Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 YLR269CYLR269C 351 nt0.79□□□□□ -2.28
USE1P53146 YNR025CYNR025C 360 nt0.79□□□□□ -2.28
USE1P53146 YBR076C-AYBR076C-A 267 nt0.79□□□□□ -2.28
USE1P53146 YDL206WYDL206W 2289 nt0.78□□□□□ -2.28
USE1P53146 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
USE1P53146 NPC2YDL046W 522 nt0.77□□□□□ -2.29
USE1P53146 RPF1YHR088W 888 nt0.77□□□□□ -2.29
USE1P53146 RIM20YOR275C 1986 nt0.77□□□□□ -2.29
USE1P53146 SLI15YBR156C 2097 nt0.77□□□□□ -2.29
USE1P53146 YPR117WYPR117W 7470 nt0.76□□□□□ -2.29
USE1P53146 EFR3YMR212C 2349 nt0.76□□□□□ -2.29
USE1P53146 NHP2YDL208W 471 nt0.76□□□□□ -2.29
USE1P53146 YER087C-AYER087C-A 552 nt0.76□□□□□ -2.29
USE1P53146 RPS27AYKL156W 249 nt0.75□□□□□ -2.29
USE1P53146 YPR153WYPR153W 423 nt0.75□□□□□ -2.29
USE1P53146 ZIP2YGL249W 2115 nt0.74□□□□□ -2.29
USE1P53146 YDL196WYDL196W 330 nt0.74□□□□□ -2.29
USE1P53146 YER084W-AYER084W-A 513 nt0.74□□□□□ -2.29
USE1P53146 YML108WYML108W 318 nt0.74□□□□□ -2.29
USE1P53146 YJR003CYJR003C 1560 nt0.73□□□□□ -2.29
USE1P53146 COG4YPR105C 2586 nt0.72□□□□□ -2.29
USE1P53146 YDR521WYDR521W 336 nt0.72□□□□□ -2.29
USE1P53146 TIM13YGR181W 318 nt0.72□□□□□ -2.29
USE1P53146 YKL202WYKL202W 582 nt0.72□□□□□ -2.29
USE1P53146 YOR108C-AYOR108C-A 210 nt0.72□□□□□ -2.29
USE1P53146 PAN2YGL094C 3348 nt0.71□□□□□ -2.3
USE1P53146 WAR1YML076C 2835 nt0.71□□□□□ -2.3
USE1P53146 YGR042WYGR042W 816 nt0.7□□□□□ -2.3
USE1P53146 YHR130CYHR130C 336 nt0.7□□□□□ -2.3
USE1P53146 YJL135WYJL135W 318 nt0.7□□□□□ -2.3
USE1P53146 YMR141W-AYMR141W-A 225 nt0.7□□□□□ -2.3
USE1P53146 YAR009CYAR009C 3591 nt0.69□□□□□ -2.3
USE1P53146 SWF1YDR126W 1011 nt0.69□□□□□ -2.3
USE1P53146 YHR125WYHR125W 306 nt0.69□□□□□ -2.3
USE1P53146 YBL071CYBL071C 309 nt0.69□□□□□ -2.3
USE1P53146 WIP1YDR374W-A 270 nt0.68□□□□□ -2.3
USE1P53146 AIM29YKR074W 468 nt0.68□□□□□ -2.3
USE1P53146 CMC4YMR194C-B 222 nt0.68□□□□□ -2.3
USE1P53146 YMR290W-AYMR290W-A 348 nt0.68□□□□□ -2.3
USE1P53146 ZEO1YOL109W 342 nt0.68□□□□□ -2.3
USE1P53146 CDC33YOL139C 642 nt0.68□□□□□ -2.3
USE1P53146 YDL011CYDL011C 324 nt0.67□□□□□ -2.3
USE1P53146 GPG1YGL121C 381 nt0.67□□□□□ -2.3
USE1P53146 YOL160WYOL160W 342 nt0.67□□□□□ -2.3
USE1P53146 ISD11YER048W-A 285 nt0.66□□□□□ -2.3
USE1P53146 PAM16YJL104W 450 nt0.66□□□□□ -2.3
USE1P53146 RPB10YOR210W 213 nt0.66□□□□□ -2.3
USE1P53146 LOA1YPR139C 903 nt0.66□□□□□ -2.3
