Protein–RNA interactions for Protein: J3QMJ4

Smlr1, Small leucine-rich protein 1, mousemouse

Predictions only

Length 66 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smlr1J3QMJ4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smlr1J3QMJ4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smlr1J3QMJ4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.69■□□□□ 0.1
Smlr1J3QMJ4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smlr1J3QMJ4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smlr1J3QMJ4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smlr1J3QMJ4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.68■□□□□ 0.1
Smlr1J3QMJ4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smlr1J3QMJ4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smlr1J3QMJ4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smlr1J3QMJ4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smlr1J3QMJ4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smlr1J3QMJ4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smlr1J3QMJ4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smlr1J3QMJ4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smlr1J3QMJ4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smlr1J3QMJ4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smlr1J3QMJ4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smlr1J3QMJ4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smlr1J3QMJ4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smlr1J3QMJ4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smlr1J3QMJ4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smlr1J3QMJ4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC15.62■□□□□ 0.09
Smlr1J3QMJ4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smlr1J3QMJ4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smlr1J3QMJ4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.61■□□□□ 0.09
Smlr1J3QMJ4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smlr1J3QMJ4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smlr1J3QMJ4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smlr1J3QMJ4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smlr1J3QMJ4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smlr1J3QMJ4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smlr1J3QMJ4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smlr1J3QMJ4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smlr1J3QMJ4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smlr1J3QMJ4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Smlr1J3QMJ4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smlr1J3QMJ4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Smlr1J3QMJ4 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.58■□□□□ 0.08
Smlr1J3QMJ4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smlr1J3QMJ4 Gm2415-204ENSMUST00000190235 2004 ntBASIC15.56■□□□□ 0.08
Smlr1J3QMJ4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smlr1J3QMJ4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smlr1J3QMJ4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smlr1J3QMJ4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smlr1J3QMJ4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smlr1J3QMJ4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smlr1J3QMJ4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smlr1J3QMJ4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Smlr1J3QMJ4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.54■□□□□ 0.08
Smlr1J3QMJ4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smlr1J3QMJ4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smlr1J3QMJ4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.53■□□□□ 0.08
Smlr1J3QMJ4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.53■□□□□ 0.08
Smlr1J3QMJ4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smlr1J3QMJ4 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.53■□□□□ 0.08
Smlr1J3QMJ4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.52■□□□□ 0.08
Smlr1J3QMJ4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Smlr1J3QMJ4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smlr1J3QMJ4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smlr1J3QMJ4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smlr1J3QMJ4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smlr1J3QMJ4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smlr1J3QMJ4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smlr1J3QMJ4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Smlr1J3QMJ4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Smlr1J3QMJ4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smlr1J3QMJ4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smlr1J3QMJ4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Smlr1J3QMJ4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smlr1J3QMJ4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smlr1J3QMJ4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smlr1J3QMJ4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smlr1J3QMJ4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smlr1J3QMJ4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smlr1J3QMJ4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smlr1J3QMJ4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smlr1J3QMJ4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smlr1J3QMJ4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smlr1J3QMJ4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smlr1J3QMJ4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smlr1J3QMJ4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smlr1J3QMJ4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smlr1J3QMJ4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Smlr1J3QMJ4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smlr1J3QMJ4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smlr1J3QMJ4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms