Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 NUP188YML103C 4968 nt1.43□□□□□ -2.18
VPS9P54787 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
VPS9P54787 YBR174CYBR174C 315 nt1.43□□□□□ -2.18
VPS9P54787 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
VPS9P54787 PIG1YLR273C 1947 nt1.42□□□□□ -2.18
VPS9P54787 WIP1YDR374W-A 270 nt1.42□□□□□ -2.18
VPS9P54787 YER076W-AYER076W-A 348 nt1.42□□□□□ -2.18
VPS9P54787 RTR1YER139C 681 nt1.42□□□□□ -2.18
VPS9P54787 YLR101CYLR101C 396 nt1.42□□□□□ -2.18
VPS9P54787 snR14snR14 160 nt1.42□□□□□ -2.18
VPS9P54787 SPC98YNL126W 2541 nt1.42□□□□□ -2.18
VPS9P54787 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
VPS9P54787 PET127YOR017W 2403 nt1.41□□□□□ -2.18
VPS9P54787 YDL211CYDL211C 1119 nt1.41□□□□□ -2.18
VPS9P54787 SWI6YLR182W 2412 nt1.41□□□□□ -2.18
VPS9P54787 SGO1YOR073W 1773 nt1.41□□□□□ -2.18
VPS9P54787 YDR114CYDR114C 303 nt1.4□□□□□ -2.19
VPS9P54787 YHL009W-AYHL009W-A 1242 nt1.4□□□□□ -2.19
VPS9P54787 YBL071CYBL071C 309 nt1.4□□□□□ -2.19
VPS9P54787 YPL182CYPL182C 384 nt1.4□□□□□ -2.19
VPS9P54787 YLR287CYLR287C 1068 nt1.39□□□□□ -2.19
VPS9P54787 YSY6YBR162W-A 198 nt1.39□□□□□ -2.19
VPS9P54787 AI5_ALPHAQ0070 1893 nt1.39□□□□□ -2.19
VPS9P54787 RRT15YLR162W-A 189 nt1.38□□□□□ -2.19
VPS9P54787 RPL9BYNL067W 576 nt1.38□□□□□ -2.19
VPS9P54787 NUT2YPR168W 474 nt1.38□□□□□ -2.19
VPS9P54787 MSN5YDR335W 3675 nt1.38□□□□□ -2.19
VPS9P54787 VPS54YDR027C 2670 nt1.37□□□□□ -2.19
VPS9P54787 YLL032CYLL032C 2478 nt1.37□□□□□ -2.19
VPS9P54787 YDR182W-AYDR182W-A 204 nt1.37□□□□□ -2.19
VPS9P54787 RTT102YGR275W 474 nt1.37□□□□□ -2.19
VPS9P54787 YLL020CYLL020C 306 nt1.37□□□□□ -2.19
VPS9P54787 ERP4YOR016C 624 nt1.37□□□□□ -2.19
VPS9P54787 YLL054CYLL054C 2532 nt1.37□□□□□ -2.19
VPS9P54787 RFX1YLR176C 2436 nt1.37□□□□□ -2.19
VPS9P54787 ENV11YGR071C 2583 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
VPS9P54787 YER006C-AYER006C-A 318 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
VPS9P54787 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
VPS9P54787 NUT1YGL151W 3399 nt1.36□□□□□ -2.19
VPS9P54787 TIM13YGR181W 318 nt1.36□□□□□ -2.19
VPS9P54787 DIE2YGR227W 1578 nt1.36□□□□□ -2.19
VPS9P54787 RSM22YKL155C 1887 nt1.36□□□□□ -2.19
VPS9P54787 UBC7YMR022W 498 nt1.36□□□□□ -2.19
VPS9P54787 YPR063CYPR063C 423 nt1.36□□□□□ -2.19
VPS9P54787 NOC3YLR002C 1992 nt1.36□□□□□ -2.19
VPS9P54787 CBS1YDL069C 690 nt1.35□□□□□ -2.19
VPS9P54787 YDR269CYDR269C 324 nt1.35□□□□□ -2.19
VPS9P54787 YIL059CYIL059C 366 nt1.35□□□□□ -2.19
VPS9P54787 RPS27AYKL156W 249 nt1.35□□□□□ -2.19
VPS9P54787 YMR141W-AYMR141W-A 225 nt1.35□□□□□ -2.19
VPS9P54787 YMR175W-AYMR175W-A 195 nt1.35□□□□□ -2.19
VPS9P54787 MAD1YGL086W 2250 nt1.35□□□□□ -2.19
VPS9P54787 CYC7YEL039C 342 nt1.34□□□□□ -2.19
VPS9P54787 MRPL31YKL138C 396 nt1.34□□□□□ -2.19
VPS9P54787 YLR456WYLR456W 615 nt1.33□□□□□ -2.2
VPS9P54787 HCH1YNL281W 462 nt1.33□□□□□ -2.2
VPS9P54787 FYV8YGR196C 2454 nt1.33□□□□□ -2.2
VPS9P54787 SPT21YMR179W 2277 nt1.32□□□□□ -2.2
VPS9P54787 CDC39YCR093W 6327 nt1.32□□□□□ -2.2
VPS9P54787 RVS161YCR009C 798 nt1.32□□□□□ -2.2
VPS9P54787 YDL011CYDL011C 324 nt1.32□□□□□ -2.2
VPS9P54787 CDC36YDL165W 576 nt1.32□□□□□ -2.2
VPS9P54787 SDH2YLL041C 801 nt1.32□□□□□ -2.2
VPS9P54787 YOR161W-BYOR161W-B 261 nt1.32□□□□□ -2.2
VPS9P54787 SWI4YER111C 3282 nt1.32□□□□□ -2.2
VPS9P54787 EFR3YMR212C 2349 nt1.32□□□□□ -2.2
VPS9P54787 SAS3YBL052C 2496 nt1.31□□□□□ -2.2
VPS9P54787 APL2YKL135C 2181 nt1.31□□□□□ -2.2
VPS9P54787 Q0017Q0017 162 nt1.31□□□□□ -2.2
VPS9P54787 PIP2YOR363C 2991 nt1.3□□□□□ -2.2
VPS9P54787 YJL020W-AYJL020W-A 258 nt1.3□□□□□ -2.2
VPS9P54787 SCW11YGL028C 1629 nt1.29□□□□□ -2.2
VPS9P54787 YLR422WYLR422W 5799 nt1.29□□□□□ -2.2
VPS9P54787 MUK1YPL070W 1839 nt1.29□□□□□ -2.2
VPS9P54787 APL3YBL037W 3078 nt1.29□□□□□ -2.2
VPS9P54787 UPS1YLR193C 528 nt1.28□□□□□ -2.2
VPS9P54787 YLR202CYLR202C 327 nt1.28□□□□□ -2.2
VPS9P54787 SLY1YDR189W 2001 nt1.28□□□□□ -2.2
VPS9P54787 YGR130CYGR130C 2451 nt1.28□□□□□ -2.2
VPS9P54787 MPT5YGL178W 2580 nt1.28□□□□□ -2.2
VPS9P54787 IML1YJR138W 4755 nt1.27□□□□□ -2.21
VPS9P54787 EAF1YDR359C 2949 nt1.27□□□□□ -2.21
VPS9P54787 YNL284C-BYNL284C-B 5268 nt1.27□□□□□ -2.21
VPS9P54787 RAD9YDR217C 3930 nt1.27□□□□□ -2.21
VPS9P54787 STB6YKL072W 2301 nt1.27□□□□□ -2.21
VPS9P54787 PBY1YBR094W 2262 nt1.27□□□□□ -2.21
VPS9P54787 AHC1YOR023C 1701 nt1.26□□□□□ -2.21
VPS9P54787 SPO75YLL005C 2607 nt1.26□□□□□ -2.21
VPS9P54787 SDH7YDR511W 402 nt1.26□□□□□ -2.21
VPS9P54787 MRPL50YNR022C 420 nt1.26□□□□□ -2.21
VPS9P54787 RPL33BYOR234C 324 nt1.26□□□□□ -2.21
VPS9P54787 AIM9YER080W 1884 nt1.25□□□□□ -2.21
VPS9P54787 YJL007CYJL007C 315 nt1.25□□□□□ -2.21
VPS9P54787 YCS4YLR272C 3531 nt1.25□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 29.1 ms