USE1P53146 RKR1YMR247C 4689 nt0.65□□□□□ -2.3
USE1P53146 ALG13YGL047W 609 nt0.65□□□□□ -2.31
USE1P53146 YHL042WYHL042W 453 nt0.65□□□□□ -2.31
USE1P53146 YPL261CYPL261C 309 nt0.65□□□□□ -2.31
USE1P53146 DBP6YNR038W 1890 nt0.65□□□□□ -2.31
USE1P53146 YDL158CYDL158C 309 nt0.64□□□□□ -2.31
USE1P53146 YEL050W-AYEL050W-A 192 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)JtT(AGU)J 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)N1tT(AGU)N1 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)N2tT(AGU)N2 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)O1tT(AGU)O1 73 nt0.64□□□□□ -2.31
USE1P53146 tT(AGU)O2tT(AGU)O2 73 nt0.64□□□□□ -2.31
USE1P53146 YJL020W-AYJL020W-A 258 nt0.64□□□□□ -2.31
USE1P53146 YLR287CYLR287C 1068 nt0.64□□□□□ -2.31
USE1P53146 IES4YOR189W 351 nt0.64□□□□□ -2.31
USE1P53146 snR54snR54 86 nt0.64□□□□□ -2.31
USE1P53146 PAC1YOR269W 1485 nt0.63□□□□□ -2.31
USE1P53146 BI2Q0110 1272 nt0.63□□□□□ -2.31
USE1P53146 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
USE1P53146 YNL122CYNL122C 348 nt0.63□□□□□ -2.31
USE1P53146 PKH2YOL100W 3246 nt0.62□□□□□ -2.31
USE1P53146 RAD34YDR314C 2079 nt0.62□□□□□ -2.31
USE1P53146 YOR192C-CYOR192C-C 237 nt0.62□□□□□ -2.31
USE1P53146 snR72snR72 98 nt0.61□□□□□ -2.31
USE1P53146 YMR031W-AYMR031W-A 327 nt0.61□□□□□ -2.31
USE1P53146 snR51snR51 107 nt0.61□□□□□ -2.31
USE1P53146 DIE2YGR227W 1578 nt0.61□□□□□ -2.31
USE1P53146 YGR290WYGR290W 444 nt0.6□□□□□ -2.31
USE1P53146 YOR282WYOR282W 321 nt0.6□□□□□ -2.31
USE1P53146 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
USE1P53146 GEA2YEL022W 4380 nt0.59□□□□□ -2.31
USE1P53146 YPL229WYPL229W 621 nt0.59□□□□□ -2.31
USE1P53146 BFR2YDR299W 1605 nt0.59□□□□□ -2.32
USE1P53146 SDH7YDR511W 402 nt0.58□□□□□ -2.32
USE1P53146 FYV7YLR068W 456 nt0.58□□□□□ -2.32
USE1P53146 YLR171WYLR171W 390 nt0.58□□□□□ -2.32
USE1P53146 ECL1YGR146C 636 nt0.57□□□□□ -2.32
USE1P53146 YHR063W-AYHR063W-A 336 nt0.57□□□□□ -2.32
USE1P53146 YIL142C-AYIL142C-A 333 nt0.57□□□□□ -2.32
USE1P53146 YIR044CYIR044C 186 nt0.57□□□□□ -2.32
USE1P53146 ECM12YHR021W-A 456 nt0.56□□□□□ -2.32
USE1P53146 YBL008W-AYBL008W-A 240 nt0.56□□□□□ -2.32
USE1P53146 YOL013W-BYOL013W-B 291 nt0.56□□□□□ -2.32
USE1P53146 INP2YMR163C 2118 nt0.56□□□□□ -2.32
USE1P53146 LTE1YAL024C 4308 nt0.56□□□□□ -2.32
USE1P53146 NOP9YJL010C 2001 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms