Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A2P08123 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.24■■□□□ 1.15
COL1A2P08123 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.24■■□□□ 1.15
COL1A2P08123 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.23■■□□□ 1.15
COL1A2P08123 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL1A2P08123 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.23■■□□□ 1.15
COL1A2P08123 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
COL1A2P08123 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.23■■□□□ 1.15
COL1A2P08123 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
COL1A2P08123 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL1A2P08123 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.23■■□□□ 1.15
COL1A2P08123 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A2P08123 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A2P08123 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A2P08123 FP700111.2-201ENST00000619190 1892 ntBASIC22.22■■□□□ 1.15
COL1A2P08123 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A2P08123 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A2P08123 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.22■■□□□ 1.15
COL1A2P08123 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.22■■□□□ 1.15
COL1A2P08123 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.22■■□□□ 1.15
COL1A2P08123 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
COL1A2P08123 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A2P08123 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL1A2P08123 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A2P08123 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COL1A2P08123 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.22■■□□□ 1.15
COL1A2P08123 MIR4497-201ENST00000583208 89 ntBASIC22.22■■□□□ 1.15
COL1A2P08123 AC233702.5-201ENST00000584107 538 ntBASIC22.22■■□□□ 1.15
COL1A2P08123 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.21■■□□□ 1.15
COL1A2P08123 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.21■■□□□ 1.15
COL1A2P08123 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.21■■□□□ 1.15
COL1A2P08123 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
COL1A2P08123 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
COL1A2P08123 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.21■■□□□ 1.15
COL1A2P08123 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.21■■□□□ 1.15
COL1A2P08123 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.21■■□□□ 1.15
COL1A2P08123 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.21■■□□□ 1.15
COL1A2P08123 AC124283.5-201ENST00000624661 1809 ntBASIC22.21■■□□□ 1.15
COL1A2P08123 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.21■■□□□ 1.15
COL1A2P08123 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL1A2P08123 AL135905.2-201ENST00000584934 1404 ntBASIC22.2■■□□□ 1.14
COL1A2P08123 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A2P08123 AC007225.1-201ENST00000566331 1836 ntBASIC22.2■■□□□ 1.14
COL1A2P08123 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.2■■□□□ 1.14
COL1A2P08123 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A2P08123 RPS2P55-201ENST00000397318 883 ntBASIC22.2■■□□□ 1.14
COL1A2P08123 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A2P08123 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A2P08123 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.2■■□□□ 1.14
COL1A2P08123 AC107956.1-201ENST00000494359 873 ntBASIC22.2■■□□□ 1.14
COL1A2P08123 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.2■■□□□ 1.14
COL1A2P08123 RARRES2P10-201ENST00000564312 460 ntBASIC22.2■■□□□ 1.14
COL1A2P08123 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.2■■□□□ 1.14
COL1A2P08123 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.2■■□□□ 1.14
COL1A2P08123 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A2P08123 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.2■■□□□ 1.14
COL1A2P08123 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL1A2P08123 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.2■■□□□ 1.14
COL1A2P08123 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL1A2P08123 KRT8P17-201ENST00000453110 1448 ntBASIC22.19■■□□□ 1.14
COL1A2P08123 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.19■■□□□ 1.14
COL1A2P08123 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.19■■□□□ 1.14
COL1A2P08123 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL1A2P08123 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.19■■□□□ 1.14
COL1A2P08123 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.19■■□□□ 1.14
COL1A2P08123 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.19■■□□□ 1.14
COL1A2P08123 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.19■■□□□ 1.14
COL1A2P08123 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
COL1A2P08123 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.19■■□□□ 1.14
COL1A2P08123 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL1A2P08123 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.18■■□□□ 1.14
COL1A2P08123 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.18■■□□□ 1.14
COL1A2P08123 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL1A2P08123 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL1A2P08123 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms