Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rab43Q8CG50 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rab43Q8CG50 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rab43Q8CG50 Gm11599-201ENSMUST00000118720 878 ntBASIC24■■□□□ 1.43
Rab43Q8CG50 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Rab43Q8CG50 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.99■■□□□ 1.43
Rab43Q8CG50 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Rab43Q8CG50 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Rab43Q8CG50 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab43Q8CG50 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.98■■□□□ 1.43
Rab43Q8CG50 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rab43Q8CG50 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.98■■□□□ 1.43
Rab43Q8CG50 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab43Q8CG50 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rab43Q8CG50 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.96■■□□□ 1.43
Rab43Q8CG50 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rab43Q8CG50 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.95■■□□□ 1.42
Rab43Q8CG50 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rab43Q8CG50 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rab43Q8CG50 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rab43Q8CG50 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.94■■□□□ 1.42
Rab43Q8CG50 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
Rab43Q8CG50 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rab43Q8CG50 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.93■■□□□ 1.42
Rab43Q8CG50 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.92■■□□□ 1.42
Rab43Q8CG50 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rab43Q8CG50 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.91■■□□□ 1.42
Rab43Q8CG50 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.9■■□□□ 1.42
Rab43Q8CG50 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rab43Q8CG50 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.42
Rab43Q8CG50 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rab43Q8CG50 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rab43Q8CG50 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rab43Q8CG50 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rab43Q8CG50 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rab43Q8CG50 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
Rab43Q8CG50 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rab43Q8CG50 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rab43Q8CG50 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rab43Q8CG50 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rab43Q8CG50 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rab43Q8CG50 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rab43Q8CG50 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rab43Q8CG50 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rab43Q8CG50 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rab43Q8CG50 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.81■■□□□ 1.4
Rab43Q8CG50 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Rab43Q8CG50 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rab43Q8CG50 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab43Q8CG50 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rab43Q8CG50 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Rab43Q8CG50 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab43Q8CG50 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.78■■□□□ 1.4
Rab43Q8CG50 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.78■■□□□ 1.4
Rab43Q8CG50 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.78■■□□□ 1.4
Rab43Q8CG50 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.78■■□□□ 1.4
Rab43Q8CG50 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Rab43Q8CG50 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.76■■□□□ 1.39
Rab43Q8CG50 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rab43Q8CG50 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rab43Q8CG50 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rab43Q8CG50 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.75■■□□□ 1.39
Rab43Q8CG50 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.75■■□□□ 1.39
Rab43Q8CG50 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rab43Q8CG50 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.74■■□□□ 1.39
Rab43Q8CG50 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rab43Q8CG50 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Rab43Q8CG50 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rab43Q8CG50 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.72■■□□□ 1.39
Rab43Q8CG50 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rab43Q8CG50 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rab43Q8CG50 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.71■■□□□ 1.39
Rab43Q8CG50 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rab43Q8CG50 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rab43Q8CG50 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rab43Q8CG50 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rab43Q8CG50 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rab43Q8CG50 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rab43Q8CG50 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.68■■□□□ 1.38
Rab43Q8CG50 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rab43Q8CG50 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rab43Q8CG50 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rab43Q8CG50 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rab43Q8CG50 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rab43Q8CG50 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rab43Q8CG50 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rab43Q8CG50 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab43Q8CG50 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab43Q8CG50 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Rab43Q8CG50 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rab43Q8CG50 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rab43Q8CG50 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.62■■□□□ 1.37
Rab43Q8CG50 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Rab43Q8CG50 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rab43Q8CG50 Gm30023-201ENSMUST00000197970 889 ntBASIC23.61■■□□□ 1.37
Rab43Q8CG50 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.61■■□□□ 1.37
Rab43Q8CG50 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rab43Q8CG50 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab43Q8CG50 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.59■■□□□ 1.37
Rab43Q8CG50 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms