Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 tD(GUC)DtD(GUC)D 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)G1tD(GUC)G1 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)G2tD(GUC)G2 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)I1tD(GUC)I1 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)I2tD(GUC)I2 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)J1tD(GUC)J1 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)J2tD(GUC)J2 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)J3tD(GUC)J3 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)J4tD(GUC)J4 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)KtD(GUC)K 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)L1tD(GUC)L1 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)L2tD(GUC)L2 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)MtD(GUC)M 72 nt7.61□□□□□ -1.19
LSM4P40070 tD(GUC)OtD(GUC)O 72 nt7.61□□□□□ -1.19
LSM4P40070 AGP3YFL055W 1677 nt7.6□□□□□ -1.19
LSM4P40070 HEM14YER014W 1620 nt7.6□□□□□ -1.19
LSM4P40070 GAL3YDR009W 1563 nt7.6□□□□□ -1.19
LSM4P40070 SFL1YOR140W 2301 nt7.6□□□□□ -1.19
LSM4P40070 LSR1LSR1 1175 nt7.6□□□□□ -1.19
LSM4P40070 KRE1YNL322C 942 nt7.6□□□□□ -1.19
LSM4P40070 MHF1YOL086W-A 273 nt7.6□□□□□ -1.19
LSM4P40070 CSM1YCR086W 573 nt7.59□□□□□ -1.19
LSM4P40070 URA6YKL024C 615 nt7.59□□□□□ -1.19
LSM4P40070 DIG1YPL049C 1359 nt7.59□□□□□ -1.2
LSM4P40070 MRS6YOR370C 1812 nt7.58□□□□□ -1.2
LSM4P40070 YKL133CYKL133C 1392 nt7.58□□□□□ -1.2
LSM4P40070 CWP2YKL096W-A 279 nt7.57□□□□□ -1.2
LSM4P40070 HBS1YKR084C 1836 nt7.57□□□□□ -1.2
LSM4P40070 FRA1YLL029W 2250 nt7.56□□□□□ -1.2
LSM4P40070 SWM1YDR260C 513 nt7.56□□□□□ -1.2
LSM4P40070 POT1YIL160C 1254 nt7.56□□□□□ -1.2
LSM4P40070 SNZ1YMR096W 894 nt7.56□□□□□ -1.2
LSM4P40070 SAM50YNL026W 1455 nt7.55□□□□□ -1.2
LSM4P40070 MET30YIL046W 1923 nt7.55□□□□□ -1.2
LSM4P40070 YJL118WYJL118W 660 nt7.54□□□□□ -1.2
LSM4P40070 NSG2YNL156C 900 nt7.54□□□□□ -1.2
LSM4P40070 YNL190WYNL190W 615 nt7.54□□□□□ -1.2
LSM4P40070 YPR126CYPR126C 309 nt7.54□□□□□ -1.2
LSM4P40070 YBL086CYBL086C 1401 nt7.53□□□□□ -1.2
LSM4P40070 SED1YDR077W 1017 nt7.53□□□□□ -1.2
LSM4P40070 NIF3YGL221C 867 nt7.53□□□□□ -1.2
LSM4P40070 APS2YJR058C 444 nt7.53□□□□□ -1.2
LSM4P40070 RPL12BYDR418W 498 nt7.52□□□□□ -1.21
LSM4P40070 SAM3YPL274W 1764 nt7.51□□□□□ -1.21
LSM4P40070 YER190C-AYER190C-A 576 nt7.5□□□□□ -1.21
LSM4P40070 YGR296C-AYGR296C-A 576 nt7.5□□□□□ -1.21
LSM4P40070 YML133W-AYML133W-A 576 nt7.5□□□□□ -1.21
LSM4P40070 YNL339W-AYNL339W-A 576 nt7.5□□□□□ -1.21
LSM4P40070 YPL283W-AYPL283W-A 576 nt7.5□□□□□ -1.21
LSM4P40070 UFO1YML088W 2007 nt7.49□□□□□ -1.21
LSM4P40070 LIP1YMR298W 453 nt7.49□□□□□ -1.21
LSM4P40070 YOR343CYOR343C 327 nt7.49□□□□□ -1.21
LSM4P40070 RIB7YBR153W 735 nt7.49□□□□□ -1.21
LSM4P40070 DUS3YLR401C 2007 nt7.49□□□□□ -1.21
LSM4P40070 PET8YNL003C 855 nt7.48□□□□□ -1.21
LSM4P40070 DUR3YHL016C 2208 nt7.48□□□□□ -1.21
LSM4P40070 ACH1YBL015W 1581 nt7.47□□□□□ -1.21
LSM4P40070 YDL086WYDL086W 822 nt7.47□□□□□ -1.21
LSM4P40070 IGD1YFR017C 588 nt7.47□□□□□ -1.21
LSM4P40070 YPL251WYPL251W 303 nt7.47□□□□□ -1.21
LSM4P40070 RPT5YOR117W 1305 nt7.47□□□□□ -1.21
LSM4P40070 VPS62YGR141W 1404 nt7.46□□□□□ -1.21
LSM4P40070 CDD1YLR245C 429 nt7.46□□□□□ -1.22
LSM4P40070 OYE3YPL171C 1203 nt7.46□□□□□ -1.22
LSM4P40070 CTI6YPL181W 1521 nt7.46□□□□□ -1.22
LSM4P40070 MFG1YDL233W 1377 nt7.46□□□□□ -1.22
LSM4P40070 YHR219WYHR219W 1875 nt7.45□□□□□ -1.22
LSM4P40070 RSC4YKR008W 1878 nt7.45□□□□□ -1.22
LSM4P40070 LSM5YER146W 282 nt7.45□□□□□ -1.22
LSM4P40070 SPP2YOR148C 558 nt7.45□□□□□ -1.22
LSM4P40070 LAS17YOR181W 1902 nt7.44□□□□□ -1.22
LSM4P40070 LEU9YOR108W 1815 nt7.44□□□□□ -1.22
LSM4P40070 SAM2YDR502C 1155 nt7.44□□□□□ -1.22
LSM4P40070 YOR268CYOR268C 399 nt7.44□□□□□ -1.22
LSM4P40070 PAU21YOR394W 495 nt7.44□□□□□ -1.22
LSM4P40070 PAU22YPL282C 495 nt7.44□□□□□ -1.22
LSM4P40070 TOS1YBR162C 1368 nt7.43□□□□□ -1.22
LSM4P40070 ADE16YLR028C 1776 nt7.43□□□□□ -1.22
LSM4P40070 FET5YFL041W 1869 nt7.43□□□□□ -1.22
LSM4P40070 RTG2YGL252C 1767 nt7.42□□□□□ -1.22
LSM4P40070 ORT1YOR130C 879 nt7.42□□□□□ -1.22
LSM4P40070 IPL1YPL209C 1104 nt7.42□□□□□ -1.22
LSM4P40070 IML3YBR107C 738 nt7.42□□□□□ -1.22
LSM4P40070 THI6YPL214C 1623 nt7.41□□□□□ -1.22
LSM4P40070 INH1YDL181W 258 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)DtA(AGC)D 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)FtA(AGC)F 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)GtA(AGC)G 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)HtA(AGC)H 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)JtA(AGC)J 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)K1tA(AGC)K1 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)K2tA(AGC)K2 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)LtA(AGC)L 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)M1tA(AGC)M1 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)M2tA(AGC)M2 73 nt7.41□□□□□ -1.22
LSM4P40070 tA(AGC)PtA(AGC)P 73 nt7.41□□□□□ -1.22
LSM4P40070 YAL016C-AYAL016C-A 315 nt7.41□□□□□ -1.22
LSM4P40070 FMS1YMR020W 1527 nt7.41□□□□□ -1.22
LSM4P40070 RPD3YNL330C 1302 nt7.4□□□□□ -1.22
LSM4P40070 MSC1YML128C 1542 nt7.39□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms