Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 ACO2YJL200C 2370 nt11.69□□□□□ -0.54
RCM1P53972 QDR2YIL121W 1629 nt11.68□□□□□ -0.54
RCM1P53972 ADE8YDR408C 645 nt11.66□□□□□ -0.54
RCM1P53972 FLX1YIL134W 936 nt11.66□□□□□ -0.54
RCM1P53972 ABZ2YMR289W 1125 nt11.66□□□□□ -0.54
RCM1P53972 ERG13YML126C 1476 nt11.63□□□□□ -0.55
RCM1P53972 THP3YPR045C 1413 nt11.63□□□□□ -0.55
RCM1P53972 TVP23YDR084C 600 nt11.62□□□□□ -0.55
RCM1P53972 CWC15YDR163W 528 nt11.62□□□□□ -0.55
RCM1P53972 SPE2YOL052C 1191 nt11.62□□□□□ -0.55
RCM1P53972 RDN37-1RDN37-1 5354 nt11.61□□□□□ -0.55
RCM1P53972 RDN37-2RDN37-2 5354 nt11.61□□□□□ -0.55
RCM1P53972 PHB2YGR231C 933 nt11.61□□□□□ -0.55
RCM1P53972 BUD20YLR074C 501 nt11.61□□□□□ -0.55
RCM1P53972 ADH3YMR083W 1128 nt11.61□□□□□ -0.55
RCM1P53972 ALG12YNR030W 1656 nt11.6□□□□□ -0.55
RCM1P53972 ASP3-1YLR155C 1089 nt11.59□□□□□ -0.55
RCM1P53972 ASP3-2YLR157C 1089 nt11.59□□□□□ -0.55
RCM1P53972 ASP3-3YLR158C 1089 nt11.59□□□□□ -0.55
RCM1P53972 ASP3-4YLR160C 1089 nt11.59□□□□□ -0.55
RCM1P53972 PBP1YGR178C 2169 nt11.59□□□□□ -0.55
RCM1P53972 OPI3YJR073C 621 nt11.58□□□□□ -0.56
RCM1P53972 RDN25-1RDN25-1 3396 nt11.55□□□□□ -0.56
RCM1P53972 RDN25-2RDN25-2 3396 nt11.55□□□□□ -0.56
RCM1P53972 SER2YGR208W 930 nt11.52□□□□□ -0.57
RCM1P53972 MCH5YOR306C 1566 nt11.51□□□□□ -0.57
RCM1P53972 VPS62YGR141W 1404 nt11.51□□□□□ -0.57
RCM1P53972 MOB1YIL106W 945 nt11.5□□□□□ -0.57
RCM1P53972 YMR007WYMR007W 381 nt11.5□□□□□ -0.57
RCM1P53972 FSH2YMR222C 672 nt11.5□□□□□ -0.57
RCM1P53972 SAC7YDR389W 1965 nt11.49□□□□□ -0.57
RCM1P53972 TPC1YGR096W 945 nt11.49□□□□□ -0.57
RCM1P53972 ENO2YHR174W 1314 nt11.45□□□□□ -0.58
RCM1P53972 CYC3YAL039C 810 nt11.44□□□□□ -0.58
RCM1P53972 AIM1YAL046C 357 nt11.44□□□□□ -0.58
RCM1P53972 BET2YPR176C 978 nt11.44□□□□□ -0.58
RCM1P53972 AMF1YOR378W 1548 nt11.42□□□□□ -0.58
RCM1P53972 YDL086WYDL086W 822 nt11.42□□□□□ -0.58
RCM1P53972 TGA1tA(UGC)A 73 nt11.42□□□□□ -0.58
RCM1P53972 tA(UGC)EtA(UGC)E 73 nt11.42□□□□□ -0.58
RCM1P53972 tA(UGC)GtA(UGC)G 73 nt11.42□□□□□ -0.58
RCM1P53972 tA(UGC)LtA(UGC)L 73 nt11.42□□□□□ -0.58
RCM1P53972 tA(UGC)OtA(UGC)O 73 nt11.42□□□□□ -0.58
RCM1P53972 CYT2YKL087C 675 nt11.42□□□□□ -0.58
RCM1P53972 PAU21YOR394W 495 nt11.42□□□□□ -0.58
RCM1P53972 PAU22YPL282C 495 nt11.42□□□□□ -0.58
RCM1P53972 HTS1YPR033C 1641 nt11.42□□□□□ -0.58
RCM1P53972 YKR012CYKR012C 378 nt11.41□□□□□ -0.58
RCM1P53972 DIG1YPL049C 1359 nt11.41□□□□□ -0.58
RCM1P53972 YOR343CYOR343C 327 nt11.4□□□□□ -0.58
RCM1P53972 PCP1YGR101W 1041 nt11.39□□□□□ -0.59
RCM1P53972 RCR1YBR005W 642 nt11.39□□□□□ -0.59
RCM1P53972 YNR064CYNR064C 873 nt11.35□□□□□ -0.59
RCM1P53972 NAR1YNL240C 1476 nt11.35□□□□□ -0.59
RCM1P53972 NAM8YHR086W 1572 nt11.34□□□□□ -0.59
RCM1P53972 SDS24YBR214W 1584 nt11.34□□□□□ -0.59
RCM1P53972 YGR210CYGR210C 1236 nt11.34□□□□□ -0.59
RCM1P53972 LSB6YJL100W 1824 nt11.34□□□□□ -0.59
RCM1P53972 YAT1YAR035W 2064 nt11.34□□□□□ -0.59
RCM1P53972 FCY1YPR062W 477 nt11.33□□□□□ -0.6
RCM1P53972 LEU2YCL018W 1095 nt11.33□□□□□ -0.6
RCM1P53972 YIL100C-AYIL100C-A 339 nt11.32□□□□□ -0.6
RCM1P53972 ERO1YML130C 1692 nt11.31□□□□□ -0.6
RCM1P53972 RPL12BYDR418W 498 nt11.31□□□□□ -0.6
RCM1P53972 SRP102YKL154W 735 nt11.31□□□□□ -0.6
RCM1P53972 GRH1YDR517W 1119 nt11.3□□□□□ -0.6
RCM1P53972 YAL016C-AYAL016C-A 315 nt11.29□□□□□ -0.6
RCM1P53972 YOR325WYOR325W 474 nt11.29□□□□□ -0.6
RCM1P53972 VBA3YCL069W 1377 nt11.28□□□□□ -0.6
RCM1P53972 HRA1HRA1 564 nt11.28□□□□□ -0.6
RCM1P53972 YLR280CYLR280C 351 nt11.28□□□□□ -0.6
RCM1P53972 SFL1YOR140W 2301 nt11.27□□□□□ -0.6
RCM1P53972 ELO1YJL196C 933 nt11.27□□□□□ -0.61
RCM1P53972 ENT4YLL038C 744 nt11.27□□□□□ -0.61
RCM1P53972 CCT2YIL142W 1584 nt11.27□□□□□ -0.61
RCM1P53972 YGR139WYGR139W 339 nt11.26□□□□□ -0.61
RCM1P53972 SWT21YNL187W 1074 nt11.26□□□□□ -0.61
RCM1P53972 ENO1YGR254W 1314 nt11.26□□□□□ -0.61
RCM1P53972 EMC3YKL207W 762 nt11.24□□□□□ -0.61
RCM1P53972 RPC82YPR190C 1965 nt11.23□□□□□ -0.61
RCM1P53972 YJL160CYJL160C 864 nt11.23□□□□□ -0.61
RCM1P53972 YLR046CYLR046C 813 nt11.22□□□□□ -0.61
RCM1P53972 YPL108WYPL108W 507 nt11.22□□□□□ -0.61
RCM1P53972 INA1YLR413W 2028 nt11.21□□□□□ -0.61
RCM1P53972 KEL3YPL263C 1956 nt11.2□□□□□ -0.62
RCM1P53972 REX2YLR059C 810 nt11.2□□□□□ -0.62
RCM1P53972 MET1YKR069W 1782 nt11.19□□□□□ -0.62
RCM1P53972 ITR2YOL103W 1830 nt11.19□□□□□ -0.62
RCM1P53972 OPI10YOL032W 741 nt11.18□□□□□ -0.62
RCM1P53972 YKL053WYKL053W 375 nt11.17□□□□□ -0.62
RCM1P53972 YOR268CYOR268C 399 nt11.17□□□□□ -0.62
RCM1P53972 SUV3YPL029W 2214 nt11.16□□□□□ -0.62
RCM1P53972 ILV3YJR016C 1758 nt11.16□□□□□ -0.62
RCM1P53972 YMR210WYMR210W 1350 nt11.16□□□□□ -0.62
RCM1P53972 SRP54YPR088C 1626 nt11.11□□□□□ -0.63
RCM1P53972 MRP1YDR347W 966 nt11.11□□□□□ -0.63
RCM1P53972 MFG1YDL233W 1377 nt11.11□□□□□ -0.63
RCM1P53972 DLD3YEL071W 1491 nt11.11□□□□□ -0.63
RCM1P53972 KAE1YKR038C 1161 nt11.1□□□□□ -0.63
RCM1P53972 PET18YCR020C 648 nt11.09□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 60.5 ms