Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Rbm28Q8CGC6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rbm28Q8CGC6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Rbm28Q8CGC6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rbm28Q8CGC6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rbm28Q8CGC6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Rbm28Q8CGC6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.8■■■□□ 2.2
Rbm28Q8CGC6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Rbm28Q8CGC6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rbm28Q8CGC6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.79■■■□□ 2.2
Rbm28Q8CGC6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rbm28Q8CGC6 Zxda-201ENSMUST00000117281 2621 ntBASIC28.79■■■□□ 2.2
Rbm28Q8CGC6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rbm28Q8CGC6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rbm28Q8CGC6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.78■■■□□ 2.2
Rbm28Q8CGC6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
Rbm28Q8CGC6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rbm28Q8CGC6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rbm28Q8CGC6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.76■■■□□ 2.19
Rbm28Q8CGC6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.76■■■□□ 2.19
Rbm28Q8CGC6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rbm28Q8CGC6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rbm28Q8CGC6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rbm28Q8CGC6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rbm28Q8CGC6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rbm28Q8CGC6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Rbm28Q8CGC6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rbm28Q8CGC6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.68■■■□□ 2.18
Rbm28Q8CGC6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Rbm28Q8CGC6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rbm28Q8CGC6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rbm28Q8CGC6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Rbm28Q8CGC6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Rbm28Q8CGC6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Rbm28Q8CGC6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rbm28Q8CGC6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rbm28Q8CGC6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rbm28Q8CGC6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.61■■■□□ 2.17
Rbm28Q8CGC6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.61■■■□□ 2.17
Rbm28Q8CGC6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
Rbm28Q8CGC6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rbm28Q8CGC6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rbm28Q8CGC6 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.59■■■□□ 2.17
Rbm28Q8CGC6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rbm28Q8CGC6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Rbm28Q8CGC6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.57■■■□□ 2.16
Rbm28Q8CGC6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rbm28Q8CGC6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rbm28Q8CGC6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Rbm28Q8CGC6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Rbm28Q8CGC6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rbm28Q8CGC6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rbm28Q8CGC6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rbm28Q8CGC6 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.54■■■□□ 2.16
Rbm28Q8CGC6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Rbm28Q8CGC6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Rbm28Q8CGC6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.53■■■□□ 2.16
Rbm28Q8CGC6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rbm28Q8CGC6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Rbm28Q8CGC6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Rbm28Q8CGC6 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.51■■■□□ 2.15
Rbm28Q8CGC6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.51■■■□□ 2.15
Rbm28Q8CGC6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.51■■■□□ 2.15
Rbm28Q8CGC6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rbm28Q8CGC6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rbm28Q8CGC6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.5■■■□□ 2.15
Rbm28Q8CGC6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rbm28Q8CGC6 Gm7432-201ENSMUST00000210343 879 ntBASIC28.49■■■□□ 2.15
Rbm28Q8CGC6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rbm28Q8CGC6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Rbm28Q8CGC6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.47■■■□□ 2.15
Rbm28Q8CGC6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rbm28Q8CGC6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Rbm28Q8CGC6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.46■■■□□ 2.15
Rbm28Q8CGC6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rbm28Q8CGC6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.45■■■□□ 2.14
Rbm28Q8CGC6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rbm28Q8CGC6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rbm28Q8CGC6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rbm28Q8CGC6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.44■■■□□ 2.14
Rbm28Q8CGC6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Rbm28Q8CGC6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Rbm28Q8CGC6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rbm28Q8CGC6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rbm28Q8CGC6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rbm28Q8CGC6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.4■■■□□ 2.14
Rbm28Q8CGC6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.39■■■□□ 2.14
Rbm28Q8CGC6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.39■■■□□ 2.13
Rbm28Q8CGC6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rbm28Q8CGC6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Rbm28Q8CGC6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.37■■■□□ 2.13
Rbm28Q8CGC6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rbm28Q8CGC6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rbm28Q8CGC6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Rbm28Q8CGC6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Rbm28Q8CGC6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.34■■■□□ 2.13
Rbm28Q8CGC6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rbm28Q8CGC6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.33■■■□□ 2.13
Rbm28Q8CGC6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Rbm28Q8CGC6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.33■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms