Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph3bQ9DA80 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Gm18959-201ENSMUST00000208954 655 ntBASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph3bQ9DA80 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rsph3bQ9DA80 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rsph3bQ9DA80 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rsph3bQ9DA80 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Fst-202ENSMUST00000223640 2612 ntBASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rsph3bQ9DA80 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms