Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 MOB1YIL106W 945 nt13.74□□□□□ -0.21
TY1B-HO13535 PRP4YPR178W 1398 nt13.74□□□□□ -0.21
TY1B-HO13535 RSC8YFR037C 1674 nt13.74□□□□□ -0.21
TY1B-HO13535 YPS3YLR121C 1527 nt13.69□□□□□ -0.22
TY1B-HO13535 SER2YGR208W 930 nt13.68□□□□□ -0.22
TY1B-HO13535 RCR1YBR005W 642 nt13.68□□□□□ -0.22
TY1B-HO13535 YMR206WYMR206W 942 nt13.67□□□□□ -0.22
TY1B-HO13535 OSH7YHR001W 1314 nt13.67□□□□□ -0.22
TY1B-HO13535 URA6YKL024C 615 nt13.66□□□□□ -0.22
TY1B-HO13535 DLD2YDL178W 1593 nt13.66□□□□□ -0.22
TY1B-HO13535 YAL016C-AYAL016C-A 315 nt13.66□□□□□ -0.22
TY1B-HO13535 YDR455CYDR455C 309 nt13.64□□□□□ -0.23
TY1B-HO13535 YOR268CYOR268C 399 nt13.64□□□□□ -0.23
TY1B-HO13535 HEM13YDR044W 987 nt13.63□□□□□ -0.23
TY1B-HO13535 IMO32YGR031W 1029 nt13.63□□□□□ -0.23
TY1B-HO13535 SOL2YCR073W-A 948 nt13.63□□□□□ -0.23
TY1B-HO13535 tL(UAA)B1tL(UAA)B1 84 nt13.62□□□□□ -0.23
TY1B-HO13535 tL(UAA)B2tL(UAA)B2 84 nt13.62□□□□□ -0.23
TY1B-HO13535 tL(UAA)DtL(UAA)D 84 nt13.62□□□□□ -0.23
TY1B-HO13535 SUP51tL(UAA)J 84 nt13.62□□□□□ -0.23
TY1B-HO13535 tL(UAA)KtL(UAA)K 84 nt13.62□□□□□ -0.23
TY1B-HO13535 tL(UAA)LtL(UAA)L 84 nt13.62□□□□□ -0.23
TY1B-HO13535 tL(UAA)NtL(UAA)N 84 nt13.62□□□□□ -0.23
TY1B-HO13535 PET8YNL003C 855 nt13.62□□□□□ -0.23
TY1B-HO13535 TAT2YOL020W 1779 nt13.61□□□□□ -0.23
TY1B-HO13535 HTS1YPR033C 1641 nt13.59□□□□□ -0.23
TY1B-HO13535 OXA1YER154W 1209 nt13.59□□□□□ -0.23
TY1B-HO13535 EMC3YKL207W 762 nt13.59□□□□□ -0.23
TY1B-HO13535 ENO2YHR174W 1314 nt13.57□□□□□ -0.24
TY1B-HO13535 BET2YPR176C 978 nt13.56□□□□□ -0.24
TY1B-HO13535 ERG13YML126C 1476 nt13.54□□□□□ -0.24
TY1B-HO13535 FMS1YMR020W 1527 nt13.54□□□□□ -0.24
TY1B-HO13535 SPP2YOR148C 558 nt13.53□□□□□ -0.24
TY1B-HO13535 HRA1HRA1 564 nt13.5□□□□□ -0.25
TY1B-HO13535 PET18YCR020C 648 nt13.48□□□□□ -0.25
TY1B-HO13535 SRP102YKL154W 735 nt13.48□□□□□ -0.25
TY1B-HO13535 ERO1YML130C 1692 nt13.47□□□□□ -0.25
TY1B-HO13535 YMR210WYMR210W 1350 nt13.45□□□□□ -0.26
TY1B-HO13535 ELP4YPL101W 1371 nt13.45□□□□□ -0.26
TY1B-HO13535 YJL160CYJL160C 864 nt13.45□□□□□ -0.26
TY1B-HO13535 YJL067WYJL067W 351 nt13.43□□□□□ -0.26
TY1B-HO13535 SDS24YBR214W 1584 nt13.43□□□□□ -0.26
TY1B-HO13535 DIG1YPL049C 1359 nt13.43□□□□□ -0.26
TY1B-HO13535 EDC2YER035W 438 nt13.43□□□□□ -0.26
TY1B-HO13535 YPL247CYPL247C 1572 nt13.41□□□□□ -0.26
TY1B-HO13535 UTR5YEL035C 501 nt13.41□□□□□ -0.26
TY1B-HO13535 CYC3YAL039C 810 nt13.41□□□□□ -0.26
TY1B-HO13535 TOS1YBR162C 1368 nt13.41□□□□□ -0.26
TY1B-HO13535 BIO5YNR056C 1686 nt13.41□□□□□ -0.26
TY1B-HO13535 YGR210CYGR210C 1236 nt13.4□□□□□ -0.26
TY1B-HO13535 OPI3YJR073C 621 nt13.4□□□□□ -0.26
TY1B-HO13535 NAM8YHR086W 1572 nt13.39□□□□□ -0.27
TY1B-HO13535 PRE5YMR314W 705 nt13.39□□□□□ -0.27
TY1B-HO13535 BAP3YDR046C 1815 nt13.39□□□□□ -0.27
TY1B-HO13535 FSH2YMR222C 672 nt13.38□□□□□ -0.27
TY1B-HO13535 SDH8YBR269C 417 nt13.38□□□□□ -0.27
TY1B-HO13535 TPC1YGR096W 945 nt13.37□□□□□ -0.27
TY1B-HO13535 REX2YLR059C 810 nt13.37□□□□□ -0.27
TY1B-HO13535 YNR064CYNR064C 873 nt13.35□□□□□ -0.27
TY1B-HO13535 ZRT3YKL175W 1512 nt13.34□□□□□ -0.27
TY1B-HO13535 YKR012CYKR012C 378 nt13.34□□□□□ -0.27
TY1B-HO13535 YLR280CYLR280C 351 nt13.34□□□□□ -0.27
TY1B-HO13535 AIM1YAL046C 357 nt13.32□□□□□ -0.28
TY1B-HO13535 TVP23YDR084C 600 nt13.31□□□□□ -0.28
TY1B-HO13535 ASP3-1YLR155C 1089 nt13.31□□□□□ -0.28
TY1B-HO13535 ASP3-2YLR157C 1089 nt13.31□□□□□ -0.28
TY1B-HO13535 ASP3-3YLR158C 1089 nt13.31□□□□□ -0.28
TY1B-HO13535 ASP3-4YLR160C 1089 nt13.31□□□□□ -0.28
TY1B-HO13535 CWC15YDR163W 528 nt13.3□□□□□ -0.28
TY1B-HO13535 ENO1YGR254W 1314 nt13.28□□□□□ -0.28
TY1B-HO13535 ELO1YJL196C 933 nt13.27□□□□□ -0.28
TY1B-HO13535 ACH1YBL015W 1581 nt13.27□□□□□ -0.29
TY1B-HO13535 YPL108WYPL108W 507 nt13.26□□□□□ -0.29
TY1B-HO13535 ADA2YDR448W 1305 nt13.25□□□□□ -0.29
TY1B-HO13535 AMF1YOR378W 1548 nt13.24□□□□□ -0.29
TY1B-HO13535 RRT8YOL048C 1029 nt13.24□□□□□ -0.29
TY1B-HO13535 YJR149WYJR149W 1215 nt13.22□□□□□ -0.29
TY1B-HO13535 PAC11YDR488C 1602 nt13.21□□□□□ -0.29
TY1B-HO13535 VBA3YCL069W 1377 nt13.2□□□□□ -0.3
TY1B-HO13535 LEU2YCL018W 1095 nt13.17□□□□□ -0.3
TY1B-HO13535 SAC7YDR389W 1965 nt13.17□□□□□ -0.3
TY1B-HO13535 MRP1YDR347W 966 nt13.15□□□□□ -0.31
TY1B-HO13535 LSP1YPL004C 1026 nt13.15□□□□□ -0.31
TY1B-HO13535 ADE1YAR015W 921 nt13.1□□□□□ -0.31
TY1B-HO13535 BOR1YNL275W 1731 nt13.07□□□□□ -0.32
TY1B-HO13535 LSB6YJL100W 1824 nt13.07□□□□□ -0.32
TY1B-HO13535 SWT21YNL187W 1074 nt13.05□□□□□ -0.32
TY1B-HO13535 SFL1YOR140W 2301 nt13.03□□□□□ -0.32
TY1B-HO13535 YMR166CYMR166C 1107 nt13.03□□□□□ -0.32
TY1B-HO13535 VPS62YGR141W 1404 nt13.01□□□□□ -0.33
TY1B-HO13535 GDH1YOR375C 1365 nt13□□□□□ -0.33
TY1B-HO13535 FUS3YBL016W 1062 nt12.99□□□□□ -0.33
TY1B-HO13535 YKL053WYKL053W 375 nt12.97□□□□□ -0.33
TY1B-HO13535 YLR046CYLR046C 813 nt12.94□□□□□ -0.34
TY1B-HO13535 MET1YKR069W 1782 nt12.93□□□□□ -0.34
TY1B-HO13535 YJL043WYJL043W 774 nt12.92□□□□□ -0.34
TY1B-HO13535 SRP54YPR088C 1626 nt12.91□□□□□ -0.34
TY1B-HO13535 PET494YNR045W 1470 nt12.9□□□□□ -0.34
TY1B-HO13535 YDL086WYDL086W 822 nt12.89□□□□□ -0.35
TY1B-HO13535 COS10YNR075W 1125 nt12.87□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 54 ms