Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YDR341CYDR341C 1824 nt2.42□□□□□ -2.02
TY1A-LR2P0CX72 PET309YLR067C 2898 nt2.41□□□□□ -2.02
TY1A-LR2P0CX72 UBR1YGR184C 5853 nt2.41□□□□□ -2.02
TY1A-LR2P0CX72 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
TY1A-LR2P0CX72 TRA1YHR099W 11235 nt2.41□□□□□ -2.02
TY1A-LR2P0CX72 MSH5YDL154W 2706 nt2.4□□□□□ -2.02
TY1A-LR2P0CX72 TRL1YJL087C 2484 nt2.4□□□□□ -2.03
TY1A-LR2P0CX72 YER053C-AYER053C-A 114 nt2.4□□□□□ -2.03
TY1A-LR2P0CX72 YIL174WYIL174W 228 nt2.4□□□□□ -2.03
TY1A-LR2P0CX72 YJL222W-AYJL222W-A 228 nt2.4□□□□□ -2.03
TY1A-LR2P0CX72 CTR9YOL145C 3234 nt2.4□□□□□ -2.03
TY1A-LR2P0CX72 SGM1YJR134C 2124 nt2.39□□□□□ -2.03
TY1A-LR2P0CX72 YIL071W-AYIL071W-A 477 nt2.39□□□□□ -2.03
TY1A-LR2P0CX72 RPS17AYML024W 411 nt2.39□□□□□ -2.03
TY1A-LR2P0CX72 ALK1YGL021W 2283 nt2.39□□□□□ -2.03
TY1A-LR2P0CX72 AGC1YPR021C 2709 nt2.39□□□□□ -2.03
TY1A-LR2P0CX72 SKP2YNL311C 2292 nt2.38□□□□□ -2.03
TY1A-LR2P0CX72 IRE1YHR079C 3348 nt2.38□□□□□ -2.03
TY1A-LR2P0CX72 AXL1YPR122W 3627 nt2.38□□□□□ -2.03
TY1A-LR2P0CX72 RSE1YML049C 4086 nt2.37□□□□□ -2.03
TY1A-LR2P0CX72 IFH1YLR223C 3258 nt2.37□□□□□ -2.03
TY1A-LR2P0CX72 RPS30BYOR182C 192 nt2.37□□□□□ -2.03
TY1A-LR2P0CX72 YIL082W-AYIL082W-A 4497 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 PKH2YOL100W 3246 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YCR038W-AYCR038W-A 126 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YDR521WYDR521W 336 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YIL134C-AYIL134C-A 204 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YBR099CYBR099C 384 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YDR098C-BYDR098C-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YDR210C-DYDR210C-D 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YDR316W-BYDR316W-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YDR365W-BYDR365W-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YER138CYER138C 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YER160CYER160C 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YGR038C-BYGR038C-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YGR161C-DYGR161C-D 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YJR027WYJR027W 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YLR157C-BYLR157C-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YML039WYML039W 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YML045WYML045W 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YMR050CYMR050C 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YOL103W-BYOL103W-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YBR012W-BYBR012W-B 5271 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YOR142W-BYOR142W-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YPL257W-BYPL257W-B 5268 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 YPR158W-BYPR158W-B 5271 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 SYH1YPL105C 2550 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 MSB2YGR014W 3921 nt2.36□□□□□ -2.03
TY1A-LR2P0CX72 RPA190YOR341W 4995 nt2.35□□□□□ -2.03
TY1A-LR2P0CX72 YDR354C-AYDR354C-A 144 nt2.35□□□□□ -2.03
TY1A-LR2P0CX72 PMP2YEL017C-A 132 nt2.35□□□□□ -2.03
TY1A-LR2P0CX72 COX12YLR038C 252 nt2.34□□□□□ -2.03
TY1A-LR2P0CX72 FRK1YPL141C 2598 nt2.34□□□□□ -2.04
TY1A-LR2P0CX72 MLH1YMR167W 2310 nt2.34□□□□□ -2.04
TY1A-LR2P0CX72 KRE33YNL132W 3171 nt2.33□□□□□ -2.04
TY1A-LR2P0CX72 YKR075W-AYKR075W-A 270 nt2.33□□□□□ -2.04
TY1A-LR2P0CX72 GIP3YPL137C 3831 nt2.33□□□□□ -2.04
TY1A-LR2P0CX72 ESL2YKR096W 3588 nt2.32□□□□□ -2.04
TY1A-LR2P0CX72 RPL37BYDR500C 267 nt2.32□□□□□ -2.04
TY1A-LR2P0CX72 YHR217CYHR217C 462 nt2.32□□□□□ -2.04
TY1A-LR2P0CX72 PRP5YBR237W 2550 nt2.32□□□□□ -2.04
TY1A-LR2P0CX72 STE6YKL209C 3873 nt2.32□□□□□ -2.04
TY1A-LR2P0CX72 AKR1YDR264C 2295 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 YIL169CYIL169C 2988 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 UBP15YMR304W 3693 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 TTI1YKL033W 3117 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 SCP160YJL080C 3669 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 SLI15YBR156C 2097 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 YCR095W-AYCR095W-A 159 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 YDL247W-AYDL247W-A 75 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 PAA1YDR071C 576 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 APL1YJR005W 2103 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 YMR175W-AYMR175W-A 195 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 YNL103W-AYNL103W-A 90 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 YBR206WYBR206W 324 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 RTT107YHR154W 3213 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 UBP1YDL122W 2430 nt2.31□□□□□ -2.04
TY1A-LR2P0CX72 RTT101YJL047C 2529 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 COG4YPR105C 2586 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 SSD1YDR293C 3753 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 CMC4YMR194C-B 222 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 YOR073W-AYOR073W-A 234 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 YOR019WYOR019W 2193 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 NUM1YDR150W 8247 nt2.3□□□□□ -2.04
TY1A-LR2P0CX72 YFR012W-AYFR012W-A 87 nt2.29□□□□□ -2.04
TY1A-LR2P0CX72 NEW1YPL226W 3591 nt2.28□□□□□ -2.04
TY1A-LR2P0CX72 RAV1YJR033C 4074 nt2.28□□□□□ -2.04
TY1A-LR2P0CX72 YIL002W-AYIL002W-A 210 nt2.28□□□□□ -2.04
TY1A-LR2P0CX72 YJL026C-AYJL026C-A 222 nt2.28□□□□□ -2.04
TY1A-LR2P0CX72 YCR087C-AYCR087C-A 462 nt2.27□□□□□ -2.05
TY1A-LR2P0CX72 YMR122W-AYMR122W-A 255 nt2.27□□□□□ -2.05
TY1A-LR2P0CX72 YNL211CYNL211C 261 nt2.27□□□□□ -2.05
TY1A-LR2P0CX72 CHC1YGL206C 4962 nt2.27□□□□□ -2.05
TY1A-LR2P0CX72 PSD2YGR170W 3417 nt2.27□□□□□ -2.05
TY1A-LR2P0CX72 tL(UAA)QtL(UAA)Q 85 nt2.26□□□□□ -2.05
TY1A-LR2P0CX72 CDC31YOR257W 486 nt2.26□□□□□ -2.05
TY1A-LR2P0CX72 RPL33AYPL143W 324 nt2.26□□□□□ -2.05
TY1A-LR2P0CX72 ADR1YDR216W 3972 nt2.26□□□□□ -2.05
TY1A-LR2P0CX72 YEF3YLR249W 3135 nt2.25□□□□□ -2.05
TY1A-LR2P0CX72 YNL144CYNL144C 2223 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 99.5 ms