.68
DDR2	P89113	YHR131W-A	YHR131W-A	246 nt		-1.68	□□□□□ -2.68
DDR2	P89113	EST1	YLR233C	2100 nt		-1.68	□□□□□ -2.68
DDR2	P89113	YLR399W-A	YLR399W-A	105 nt		-1.68	□□□□□ -2.68
DDR2	P89113	RTR2	YDR066C	591 nt		-1.69	□□□□□ -2.68
DDR2	P89113	YFR012W-A	YFR012W-A	87 nt		-1.69	□□□□□ -2.68
DDR2	P89113	RFA3	YJL173C	369 nt		-1.69	□□□□□ -2.68
DDR2	P89113	YLR287C	YLR287C	1068 nt		-1.69	□□□□□ -2.68
DDR2	P89113	BI3	Q0115	1554 nt		-1.69	□□□□□ -2.68
DDR2	P89113	YLR282C	YLR282C	342 nt		-1.7	□□□□□ -2.68
DDR2	P89113	PCL2	YDL127W	927 nt		-1.71	□□□□□ -2.68
DDR2	P89113	ECL1	YGR146C	636 nt		-1.72	□□□□□ -2.68
DDR2	P89113	ATG31	YDR022C	591 nt		-1.73	□□□□□ -2.69
DDR2	P89113	GIC2	YDR309C	1152 nt		-1.73	□□□□□ -2.69
DDR2	P89113	ATP15	YPL271W	189 nt		-1.73	□□□□□ -2.69
DDR2	P89113	LSO2	YGR169C-A	279 nt		-1.74	□□□□□ -2.69
DDR2	P89113	YPL185W	YPL185W	396 nt		-1.74	□□□□□ -2.69
DDR2	P89113	COX8	YLR395C	237 nt		-1.75	□□□□□ -2.69
DDR2	P89113	PFS1	YHR185C	714 nt		-1.76	□□□□□ -2.69
DDR2	P89113	YER079W	YER079W	633 nt		-1.77	□□□□□ -2.69
DDR2	P89113	UBS1	YBR165W	834 nt		-1.77	□□□□□ -2.69
DDR2	P89113	MRPL25	YGR076C	474 nt		-1.78	□□□□□ -2.69
DDR2	P89113	YLR198C	YLR198C	360 nt		-1.78	□□□□□ -2.69
DDR2	P89113	BLS1	YLR408C	369 nt		-1.78	□□□□□ -2.69
DDR2	P89113	SNU56	YDR240C	1479 nt		-1.78	□□□□□ -2.69
DDR2	P89113	SPO21	YOL091W	1830 nt		-1.79	□□□□□ -2.7
DDR2	P89113	YBR064W	YBR064W	429 nt		-1.79	□□□□□ -2.7
DDR2	P89113	BET4	YJL031C	984 nt		-1.8	□□□□□ -2.7
DDR2	P89113	GPX1	YKL026C	504 nt		-1.8	□□□□□ -2.7
DDR2	P89113	CMC1	YKL137W	336 nt		-1.8	□□□□□ -2.7
DDR2	P89113	tP(UGG)Q	tP(UGG)Q	72 nt		-1.81	□□□□□ -2.7
DDR2	P89113	YHR138C	YHR138C	345 nt		-1.81	□□□□□ -2.7
DDR2	P89113	YHL048C-A	YHL048C-A	135 nt		-1.82	□□□□□ -2.7
DDR2	P89113	YLL006W-A	YLL006W-A	177 nt		-1.82	□□□□□ -2.7
DDR2	P89113	YIM2	YMR151W	438 nt		-1.82	□□□□□ -2.7
DDR2	P89113	MFA2	YNL145W	117 nt		-1.82	□□□□□ -2.7
DDR2	P89113	tN(GUU)Q	tN(GUU)Q	71 nt		-1.83	□□□□□ -2.7
DDR2	P89113	YKE2	YLR200W	345 nt		-1.83	□□□□□ -2.7
DDR2	P89113	ATX1	YNL259C	222 nt		-1.83	□□□□□ -2.7
DDR2	P89113	RSM23	YGL129C	1353 nt		-1.85	□□□□□ -2.7
DDR2	P89113	YIL066W-A	YIL066W-A	444 nt		-1.85	□□□□□ -2.71
DDR2	P89113	YPL119C-A	YPL119C-A	264 nt		-1.85	□□□□□ -2.71
DDR2	P89113	QCR7	YDR529C	384 nt		-1.86	□□□□□ -2.71
DDR2	P89113	PAA1	YDR071C	576 nt		-1.88	□□□□□ -2.71
DDR2	P89113	YIL089W	YIL089W	618 nt		-1.88	□□□□□ -2.71
DDR2	P89113	YJL114W	YJL114W	681 nt		-1.88	□□□□□ -2.71
DDR2	P89113	SUS1	YBR111W-A	291 nt		-1.88	□□□□□ -2.71
DDR2	P89113	YLL032C	YLL032C	2478 nt		-1.88	□□□□□ -2.71
DDR2	P89113	YER046W-A	YER046W-A	330 nt		-1.9	□□□□□ -2.71
DDR2	P89113	ARV1	YLR242C	966 nt		-1.9	□□□□□ -2.71
DDR2	P89113	FAR3	YMR052W	615 nt		-1.9	□□□□□ -2.71
DDR2	P89113	YAL069W	YAL069W	315 nt		-1.92	□□□□□ -2.72
DDR2	P89113	YBR099C	YBR099C	384 nt		-1.93	□□□□□ -2.72
DDR2	P89113	ZIP2	YGL249W	2115 nt		-1.94	□□□□□ -2.72
DDR2	P89113	YDL152W	YDL152W	366 nt		-1.94	□□□□□ -2.72
DDR2	P89113	YGL258W-A	YGL258W-A	234 nt		-1.94	□□□□□ -2.72

Retrieved 100 of 7,029 protein–RNA pairs in 159.9 ms