Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 YDL025W-AYDL025W-A 105 nt2.63□□□□□ -1.99
DEF1P35732 YOR161W-BYOR161W-B 261 nt2.63□□□□□ -1.99
DEF1P35732 SGF11YPL047W 300 nt2.63□□□□□ -1.99
DEF1P35732 AXL1YPR122W 3627 nt2.63□□□□□ -1.99
DEF1P35732 YNL018CYNL018C 1839 nt2.63□□□□□ -1.99
DEF1P35732 RRP12YPL012W 3687 nt2.63□□□□□ -1.99
DEF1P35732 GRX8YLR364W 330 nt2.62□□□□□ -1.99
DEF1P35732 YOL098CYOL098C 3114 nt2.62□□□□□ -1.99
DEF1P35732 USO1YDL058W 5373 nt2.62□□□□□ -1.99
DEF1P35732 tW(CCA)G1tW(CCA)G1 72 nt2.61□□□□□ -1.99
DEF1P35732 tW(CCA)G2tW(CCA)G2 72 nt2.61□□□□□ -1.99
DEF1P35732 tW(CCA)JtW(CCA)J 72 nt2.61□□□□□ -1.99
DEF1P35732 tW(CCA)KtW(CCA)K 72 nt2.61□□□□□ -1.99
DEF1P35732 tW(CCA)MtW(CCA)M 72 nt2.61□□□□□ -1.99
DEF1P35732 tW(CCA)PtW(CCA)P 72 nt2.61□□□□□ -1.99
DEF1P35732 VPH1YOR270C 2523 nt2.6□□□□□ -1.99
DEF1P35732 PMP1YCR024C-A 123 nt2.6□□□□□ -1.99
DEF1P35732 YPL150WYPL150W 2706 nt2.6□□□□□ -1.99
DEF1P35732 YPR097WYPR097W 3222 nt2.59□□□□□ -1.99
DEF1P35732 snR70snR70 164 nt2.59□□□□□ -1.99
DEF1P35732 BAS1YKR099W 2436 nt2.59□□□□□ -2
DEF1P35732 BCK1YJL095W 4437 nt2.58□□□□□ -2
DEF1P35732 NOP14YDL148C 2433 nt2.58□□□□□ -2
DEF1P35732 SNU13YEL026W 381 nt2.58□□□□□ -2
DEF1P35732 NAB3YPL190C 2409 nt2.58□□□□□ -2
DEF1P35732 NPR3YHL023C 3441 nt2.58□□□□□ -2
DEF1P35732 YLR149CYLR149C 2193 nt2.57□□□□□ -2
DEF1P35732 YEL073CYEL073C 324 nt2.57□□□□□ -2
DEF1P35732 YHR210CYHR210C 1026 nt2.57□□□□□ -2
DEF1P35732 YBR184WYBR184W 1572 nt2.57□□□□□ -2
DEF1P35732 VPS34YLR240W 2628 nt2.56□□□□□ -2
DEF1P35732 INP2YMR163C 2118 nt2.56□□□□□ -2
DEF1P35732 ECM12YHR021W-A 456 nt2.56□□□□□ -2
DEF1P35732 YHR071C-AYHR071C-A 321 nt2.56□□□□□ -2
DEF1P35732 YIL071W-AYIL071W-A 477 nt2.56□□□□□ -2
DEF1P35732 YOR345CYOR345C 351 nt2.56□□□□□ -2
DEF1P35732 YEL043WYEL043W 2871 nt2.56□□□□□ -2
DEF1P35732 FKS3YMR306W 5358 nt2.56□□□□□ -2
DEF1P35732 SVL3YPL032C 2478 nt2.56□□□□□ -2
DEF1P35732 MPT5YGL178W 2580 nt2.55□□□□□ -2
DEF1P35732 VPS13YLL040C 9435 nt2.55□□□□□ -2
DEF1P35732 YGR050CYGR050C 357 nt2.55□□□□□ -2
DEF1P35732 VPS35YJL154C 2835 nt2.55□□□□□ -2
DEF1P35732 GRR1YJR090C 3456 nt2.55□□□□□ -2
DEF1P35732 YOR218CYOR218C 420 nt2.55□□□□□ -2
DEF1P35732 UBP11YKR098C 2154 nt2.54□□□□□ -2
DEF1P35732 CLN3YAL040C 1743 nt2.54□□□□□ -2
DEF1P35732 TFB5YDR079C-A 219 nt2.54□□□□□ -2
DEF1P35732 RGM1YMR182C 636 nt2.54□□□□□ -2
DEF1P35732 IRC8YJL051W 2469 nt2.54□□□□□ -2
DEF1P35732 PTC5YOR090C 1719 nt2.54□□□□□ -2
DEF1P35732 YDR003W-AYDR003W-A 123 nt2.53□□□□□ -2
DEF1P35732 YDR544CYDR544C 429 nt2.53□□□□□ -2
DEF1P35732 RPL33BYOR234C 324 nt2.53□□□□□ -2
DEF1P35732 SGS1YMR190C 4344 nt2.53□□□□□ -2
DEF1P35732 YPP1YGR198W 2454 nt2.52□□□□□ -2.01
DEF1P35732 YPL216WYPL216W 3309 nt2.52□□□□□ -2.01
DEF1P35732 POM152YMR129W 4014 nt2.52□□□□□ -2.01
DEF1P35732 PXA2YKL188C 2562 nt2.52□□□□□ -2.01
DEF1P35732 SEF1YBL066C 3447 nt2.52□□□□□ -2.01
DEF1P35732 YMR326CYMR326C 309 nt2.52□□□□□ -2.01
DEF1P35732 YCL001W-BYCL001W-B 255 nt2.52□□□□□ -2.01
DEF1P35732 RAV1YJR033C 4074 nt2.51□□□□□ -2.01
DEF1P35732 snR72snR72 98 nt2.51□□□□□ -2.01
DEF1P35732 snR76snR76 109 nt2.51□□□□□ -2.01
DEF1P35732 RPB10YOR210W 213 nt2.51□□□□□ -2.01
DEF1P35732 TFC8YPL007C 1767 nt2.51□□□□□ -2.01
DEF1P35732 ARP8YOR141C 2646 nt2.51□□□□□ -2.01
DEF1P35732 MCM10YIL150C 1716 nt2.51□□□□□ -2.01
DEF1P35732 NUP100YKL068W 2880 nt2.5□□□□□ -2.01
DEF1P35732 YHR032W-AYHR032W-A 180 nt2.5□□□□□ -2.01
DEF1P35732 YIR044CYIR044C 186 nt2.5□□□□□ -2.01
DEF1P35732 YLR146W-AYLR146W-A 189 nt2.5□□□□□ -2.01
DEF1P35732 SNF5YBR289W 2718 nt2.5□□□□□ -2.01
DEF1P35732 SCP160YJL080C 3669 nt2.49□□□□□ -2.01
DEF1P35732 SPP41YDR464W 4308 nt2.49□□□□□ -2.01
DEF1P35732 DNA2YHR164C 4569 nt2.48□□□□□ -2.01
DEF1P35732 NUP120YKL057C 3114 nt2.48□□□□□ -2.01
DEF1P35732 NOP10YHR072W-A 177 nt2.48□□□□□ -2.01
DEF1P35732 YLR154W-AYLR154W-A 186 nt2.48□□□□□ -2.01
DEF1P35732 BUB1YGR188C 3066 nt2.48□□□□□ -2.01
DEF1P35732 YMR045CYMR045C 5268 nt2.48□□□□□ -2.01
DEF1P35732 YPR089WYPR089W 2667 nt2.47□□□□□ -2.01
DEF1P35732 NAB6YML117W 3405 nt2.47□□□□□ -2.01
DEF1P35732 SEC26YDR238C 2922 nt2.47□□□□□ -2.01
DEF1P35732 YOR072W-BYOR072W-B 162 nt2.47□□□□□ -2.01
DEF1P35732 SAP185YJL098W 3177 nt2.47□□□□□ -2.01
DEF1P35732 SPO21YOL091W 1830 nt2.47□□□□□ -2.01
DEF1P35732 SMY1YKL079W 1971 nt2.47□□□□□ -2.01
DEF1P35732 RPO41YFL036W 4056 nt2.47□□□□□ -2.01
DEF1P35732 PHO91YNR013C 2685 nt2.46□□□□□ -2.01
DEF1P35732 COY1YKL179C 2040 nt2.46□□□□□ -2.02
DEF1P35732 HOS4YIL112W 3252 nt2.46□□□□□ -2.02
DEF1P35732 YDL247W-AYDL247W-A 75 nt2.46□□□□□ -2.02
DEF1P35732 RPL42BYHR141C 321 nt2.46□□□□□ -2.02
DEF1P35732 PAU8YAL068C 363 nt2.46□□□□□ -2.02
DEF1P35732 RPL42AYNL162W 321 nt2.46□□□□□ -2.02
DEF1P35732 PAU20YOL161C 363 nt2.46□□□□□ -2.02
DEF1P35732 snR43snR43 209 nt2.46□□□□□ -2.02
DEF1P35732 DNF1YER166W 4716 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 10 ms