Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 FUB1YCR076C 753 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)DtA(AGC)D 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)FtA(AGC)F 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)GtA(AGC)G 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)HtA(AGC)H 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)JtA(AGC)J 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)K1tA(AGC)K1 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)K2tA(AGC)K2 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)LtA(AGC)L 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)M1tA(AGC)M1 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)M2tA(AGC)M2 73 nt9.13□□□□□ -0.95
PEX28P38848 tA(AGC)PtA(AGC)P 73 nt9.13□□□□□ -0.95
PEX28P38848 SWM1YDR260C 513 nt9.12□□□□□ -0.95
PEX28P38848 PUS5YLR165C 765 nt9.12□□□□□ -0.95
PEX28P38848 RDN25-1RDN25-1 3396 nt9.12□□□□□ -0.95
PEX28P38848 RDN25-2RDN25-2 3396 nt9.12□□□□□ -0.95
PEX28P38848 URA6YKL024C 615 nt9.11□□□□□ -0.95
PEX28P38848 OYE3YPL171C 1203 nt9.11□□□□□ -0.95
PEX28P38848 TMA23YMR269W 636 nt9.1□□□□□ -0.95
PEX28P38848 SRN2YLR119W 642 nt9.09□□□□□ -0.95
PEX28P38848 MAS1YLR163C 1389 nt9.09□□□□□ -0.95
PEX28P38848 BNS1YGR230W 414 nt9.08□□□□□ -0.96
PEX28P38848 FHN1YGR131W 525 nt9.07□□□□□ -0.96
PEX28P38848 CDD1YLR245C 429 nt9.07□□□□□ -0.96
PEX28P38848 SPS100YHR139C 981 nt9.06□□□□□ -0.96
PEX28P38848 YIR018C-AYIR018C-A 138 nt9.06□□□□□ -0.96
PEX28P38848 YMR007WYMR007W 381 nt9.06□□□□□ -0.96
PEX28P38848 PET8YNL003C 855 nt9.06□□□□□ -0.96
PEX28P38848 HMT1YBR034C 1047 nt9.06□□□□□ -0.96
PEX28P38848 GID7YCL039W 2238 nt9.06□□□□□ -0.96
PEX28P38848 LYS20YDL182W 1287 nt9.05□□□□□ -0.96
PEX28P38848 REC114YMR133W 1287 nt9.05□□□□□ -0.96
PEX28P38848 IMO32YGR031W 1029 nt9.04□□□□□ -0.96
PEX28P38848 FLX1YIL134W 936 nt9.04□□□□□ -0.96
PEX28P38848 DDI1YER143W 1287 nt9.03□□□□□ -0.96
PEX28P38848 RCR1YBR005W 642 nt9.03□□□□□ -0.96
PEX28P38848 RPL12BYDR418W 498 nt9.02□□□□□ -0.97
PEX28P38848 NAS2YIL007C 663 nt9.02□□□□□ -0.97
PEX28P38848 OSH7YHR001W 1314 nt9.02□□□□□ -0.97
PEX28P38848 DLD2YDL178W 1593 nt9.01□□□□□ -0.97
PEX28P38848 YOR343CYOR343C 327 nt9.01□□□□□ -0.97
PEX28P38848 BMT5YIL096C 1011 nt9□□□□□ -0.97
PEX28P38848 LSM5YER146W 282 nt8.99□□□□□ -0.97
PEX28P38848 ATG17YLR423C 1254 nt8.99□□□□□ -0.97
PEX28P38848 SNF1YDR477W 1902 nt8.99□□□□□ -0.97
PEX28P38848 THP3YPR045C 1413 nt8.98□□□□□ -0.97
PEX28P38848 KDX1YKL161C 1302 nt8.98□□□□□ -0.97
PEX28P38848 FLR1YBR008C 1647 nt8.97□□□□□ -0.97
PEX28P38848 SOL2YCR073W-A 948 nt8.96□□□□□ -0.98
PEX28P38848 YFR036W-AYFR036W-A 651 nt8.96□□□□□ -0.98
PEX28P38848 ZRT3YKL175W 1512 nt8.95□□□□□ -0.98
PEX28P38848 SER2YGR208W 930 nt8.95□□□□□ -0.98
PEX28P38848 YAL016C-AYAL016C-A 315 nt8.95□□□□□ -0.98
PEX28P38848 FSH2YMR222C 672 nt8.95□□□□□ -0.98
PEX28P38848 RRT8YOL048C 1029 nt8.94□□□□□ -0.98
PEX28P38848 YPS3YLR121C 1527 nt8.93□□□□□ -0.98
PEX28P38848 RSC8YFR037C 1674 nt8.93□□□□□ -0.98
PEX28P38848 ADE8YDR408C 645 nt8.92□□□□□ -0.98
PEX28P38848 SPE2YOL052C 1191 nt8.92□□□□□ -0.98
PEX28P38848 YPL071CYPL071C 471 nt8.92□□□□□ -0.98
PEX28P38848 CMP2YML057W 1815 nt8.91□□□□□ -0.98
PEX28P38848 HTS1YPR033C 1641 nt8.91□□□□□ -0.98
PEX28P38848 PBP1YGR178C 2169 nt8.91□□□□□ -0.98
PEX28P38848 HRA1HRA1 564 nt8.91□□□□□ -0.98
PEX28P38848 CYC3YAL039C 810 nt8.91□□□□□ -0.98
PEX28P38848 BIO5YNR056C 1686 nt8.91□□□□□ -0.98
PEX28P38848 YDR306CYDR306C 1437 nt8.9□□□□□ -0.98
PEX28P38848 TVP23YDR084C 600 nt8.9□□□□□ -0.98
PEX28P38848 PHB2YGR231C 933 nt8.9□□□□□ -0.98
PEX28P38848 ADH3YMR083W 1128 nt8.9□□□□□ -0.98
PEX28P38848 YOR268CYOR268C 399 nt8.9□□□□□ -0.98
PEX28P38848 CYT2YKL087C 675 nt8.89□□□□□ -0.99
PEX28P38848 HEL2YDR266C 1920 nt8.88□□□□□ -0.99
PEX28P38848 BET2YPR176C 978 nt8.88□□□□□ -0.99
PEX28P38848 FMS1YMR020W 1527 nt8.88□□□□□ -0.99
PEX28P38848 HEM13YDR044W 987 nt8.87□□□□□ -0.99
PEX28P38848 MOB1YIL106W 945 nt8.87□□□□□ -0.99
PEX28P38848 MFG1YDL233W 1377 nt8.86□□□□□ -0.99
PEX28P38848 PUS7YOR243C 2031 nt8.86□□□□□ -0.99
PEX28P38848 GRH1YDR517W 1119 nt8.85□□□□□ -0.99
PEX28P38848 PCP1YGR101W 1041 nt8.85□□□□□ -0.99
PEX28P38848 SPP2YOR148C 558 nt8.85□□□□□ -0.99
PEX28P38848 ESBP6YNL125C 2022 nt8.85□□□□□ -0.99
PEX28P38848 YDR455CYDR455C 309 nt8.84□□□□□ -0.99
PEX28P38848 ASP3-1YLR155C 1089 nt8.83□□□□□ -1
PEX28P38848 ASP3-2YLR157C 1089 nt8.83□□□□□ -1
PEX28P38848 ASP3-3YLR158C 1089 nt8.83□□□□□ -1
PEX28P38848 ASP3-4YLR160C 1089 nt8.83□□□□□ -1
PEX28P38848 MCM5YLR274W 2328 nt8.83□□□□□ -1
PEX28P38848 TAT2YOL020W 1779 nt8.83□□□□□ -1
PEX28P38848 UTP6YDR449C 1323 nt8.82□□□□□ -1
PEX28P38848 ERG13YML126C 1476 nt8.81□□□□□ -1
PEX28P38848 RMA1YKL132C 1293 nt8.8□□□□□ -1
PEX28P38848 SRP102YKL154W 735 nt8.8□□□□□ -1
PEX28P38848 DIG1YPL049C 1359 nt8.79□□□□□ -1
PEX28P38848 TOS1YBR162C 1368 nt8.79□□□□□ -1
PEX28P38848 YJL067WYJL067W 351 nt8.79□□□□□ -1
PEX28P38848 ENO2YHR174W 1314 nt8.79□□□□□ -1
PEX28P38848 TGA1tA(UGC)A 73 nt8.78□□□□□ -1
PEX28P38848 tA(UGC)EtA(UGC)E 73 nt8.78□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 9.2 ms