Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ybx1P62960 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.34■■□□□ 1.65
Ybx1P62960 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ybx1P62960 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ybx1P62960 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ybx1P62960 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.32■■□□□ 1.64
Ybx1P62960 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Ybx1P62960 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ybx1P62960 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ybx1P62960 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ybx1P62960 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ybx1P62960 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ybx1P62960 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.28■■□□□ 1.64
Ybx1P62960 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ybx1P62960 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.27■■□□□ 1.64
Ybx1P62960 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Ybx1P62960 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ybx1P62960 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.26■■□□□ 1.63
Ybx1P62960 Gm11599-201ENSMUST00000118720 878 ntBASIC25.25■■□□□ 1.63
Ybx1P62960 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ybx1P62960 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.25■■□□□ 1.63
Ybx1P62960 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ybx1P62960 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ybx1P62960 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ybx1P62960 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ybx1P62960 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.21■■□□□ 1.63
Ybx1P62960 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ybx1P62960 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ybx1P62960 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ybx1P62960 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ybx1P62960 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.18■■□□□ 1.62
Ybx1P62960 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.18■■□□□ 1.62
Ybx1P62960 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ybx1P62960 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ybx1P62960 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ybx1P62960 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ybx1P62960 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ybx1P62960 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ybx1P62960 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.15■■□□□ 1.62
Ybx1P62960 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ybx1P62960 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ybx1P62960 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.13■■□□□ 1.61
Ybx1P62960 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ybx1P62960 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
Ybx1P62960 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ybx1P62960 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.11■■□□□ 1.61
Ybx1P62960 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ybx1P62960 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ybx1P62960 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ybx1P62960 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ybx1P62960 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ybx1P62960 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
Ybx1P62960 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ybx1P62960 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Ybx1P62960 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ybx1P62960 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.08■■□□□ 1.61
Ybx1P62960 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Ybx1P62960 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ybx1P62960 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ybx1P62960 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Ybx1P62960 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ybx1P62960 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
Ybx1P62960 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ybx1P62960 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Ybx1P62960 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ybx1P62960 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ybx1P62960 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.05■■□□□ 1.6
Ybx1P62960 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.05■■□□□ 1.6
Ybx1P62960 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ybx1P62960 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.04■■□□□ 1.6
Ybx1P62960 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ybx1P62960 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ybx1P62960 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Ybx1P62960 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ybx1P62960 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ybx1P62960 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ybx1P62960 Gm11175-201ENSMUST00000116172 543 ntBASIC25.03■■□□□ 1.6
Ybx1P62960 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.03■■□□□ 1.6
Ybx1P62960 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.02■■□□□ 1.6
Ybx1P62960 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ybx1P62960 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ybx1P62960 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ybx1P62960 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Ybx1P62960 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Ybx1P62960 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Ybx1P62960 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Ybx1P62960 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ybx1P62960 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.96■■□□□ 1.59
Ybx1P62960 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Ybx1P62960 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.96■■□□□ 1.59
Ybx1P62960 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ybx1P62960 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ybx1P62960 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.93■■□□□ 1.58
Ybx1P62960 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ybx1P62960 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ybx1P62960 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ybx1P62960 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ybx1P62960 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.89■■□□□ 1.58
Ybx1P62960 Gm30023-201ENSMUST00000197970 889 ntBASIC24.89■■□□□ 1.58
Ybx1P62960 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.89■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms