Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 IRC13YOR235W 315 nt2.22□□□□□ -2.05
RRP40Q08285 YPL135C-AYPL135C-A 174 nt2.22□□□□□ -2.05
RRP40Q08285 CBP6YBR120C 489 nt2.22□□□□□ -2.05
RRP40Q08285 SSN2YDR443C 4263 nt2.21□□□□□ -2.06
RRP40Q08285 TOF1YNL273W 3717 nt2.21□□□□□ -2.06
RRP40Q08285 DPP1YDR284C 870 nt2.21□□□□□ -2.06
RRP40Q08285 AGE1YDR524C 1449 nt2.21□□□□□ -2.06
RRP40Q08285 VMA10YHR039C-A 345 nt2.21□□□□□ -2.06
RRP40Q08285 ARG3YJL088W 1017 nt2.21□□□□□ -2.06
RRP40Q08285 YKL131WYKL131W 522 nt2.21□□□□□ -2.06
RRP40Q08285 BET3YKR068C 582 nt2.21□□□□□ -2.06
RRP40Q08285 AIM36YMR157C 768 nt2.21□□□□□ -2.06
RRP40Q08285 RPL25YOL127W 429 nt2.21□□□□□ -2.06
RRP40Q08285 BAG7YOR134W 1230 nt2.21□□□□□ -2.06
RRP40Q08285 DUG2YBR281C 2637 nt2.21□□□□□ -2.06
RRP40Q08285 OSW7YFR039C 1533 nt2.21□□□□□ -2.06
RRP40Q08285 SVL3YPL032C 2478 nt2.2□□□□□ -2.06
RRP40Q08285 SNX41YDR425W 1878 nt2.2□□□□□ -2.06
RRP40Q08285 DNL4YOR005C 2835 nt2.2□□□□□ -2.06
RRP40Q08285 HOP1YIL072W 1818 nt2.2□□□□□ -2.06
RRP40Q08285 SCD5YOR329C 2619 nt2.2□□□□□ -2.06
RRP40Q08285 APC11YDL008W 498 nt2.2□□□□□ -2.06
RRP40Q08285 UBC9YDL064W 474 nt2.2□□□□□ -2.06
RRP40Q08285 SEC4YFL005W 648 nt2.2□□□□□ -2.06
RRP40Q08285 YFL015CYFL015C 495 nt2.2□□□□□ -2.06
RRP40Q08285 YFR054CYFR054C 579 nt2.2□□□□□ -2.06
RRP40Q08285 YGL039WYGL039W 1047 nt2.2□□□□□ -2.06
RRP40Q08285 SAE2YGL175C 1038 nt2.2□□□□□ -2.06
RRP40Q08285 ERG25YGR060W 930 nt2.2□□□□□ -2.06
RRP40Q08285 HTD2YHR067W 843 nt2.2□□□□□ -2.06
RRP40Q08285 YKL165C-AYKL165C-A 234 nt2.2□□□□□ -2.06
RRP40Q08285 BOS1YLR078C 735 nt2.2□□□□□ -2.06
RRP40Q08285 TMA10YLR327C 261 nt2.2□□□□□ -2.06
RRP40Q08285 RPS29AYLR388W 171 nt2.2□□□□□ -2.06
RRP40Q08285 RPN8YOR261C 1017 nt2.2□□□□□ -2.06
RRP40Q08285 DAD3YBR233W-A 285 nt2.2□□□□□ -2.06
RRP40Q08285 TFB1YDR311W 1929 nt2.2□□□□□ -2.06
RRP40Q08285 MRP10YDL045W-A 288 nt2.19□□□□□ -2.06
RRP40Q08285 NRG1YDR043C 696 nt2.19□□□□□ -2.06
RRP40Q08285 YIL141WYIL141W 390 nt2.19□□□□□ -2.06
RRP40Q08285 CWC24YLR323C 780 nt2.19□□□□□ -2.06
RRP40Q08285 RPS1AYLR441C 768 nt2.19□□□□□ -2.06
RRP40Q08285 MER1YNL210W 813 nt2.19□□□□□ -2.06
RRP40Q08285 YPL142CYPL142C 318 nt2.19□□□□□ -2.06
RRP40Q08285 APL5YPL195W 2799 nt2.19□□□□□ -2.06
RRP40Q08285 BIT61YJL058C 1632 nt2.18□□□□□ -2.06
RRP40Q08285 YEL010WYEL010W 351 nt2.18□□□□□ -2.06
RRP40Q08285 AAD16YFL057C 459 nt2.18□□□□□ -2.06
RRP40Q08285 COG7YGL005C 840 nt2.18□□□□□ -2.06
RRP40Q08285 YIR036W-AYIR036W-A 402 nt2.18□□□□□ -2.06
RRP40Q08285 ARC18YLR370C 537 nt2.18□□□□□ -2.06
RRP40Q08285 FYV6YNL133C 522 nt2.18□□□□□ -2.06
RRP40Q08285 PEX17YNL214W 600 nt2.18□□□□□ -2.06
RRP40Q08285 COQ10YOL008W 624 nt2.18□□□□□ -2.06
RRP40Q08285 NOP12YOL041C 1380 nt2.18□□□□□ -2.06
RRP40Q08285 SYO1YDL063C 1863 nt2.18□□□□□ -2.06
RRP40Q08285 GET1YGL020C 708 nt2.17□□□□□ -2.06
RRP40Q08285 YGL177WYGL177W 348 nt2.17□□□□□ -2.06
RRP40Q08285 PSF2YJL072C 642 nt2.17□□□□□ -2.06
RRP40Q08285 YMR181CYMR181C 465 nt2.17□□□□□ -2.06
RRP40Q08285 YBL108WYBL108W 306 nt2.17□□□□□ -2.06
RRP40Q08285 YBR013CYBR013C 390 nt2.17□□□□□ -2.06
RRP40Q08285 YJL049WYJL049W 1353 nt2.17□□□□□ -2.06
RRP40Q08285 ERT1YBR239C 1590 nt2.17□□□□□ -2.06
RRP40Q08285 YBT1YLL048C 4986 nt2.17□□□□□ -2.06
RRP40Q08285 SMC6YLR383W 3345 nt2.16□□□□□ -2.06
RRP40Q08285 MAM1YER106W 909 nt2.16□□□□□ -2.06
RRP40Q08285 YHR180W-AYHR180W-A 183 nt2.16□□□□□ -2.06
RRP40Q08285 YJL114WYJL114W 681 nt2.16□□□□□ -2.06
RRP40Q08285 YNL089CYNL089C 477 nt2.16□□□□□ -2.06
RRP40Q08285 UFE1YOR075W 1041 nt2.16□□□□□ -2.06
RRP40Q08285 BTS1YPL069C 1008 nt2.16□□□□□ -2.06
RRP40Q08285 RFC5YBR087W 1065 nt2.16□□□□□ -2.06
RRP40Q08285 snR44snR44 211 nt2.16□□□□□ -2.06
RRP40Q08285 ARK1YNL020C 1917 nt2.16□□□□□ -2.06
RRP40Q08285 ANR2YKL047W 1551 nt2.15□□□□□ -2.06
RRP40Q08285 AEP1YMR064W 1557 nt2.15□□□□□ -2.06
RRP40Q08285 YOL098CYOL098C 3114 nt2.15□□□□□ -2.07
RRP40Q08285 YRB1YDR002W 606 nt2.15□□□□□ -2.07
RRP40Q08285 PEX4YGR133W 552 nt2.15□□□□□ -2.07
RRP40Q08285 YIL068W-AYIL068W-A 384 nt2.15□□□□□ -2.07
RRP40Q08285 AIM32YML050W 936 nt2.15□□□□□ -2.07
RRP40Q08285 DYN3YMR299C 939 nt2.15□□□□□ -2.07
RRP40Q08285 NGL1YOL042W 1092 nt2.15□□□□□ -2.07
RRP40Q08285 ARF3YOR094W 552 nt2.15□□□□□ -2.07
RRP40Q08285 TPS2YDR074W 2691 nt2.15□□□□□ -2.07
RRP40Q08285 NUP170YBL079W 4509 nt2.14□□□□□ -2.07
RRP40Q08285 YFH1YDL120W 525 nt2.14□□□□□ -2.07
RRP40Q08285 VTC1YER072W 390 nt2.14□□□□□ -2.07
RRP40Q08285 NOP19YGR251W 591 nt2.14□□□□□ -2.07
RRP40Q08285 YHL048C-AYHL048C-A 135 nt2.14□□□□□ -2.07
RRP40Q08285 FAR3YMR052W 615 nt2.14□□□□□ -2.07
RRP40Q08285 MRPL17YNL252C 846 nt2.14□□□□□ -2.07
RRP40Q08285 VMA9YCL005W-A 222 nt2.14□□□□□ -2.07
RRP40Q08285 SHR3YDL212W 633 nt2.13□□□□□ -2.07
RRP40Q08285 MVB12YGR206W 306 nt2.13□□□□□ -2.07
RRP40Q08285 OTU2YHL013C 924 nt2.13□□□□□ -2.07
RRP40Q08285 AYR1YIL124W 894 nt2.13□□□□□ -2.07
RRP40Q08285 ALB1YJL122W 528 nt2.13□□□□□ -2.07
RRP40Q08285 YOL134CYOL134C 390 nt2.13□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 55.6 ms