Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 TMN3YER113C 2121 nt3.05□□□□□ -1.92
RPN11P43588 SEC26YDR238C 2922 nt3.05□□□□□ -1.92
RPN11P43588 STE14YDR410C 720 nt3.05□□□□□ -1.92
RPN11P43588 CHZ1YER030W 462 nt3.05□□□□□ -1.92
RPN11P43588 TCD1YHR003C 1290 nt3.05□□□□□ -1.92
RPN11P43588 YJL086CYJL086C 369 nt3.05□□□□□ -1.92
RPN11P43588 YKT6YKL196C 603 nt3.05□□□□□ -1.92
RPN11P43588 YKL202WYKL202W 582 nt3.05□□□□□ -1.92
RPN11P43588 COX8YLR395C 237 nt3.05□□□□□ -1.92
RPN11P43588 PHO80YOL001W 882 nt3.05□□□□□ -1.92
RPN11P43588 BCK1YJL095W 4437 nt3.05□□□□□ -1.92
RPN11P43588 BUD4YJR092W 4344 nt3.05□□□□□ -1.92
RPN11P43588 NUP170YBL079W 4509 nt3.04□□□□□ -1.92
RPN11P43588 RPO41YFL036W 4056 nt3.04□□□□□ -1.92
RPN11P43588 MET32YDR253C 576 nt3.04□□□□□ -1.92
RPN11P43588 PEX10YDR265W 1014 nt3.04□□□□□ -1.92
RPN11P43588 RPS23AYGR118W 438 nt3.04□□□□□ -1.92
RPN11P43588 YIL156W-BYIL156W-B 222 nt3.04□□□□□ -1.92
RPN11P43588 LSM8YJR022W 330 nt3.04□□□□□ -1.92
RPN11P43588 YLR252WYLR252W 306 nt3.04□□□□□ -1.92
RPN11P43588 YPR096CYPR096C 303 nt3.04□□□□□ -1.92
RPN11P43588 RPS23BYPR132W 438 nt3.04□□□□□ -1.92
RPN11P43588 AXL1YPR122W 3627 nt3.04□□□□□ -1.92
RPN11P43588 KIP1YBL063W 3336 nt3.04□□□□□ -1.92
RPN11P43588 SPP382YLR424W 2127 nt3.04□□□□□ -1.92
RPN11P43588 STN1YDR082W 1485 nt3.03□□□□□ -1.92
RPN11P43588 MSH2YOL090W 2895 nt3.03□□□□□ -1.92
RPN11P43588 BNI4YNL233W 2679 nt3.03□□□□□ -1.92
RPN11P43588 SRL3YKR091W 741 nt3.03□□□□□ -1.92
RPN11P43588 YMR173W-AYMR173W-A 1185 nt3.03□□□□□ -1.92
RPN11P43588 YMR304C-AYMR304C-A 351 nt3.03□□□□□ -1.92
RPN11P43588 GPI15YNL038W 690 nt3.03□□□□□ -1.92
RPN11P43588 ATX2YOR079C 942 nt3.03□□□□□ -1.92
RPN11P43588 YOR169CYOR169C 465 nt3.03□□□□□ -1.92
RPN11P43588 YPL142CYPL142C 318 nt3.03□□□□□ -1.92
RPN11P43588 ARK1YNL020C 1917 nt3.03□□□□□ -1.92
RPN11P43588 SPR3YGR059W 1539 nt3.03□□□□□ -1.92
RPN11P43588 MNT3YIL014W 1893 nt3.03□□□□□ -1.93
RPN11P43588 JJJ2YJL162C 1752 nt3.02□□□□□ -1.93
RPN11P43588 PDR11YIL013C 4236 nt3.02□□□□□ -1.93
RPN11P43588 YRR1YOR162C 2433 nt3.02□□□□□ -1.93
RPN11P43588 BPT1YLL015W 4680 nt3.02□□□□□ -1.93
RPN11P43588 INP53YOR109W 3324 nt3.02□□□□□ -1.93
RPN11P43588 YOR192C-AYOR192C-A 1317 nt3.02□□□□□ -1.93
RPN11P43588 HMRA1YCR097W 381 nt3.02□□□□□ -1.93
RPN11P43588 YGL082WYGL082W 1146 nt3.02□□□□□ -1.93
RPN11P43588 FPR1YNL135C 345 nt3.02□□□□□ -1.93
RPN11P43588 YPL205CYPL205C 345 nt3.02□□□□□ -1.93
RPN11P43588 ROM1YGR070W 3468 nt3.02□□□□□ -1.93
RPN11P43588 EAP1YKL204W 1899 nt3.02□□□□□ -1.93
RPN11P43588 UBP16YPL072W 1500 nt3.02□□□□□ -1.93
RPN11P43588 SNQ2YDR011W 4506 nt3.02□□□□□ -1.93
RPN11P43588 NUM1YDR150W 8247 nt3.02□□□□□ -1.93
RPN11P43588 YDR098C-BYDR098C-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YDR210C-DYDR210C-D 5268 nt3.01□□□□□ -1.93
RPN11P43588 YDR316W-BYDR316W-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YDR365W-BYDR365W-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YER138CYER138C 5268 nt3.01□□□□□ -1.93
RPN11P43588 YER160CYER160C 5268 nt3.01□□□□□ -1.93
RPN11P43588 YGR038C-BYGR038C-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YGR161C-DYGR161C-D 5268 nt3.01□□□□□ -1.93
RPN11P43588 YJR027WYJR027W 5268 nt3.01□□□□□ -1.93
RPN11P43588 YLR157C-BYLR157C-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YML039WYML039W 5268 nt3.01□□□□□ -1.93
RPN11P43588 YML045WYML045W 5268 nt3.01□□□□□ -1.93
RPN11P43588 YMR050CYMR050C 5268 nt3.01□□□□□ -1.93
RPN11P43588 YOL103W-BYOL103W-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YBR012W-BYBR012W-B 5271 nt3.01□□□□□ -1.93
RPN11P43588 YOR142W-BYOR142W-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YPL257W-BYPL257W-B 5268 nt3.01□□□□□ -1.93
RPN11P43588 YPR158W-BYPR158W-B 5271 nt3.01□□□□□ -1.93
RPN11P43588 KAP95YLR347C 2586 nt3.01□□□□□ -1.93
RPN11P43588 YFL065CYFL065C 309 nt3.01□□□□□ -1.93
RPN11P43588 YMR013C-AYMR013C-A 150 nt3.01□□□□□ -1.93
RPN11P43588 TOM22YNL131W 459 nt3.01□□□□□ -1.93
RPN11P43588 YDR034C-DYDR034C-D 5313 nt3.01□□□□□ -1.93
RPN11P43588 TAF2YCR042C 4224 nt3.01□□□□□ -1.93
RPN11P43588 YBT1YLL048C 4986 nt3□□□□□ -1.93
RPN11P43588 HMLALPHA2YCL067C 633 nt3□□□□□ -1.93
RPN11P43588 MATALPHA2YCR039C 633 nt3□□□□□ -1.93
RPN11P43588 IRC2YDR112W 309 nt3□□□□□ -1.93
RPN11P43588 MDV1YJL112W 2145 nt3□□□□□ -1.93
RPN11P43588 RRG8YPR116W 834 nt3□□□□□ -1.93
RPN11P43588 ALY1YKR021W 2748 nt3□□□□□ -1.93
RPN11P43588 CEP3YMR168C 1827 nt3□□□□□ -1.93
RPN11P43588 GDI1YER136W 1356 nt3□□□□□ -1.93
RPN11P43588 YGR067CYGR067C 2415 nt2.99□□□□□ -1.93
RPN11P43588 HNT1YDL125C 477 nt2.99□□□□□ -1.93
RPN11P43588 YER175W-AYER175W-A 165 nt2.99□□□□□ -1.93
RPN11P43588 RPL9AYGL147C 576 nt2.99□□□□□ -1.93
RPN11P43588 RPL16AYIL133C 600 nt2.99□□□□□ -1.93
RPN11P43588 YIR040CYIR040C 333 nt2.99□□□□□ -1.93
RPN11P43588 AFB1YLR040C 675 nt2.99□□□□□ -1.93
RPN11P43588 DDR48YMR173W 1293 nt2.99□□□□□ -1.93
RPN11P43588 RRT16YNL105W 429 nt2.99□□□□□ -1.93
RPN11P43588 SFM1YOR021C 642 nt2.99□□□□□ -1.93
RPN11P43588 HEM4YOR278W 828 nt2.99□□□□□ -1.93
RPN11P43588 RPL20BYOR312C 519 nt2.99□□□□□ -1.93
RPN11P43588 PHO91YNR013C 2685 nt2.98□□□□□ -1.93
RPN11P43588 YDR199WYDR199W 366 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 26.1 ms