Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM43Q96BQ3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 WWOX-216ENST00000569818 525 ntBASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM43Q96BQ3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 AP002982.1-201ENST00000492365 877 ntBASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM43Q96BQ3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 AC116562.2-201ENST00000507042 360 ntBASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRIM43Q96BQ3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
TRIM43Q96BQ3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 AC010203.1-204ENST00000548782 407 ntBASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 AC127496.7-201ENST00000625110 1798 ntBASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRIM43Q96BQ3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRIM43Q96BQ3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.18■■□□□ 1.14
TRIM43Q96BQ3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms