Protein–RNA interactions for Protein: P25043

PUP1, Proteasome subunit beta type-2, yeastyeast

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUP1P25043 YCR087C-AYCR087C-A 462 nt2.71□□□□□ -1.98
PUP1P25043 TIM9YEL020W-A 264 nt2.71□□□□□ -1.98
PUP1P25043 SCP160YJL080C 3669 nt2.71□□□□□ -1.98
PUP1P25043 ACM1YPL267W 630 nt2.7□□□□□ -1.98
PUP1P25043 RAV1YJR033C 4074 nt2.7□□□□□ -1.98
PUP1P25043 ALK1YGL021W 2283 nt2.7□□□□□ -1.98
PUP1P25043 IST2YBR086C 2841 nt2.69□□□□□ -1.98
PUP1P25043 YPR097WYPR097W 3222 nt2.68□□□□□ -1.98
PUP1P25043 YIL169CYIL169C 2988 nt2.68□□□□□ -1.98
PUP1P25043 YBL005W-BYBL005W-B 5268 nt2.68□□□□□ -1.98
PUP1P25043 ECM29YHL030W 5607 nt2.68□□□□□ -1.98
PUP1P25043 SEY1YOR165W 2331 nt2.67□□□□□ -1.98
PUP1P25043 YDR521WYDR521W 336 nt2.67□□□□□ -1.98
PUP1P25043 APL5YPL195W 2799 nt2.67□□□□□ -1.98
PUP1P25043 PKH2YOL100W 3246 nt2.67□□□□□ -1.98
PUP1P25043 IFH1YLR223C 3258 nt2.67□□□□□ -1.98
PUP1P25043 SLI15YBR156C 2097 nt2.67□□□□□ -1.98
PUP1P25043 TOM1YDR457W 9807 nt2.66□□□□□ -1.98
PUP1P25043 YHL015W-AYHL015W-A 84 nt2.65□□□□□ -1.99
PUP1P25043 YLR012CYLR012C 300 nt2.65□□□□□ -1.99
PUP1P25043 YMR122W-AYMR122W-A 255 nt2.65□□□□□ -1.99
PUP1P25043 YMR175W-AYMR175W-A 195 nt2.64□□□□□ -1.99
PUP1P25043 HER1YOR227W 3741 nt2.64□□□□□ -1.99
PUP1P25043 SIR4YDR227W 4077 nt2.63□□□□□ -1.99
PUP1P25043 YBL053WYBL053W 375 nt2.63□□□□□ -1.99
PUP1P25043 COG4YPR105C 2586 nt2.62□□□□□ -1.99
PUP1P25043 TAO3YIL129C 7131 nt2.62□□□□□ -1.99
PUP1P25043 YDR098C-BYDR098C-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YDR210C-DYDR210C-D 5268 nt2.62□□□□□ -1.99
PUP1P25043 YDR316W-BYDR316W-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YDR365W-BYDR365W-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YER138CYER138C 5268 nt2.62□□□□□ -1.99
PUP1P25043 YER160CYER160C 5268 nt2.62□□□□□ -1.99
PUP1P25043 YGR038C-BYGR038C-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YGR161C-DYGR161C-D 5268 nt2.62□□□□□ -1.99
PUP1P25043 YJR027WYJR027W 5268 nt2.62□□□□□ -1.99
PUP1P25043 YLR157C-BYLR157C-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YML039WYML039W 5268 nt2.62□□□□□ -1.99
PUP1P25043 YML045WYML045W 5268 nt2.62□□□□□ -1.99
PUP1P25043 YMR050CYMR050C 5268 nt2.62□□□□□ -1.99
PUP1P25043 YOL103W-BYOL103W-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YBR012W-BYBR012W-B 5271 nt2.62□□□□□ -1.99
PUP1P25043 YOR142W-BYOR142W-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YPL257W-BYPL257W-B 5268 nt2.62□□□□□ -1.99
PUP1P25043 YPR158W-BYPR158W-B 5271 nt2.62□□□□□ -1.99
PUP1P25043 FLO11YIR019C 4104 nt2.61□□□□□ -1.99
PUP1P25043 HSL1YKL101W 4557 nt2.61□□□□□ -1.99
PUP1P25043 YNL144CYNL144C 2223 nt2.61□□□□□ -1.99
PUP1P25043 YOR102WYOR102W 351 nt2.61□□□□□ -1.99
PUP1P25043 GCN2YDR283C 4980 nt2.61□□□□□ -1.99
PUP1P25043 SEC63YOR254C 1992 nt2.61□□□□□ -1.99
PUP1P25043 tK(UUU)DtK(UUU)D 73 nt2.6□□□□□ -1.99
PUP1P25043 tK(UUU)G1tK(UUU)G1 73 nt2.6□□□□□ -1.99
PUP1P25043 tK(UUU)G2tK(UUU)G2 73 nt2.6□□□□□ -1.99
PUP1P25043 tK(UUU)KtK(UUU)K 73 nt2.6□□□□□ -1.99
PUP1P25043 tK(UUU)LtK(UUU)L 73 nt2.6□□□□□ -1.99
PUP1P25043 tK(UUU)OtK(UUU)O 73 nt2.6□□□□□ -1.99
PUP1P25043 tK(UUU)PtK(UUU)P 73 nt2.6□□□□□ -1.99
PUP1P25043 BPT1YLL015W 4680 nt2.59□□□□□ -1.99
PUP1P25043 YDL118WYDL118W 381 nt2.59□□□□□ -1.99
PUP1P25043 YOR314W-AYOR314W-A 111 nt2.59□□□□□ -1.99
PUP1P25043 YPL044CYPL044C 549 nt2.59□□□□□ -1.99
PUP1P25043 AKR1YDR264C 2295 nt2.59□□□□□ -1.99
PUP1P25043 YPL150WYPL150W 2706 nt2.59□□□□□ -2
PUP1P25043 CHC1YGL206C 4962 nt2.59□□□□□ -2
PUP1P25043 ADR1YDR216W 3972 nt2.59□□□□□ -2
PUP1P25043 SAP185YJL098W 3177 nt2.58□□□□□ -2
PUP1P25043 MSH6YDR097C 3729 nt2.58□□□□□ -2
PUP1P25043 SFB2YNL049C 2631 nt2.58□□□□□ -2
PUP1P25043 TRM3YDL112W 4311 nt2.58□□□□□ -2
PUP1P25043 YDR354C-AYDR354C-A 144 nt2.56□□□□□ -2
PUP1P25043 RPS30BYOR182C 192 nt2.56□□□□□ -2
PUP1P25043 YBR206WYBR206W 324 nt2.56□□□□□ -2
PUP1P25043 SLH1YGR271W 5904 nt2.56□□□□□ -2
PUP1P25043 APL1YJR005W 2103 nt2.56□□□□□ -2
PUP1P25043 CTF4YPR135W 2784 nt2.55□□□□□ -2
PUP1P25043 SUP56tL(CAA)A 82 nt2.55□□□□□ -2
PUP1P25043 SUP53tL(CAA)C 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)DtL(CAA)D 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)G1tL(CAA)G1 82 nt2.55□□□□□ -2
PUP1P25043 SUP54tL(CAA)G2 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)G3tL(CAA)G3 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)KtL(CAA)K 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)LtL(CAA)L 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)MtL(CAA)M 82 nt2.55□□□□□ -2
PUP1P25043 tL(CAA)NtL(CAA)N 82 nt2.55□□□□□ -2
PUP1P25043 SAP1YER047C 2694 nt2.55□□□□□ -2
PUP1P25043 UTP21YLR409C 2820 nt2.54□□□□□ -2
PUP1P25043 PNC1YGL037C 651 nt2.54□□□□□ -2
PUP1P25043 YJL022WYJL022W 309 nt2.54□□□□□ -2
PUP1P25043 SLN1YIL147C 3663 nt2.54□□□□□ -2
PUP1P25043 TTI1YKL033W 3117 nt2.53□□□□□ -2
PUP1P25043 YOR343W-BYOR343W-B 5313 nt2.53□□□□□ -2
PUP1P25043 YDR209CYDR209C 414 nt2.53□□□□□ -2
PUP1P25043 YGL063C-AYGL063C-A 150 nt2.53□□□□□ -2
PUP1P25043 YJL026C-AYJL026C-A 222 nt2.53□□□□□ -2
PUP1P25043 RGC1YPR115W 3252 nt2.53□□□□□ -2
PUP1P25043 MSB2YGR014W 3921 nt2.52□□□□□ -2.01
PUP1P25043 PAA1YDR071C 576 nt2.52□□□□□ -2.01
PUP1P25043 YIL174WYIL174W 228 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 46.5 ms