Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 NPP1YCR026C 2229 nt8.72□□□□□ -1.01
USE1P53146 PCP1YGR101W 1041 nt8.7□□□□□ -1.02
USE1P53146 KRR1YCL059C 951 nt8.69□□□□□ -1.02
USE1P53146 ELO1YJL196C 933 nt8.69□□□□□ -1.02
USE1P53146 YLR437C-AYLR437C-A 228 nt8.69□□□□□ -1.02
USE1P53146 HXT12YIL170W 1374 nt8.69□□□□□ -1.02
USE1P53146 GAL3YDR009W 1563 nt8.69□□□□□ -1.02
USE1P53146 VRG4YGL225W 1014 nt8.68□□□□□ -1.02
USE1P53146 RRT8YOL048C 1029 nt8.68□□□□□ -1.02
USE1P53146 FET5YFL041W 1869 nt8.67□□□□□ -1.02
USE1P53146 LSB3YFR024C-A 1380 nt8.67□□□□□ -1.02
USE1P53146 YLR111WYLR111W 333 nt8.67□□□□□ -1.02
USE1P53146 YOR072WYOR072W 315 nt8.67□□□□□ -1.02
USE1P53146 IMO32YGR031W 1029 nt8.66□□□□□ -1.02
USE1P53146 NPP2YEL016C 1482 nt8.65□□□□□ -1.02
USE1P53146 YMR265CYMR265C 1386 nt8.65□□□□□ -1.02
USE1P53146 INH1YDL181W 258 nt8.65□□□□□ -1.02
USE1P53146 SUV3YPL029W 2214 nt8.65□□□□□ -1.03
USE1P53146 URA8YJR103W 1737 nt8.63□□□□□ -1.03
USE1P53146 YNR064CYNR064C 873 nt8.63□□□□□ -1.03
USE1P53146 RIB7YBR153W 735 nt8.62□□□□□ -1.03
USE1P53146 tE(CUC)DtE(CUC)D 72 nt8.61□□□□□ -1.03
USE1P53146 tE(CUC)ItE(CUC)I 72 nt8.61□□□□□ -1.03
USE1P53146 GLR1YPL091W 1452 nt8.6□□□□□ -1.03
USE1P53146 MEX67YPL169C 1800 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)BtD(GUC)B 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)DtD(GUC)D 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)G1tD(GUC)G1 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)G2tD(GUC)G2 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)I1tD(GUC)I1 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)I2tD(GUC)I2 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)J1tD(GUC)J1 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)J2tD(GUC)J2 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)J3tD(GUC)J3 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)J4tD(GUC)J4 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)KtD(GUC)K 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)L1tD(GUC)L1 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)L2tD(GUC)L2 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)MtD(GUC)M 72 nt8.6□□□□□ -1.03
USE1P53146 tD(GUC)OtD(GUC)O 72 nt8.6□□□□□ -1.03
USE1P53146 HAP5YOR358W 729 nt8.6□□□□□ -1.03
USE1P53146 RIB2YOL066C 1776 nt8.59□□□□□ -1.03
USE1P53146 ADE8YDR408C 645 nt8.59□□□□□ -1.03
USE1P53146 OPI3YJR073C 621 nt8.59□□□□□ -1.03
USE1P53146 YJR114WYJR114W 393 nt8.59□□□□□ -1.03
USE1P53146 YRF1-2YER190W 5046 nt8.59□□□□□ -1.03
USE1P53146 SFL1YOR140W 2301 nt8.58□□□□□ -1.04
USE1P53146 YDR467CYDR467C 327 nt8.58□□□□□ -1.04
USE1P53146 YFR036W-AYFR036W-A 651 nt8.58□□□□□ -1.04
USE1P53146 KEL3YPL263C 1956 nt8.57□□□□□ -1.04
USE1P53146 FRE6YLL051C 2139 nt8.55□□□□□ -1.04
USE1P53146 MIM1YOL026C 342 nt8.55□□□□□ -1.04
USE1P53146 CRC1YOR100C 984 nt8.55□□□□□ -1.04
USE1P53146 RPN14YGL004C 1254 nt8.54□□□□□ -1.04
USE1P53146 TRP2YER090W 1524 nt8.53□□□□□ -1.04
USE1P53146 DAK2YFL053W 1776 nt8.53□□□□□ -1.04
USE1P53146 MTO1YGL236C 2010 nt8.52□□□□□ -1.05
USE1P53146 HBS1YKR084C 1836 nt8.52□□□□□ -1.05
USE1P53146 GPM1YKL152C 744 nt8.5□□□□□ -1.05
USE1P53146 SNZ1YMR096W 894 nt8.5□□□□□ -1.05
USE1P53146 SWT21YNL187W 1074 nt8.5□□□□□ -1.05
USE1P53146 HXT11YOL156W 1704 nt8.5□□□□□ -1.05
USE1P53146 MDL2YPL270W 2322 nt8.5□□□□□ -1.05
USE1P53146 MET1YKR069W 1782 nt8.5□□□□□ -1.05
USE1P53146 THI6YPL214C 1623 nt8.5□□□□□ -1.05
USE1P53146 YMR226CYMR226C 804 nt8.49□□□□□ -1.05
USE1P53146 TVP23YDR084C 600 nt8.48□□□□□ -1.05
USE1P53146 YPI1YFR003C 468 nt8.48□□□□□ -1.05
USE1P53146 KGD2YDR148C 1392 nt8.48□□□□□ -1.05
USE1P53146 DUR3YHL016C 2208 nt8.48□□□□□ -1.05
USE1P53146 YNR029CYNR029C 1290 nt8.47□□□□□ -1.05
USE1P53146 THI3YDL080C 1830 nt8.46□□□□□ -1.06
USE1P53146 YMR244WYMR244W 1068 nt8.46□□□□□ -1.06
USE1P53146 YBL095WYBL095W 813 nt8.46□□□□□ -1.06
USE1P53146 SRM1YGL097W 1449 nt8.46□□□□□ -1.06
USE1P53146 snR31snR31 225 nt8.45□□□□□ -1.06
USE1P53146 YPR126CYPR126C 309 nt8.44□□□□□ -1.06
USE1P53146 AAT1YKL106W 1356 nt8.44□□□□□ -1.06
USE1P53146 YKL053WYKL053W 375 nt8.43□□□□□ -1.06
USE1P53146 EMC3YKL207W 762 nt8.43□□□□□ -1.06
USE1P53146 SPS100YHR139C 981 nt8.42□□□□□ -1.06
USE1P53146 ORT1YOR130C 879 nt8.41□□□□□ -1.06
USE1P53146 YMR316C-BYMR316C-B 309 nt8.4□□□□□ -1.06
USE1P53146 YLR072WYLR072W 2082 nt8.4□□□□□ -1.06
USE1P53146 YMC2YBR104W 990 nt8.39□□□□□ -1.07
USE1P53146 GGA2YHR108W 1758 nt8.38□□□□□ -1.07
USE1P53146 FTH1YBR207W 1398 nt8.38□□□□□ -1.07
USE1P53146 DUS3YLR401C 2007 nt8.38□□□□□ -1.07
USE1P53146 ADH1YOL086C 1047 nt8.37□□□□□ -1.07
USE1P53146 snR4snR4 186 nt8.37□□□□□ -1.07
USE1P53146 SAN1YDR143C 1833 nt8.37□□□□□ -1.07
USE1P53146 THI72YOR192C 1800 nt8.37□□□□□ -1.07
USE1P53146 ESS1YJR017C 513 nt8.36□□□□□ -1.07
USE1P53146 AMF1YOR378W 1548 nt8.35□□□□□ -1.07
USE1P53146 CTI6YPL181W 1521 nt8.34□□□□□ -1.07
USE1P53146 ABZ2YMR289W 1125 nt8.34□□□□□ -1.07
USE1P53146 FIT1YDR534C 1587 nt8.34□□□□□ -1.07
USE1P53146 YMR210WYMR210W 1350 nt8.34□□□□□ -1.07
USE1P53146 SBP1YHL034C 885 nt8.33□□□□□ -1.08
USE1P53146 IML3YBR107C 738 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms