Protein–RNA interactions for Protein: P0CX36

RPS4B, 40S ribosomal protein S4-B, yeastyeast

Known RBP Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS4BP0CX36 YHR086W-AYHR086W-A 162 nt2.56□□□□□ -2
RPS4BP0CX36 tW(CCA)G1tW(CCA)G1 72 nt2.56□□□□□ -2
RPS4BP0CX36 tW(CCA)G2tW(CCA)G2 72 nt2.56□□□□□ -2
RPS4BP0CX36 tW(CCA)JtW(CCA)J 72 nt2.56□□□□□ -2
RPS4BP0CX36 tW(CCA)KtW(CCA)K 72 nt2.56□□□□□ -2
RPS4BP0CX36 tW(CCA)MtW(CCA)M 72 nt2.56□□□□□ -2
RPS4BP0CX36 tW(CCA)PtW(CCA)P 72 nt2.56□□□□□ -2
RPS4BP0CX36 YMR242W-AYMR242W-A 90 nt2.56□□□□□ -2
RPS4BP0CX36 YCL046WYCL046W 324 nt2.56□□□□□ -2
RPS4BP0CX36 SEC7YDR170C 6030 nt2.56□□□□□ -2
RPS4BP0CX36 INP51YIL002C 2841 nt2.55□□□□□ -2
RPS4BP0CX36 AHC1YOR023C 1701 nt2.55□□□□□ -2
RPS4BP0CX36 NAB6YML117W 3405 nt2.55□□□□□ -2
RPS4BP0CX36 BUB1YGR188C 3066 nt2.55□□□□□ -2
RPS4BP0CX36 PIP2YOR363C 2991 nt2.55□□□□□ -2
RPS4BP0CX36 MET6YER091C 2304 nt2.54□□□□□ -2
RPS4BP0CX36 DNA2YHR164C 4569 nt2.54□□□□□ -2
RPS4BP0CX36 YCR095W-AYCR095W-A 159 nt2.54□□□□□ -2
RPS4BP0CX36 RPL31AYDL075W 342 nt2.54□□□□□ -2
RPS4BP0CX36 PAA1YDR071C 576 nt2.54□□□□□ -2
RPS4BP0CX36 YFR012W-AYFR012W-A 87 nt2.54□□□□□ -2
RPS4BP0CX36 ZIP2YGL249W 2115 nt2.54□□□□□ -2
RPS4BP0CX36 CBF2YGR140W 2871 nt2.53□□□□□ -2
RPS4BP0CX36 CAT2YML042W 2013 nt2.53□□□□□ -2
RPS4BP0CX36 PDR1YGL013C 3207 nt2.53□□□□□ -2
RPS4BP0CX36 YOR108C-AYOR108C-A 210 nt2.53□□□□□ -2
RPS4BP0CX36 VTC3YPL019C 2508 nt2.53□□□□□ -2
RPS4BP0CX36 SSN2YDR443C 4263 nt2.52□□□□□ -2.01
RPS4BP0CX36 GEA1YJR031C 4227 nt2.52□□□□□ -2.01
RPS4BP0CX36 CTF4YPR135W 2784 nt2.51□□□□□ -2.01
RPS4BP0CX36 PBY1YBR094W 2262 nt2.51□□□□□ -2.01
RPS4BP0CX36 YIL134C-AYIL134C-A 204 nt2.51□□□□□ -2.01
RPS4BP0CX36 HSH155YMR288W 2916 nt2.51□□□□□ -2.01
RPS4BP0CX36 ENV11YGR071C 2583 nt2.51□□□□□ -2.01
RPS4BP0CX36 TOM1YDR457W 9807 nt2.5□□□□□ -2.01
RPS4BP0CX36 tL(UAA)QtL(UAA)Q 85 nt2.5□□□□□ -2.01
RPS4BP0CX36 YNL067W-BYNL067W-B 141 nt2.5□□□□□ -2.01
RPS4BP0CX36 MAD1YGL086W 2250 nt2.5□□□□□ -2.01
RPS4BP0CX36 HOS4YIL112W 3252 nt2.5□□□□□ -2.01
RPS4BP0CX36 SAS3YBL052C 2496 nt2.49□□□□□ -2.01
RPS4BP0CX36 YDR098C-BYDR098C-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YDR210C-DYDR210C-D 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YDR316W-BYDR316W-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YDR365W-BYDR365W-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YER138CYER138C 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YER160CYER160C 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YGR038C-BYGR038C-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YGR161C-DYGR161C-D 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YJR027WYJR027W 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YLR157C-BYLR157C-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YML039WYML039W 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YML045WYML045W 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YMR050CYMR050C 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YOL103W-BYOL103W-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YBR012W-BYBR012W-B 5271 nt2.49□□□□□ -2.01
RPS4BP0CX36 YOR142W-BYOR142W-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YPL257W-BYPL257W-B 5268 nt2.49□□□□□ -2.01
RPS4BP0CX36 YPR158W-BYPR158W-B 5271 nt2.49□□□□□ -2.01
RPS4BP0CX36 CDC31YOR257W 486 nt2.49□□□□□ -2.01
RPS4BP0CX36 PRP8YHR165C 7242 nt2.49□□□□□ -2.01
RPS4BP0CX36 SLD3YGL113W 2007 nt2.48□□□□□ -2.01
RPS4BP0CX36 YCR102W-AYCR102W-A 198 nt2.48□□□□□ -2.01
RPS4BP0CX36 YDR209CYDR209C 414 nt2.48□□□□□ -2.01
RPS4BP0CX36 YLR282CYLR282C 342 nt2.48□□□□□ -2.01
RPS4BP0CX36 SAP1YER047C 2694 nt2.48□□□□□ -2.01
RPS4BP0CX36 ZIP1YDR285W 2628 nt2.48□□□□□ -2.01
RPS4BP0CX36 FKS3YMR306W 5358 nt2.48□□□□□ -2.01
RPS4BP0CX36 NOP14YDL148C 2433 nt2.48□□□□□ -2.01
RPS4BP0CX36 ISW1YBR245C 3390 nt2.47□□□□□ -2.01
RPS4BP0CX36 OST4YDL232W 111 nt2.47□□□□□ -2.01
RPS4BP0CX36 YNL211CYNL211C 261 nt2.47□□□□□ -2.01
RPS4BP0CX36 KTI11YBL071W-A 249 nt2.46□□□□□ -2.02
RPS4BP0CX36 MRD1YPR112C 2664 nt2.46□□□□□ -2.02
RPS4BP0CX36 EDS1YBR033W 2760 nt2.46□□□□□ -2.02
RPS4BP0CX36 ARP8YOR141C 2646 nt2.46□□□□□ -2.02
RPS4BP0CX36 APL2YKL135C 2181 nt2.46□□□□□ -2.02
RPS4BP0CX36 SLN1YIL147C 3663 nt2.45□□□□□ -2.02
RPS4BP0CX36 RPS30BYOR182C 192 nt2.45□□□□□ -2.02
RPS4BP0CX36 YBR206WYBR206W 324 nt2.45□□□□□ -2.02
RPS4BP0CX36 SBE22YHR103W 2559 nt2.45□□□□□ -2.02
RPS4BP0CX36 PDR3YBL005W 2931 nt2.45□□□□□ -2.02
RPS4BP0CX36 PTP2YOR208W 2253 nt2.44□□□□□ -2.02
RPS4BP0CX36 VPS13YLL040C 9435 nt2.44□□□□□ -2.02
RPS4BP0CX36 IFH1YLR223C 3258 nt2.44□□□□□ -2.02
RPS4BP0CX36 NEW1YPL226W 3591 nt2.44□□□□□ -2.02
RPS4BP0CX36 YDR239CYDR239C 2364 nt2.44□□□□□ -2.02
RPS4BP0CX36 AMS1YGL156W 3252 nt2.44□□□□□ -2.02
RPS4BP0CX36 DGR2YKL121W 2559 nt2.43□□□□□ -2.02
RPS4BP0CX36 CMC4YMR194C-B 222 nt2.43□□□□□ -2.02
RPS4BP0CX36 LCL1YPL056C 306 nt2.43□□□□□ -2.02
RPS4BP0CX36 FLO11YIR019C 4104 nt2.43□□□□□ -2.02
RPS4BP0CX36 TRS130YMR218C 3309 nt2.43□□□□□ -2.02
RPS4BP0CX36 ESC1YMR219W 4977 nt2.42□□□□□ -2.02
RPS4BP0CX36 DCP2YNL118C 2913 nt2.42□□□□□ -2.02
RPS4BP0CX36 YOR055WYOR055W 435 nt2.42□□□□□ -2.02
RPS4BP0CX36 PHO91YNR013C 2685 nt2.41□□□□□ -2.02
RPS4BP0CX36 YCR038W-AYCR038W-A 126 nt2.41□□□□□ -2.02
RPS4BP0CX36 YDR354C-AYDR354C-A 144 nt2.41□□□□□ -2.02
RPS4BP0CX36 TOP2YNL088W 4287 nt2.41□□□□□ -2.02
RPS4BP0CX36 YLR035C-AYLR035C-A 3468 nt2.4□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 60.3 ms