Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 SUP4tY(GUA)J2 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP5tY(GUA)M1 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP8tY(GUA)M2 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 SUP3tY(GUA)O 75 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 RPL6BYLR448W 531 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 HSP10YOR020C 321 nt5.1□□□□□ -1.59
TY1A-PR2P0CX60 NTH2YBR001C 2343 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 YDR338CYDR338C 2088 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 YLR177WYLR177W 1887 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 BYE1YKL005C 1785 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 YNL193WYNL193W 1677 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 RPS13YDR064W 456 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 RRT13YER066W 558 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 tR(ACG)DtR(ACG)D 73 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 tR(ACG)EtR(ACG)E 73 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 tR(ACG)KtR(ACG)K 73 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 tR(ACG)LtR(ACG)L 73 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 tR(ACG)OtR(ACG)O 73 nt5.09□□□□□ -1.59
TY1A-PR2P0CX60 HUL5YGL141W 2733 nt5.09□□□□□ -1.6
TY1A-PR2P0CX60 GPG1YGL121C 381 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 VAM7YGL212W 951 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 OPY2YPR075C 1083 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 SLM6YBR266C 453 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 YDL180WYDL180W 1644 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 YCK2YNL154C 1641 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 YDL199CYDL199C 2064 nt5.08□□□□□ -1.6
TY1A-PR2P0CX60 KCC4YCL024W 3114 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 YOL153CYOL153C 1746 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 ADK1YDR226W 669 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 RPL34AYER056C-A 366 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 RPL34BYIL052C 366 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 YLR001CYLR001C 2589 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 NPR2YEL062W 1848 nt5.07□□□□□ -1.6
TY1A-PR2P0CX60 THI7YLR237W 1797 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 RAT1YOR048C 3021 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 EMI1YDR512C 564 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 YGL042CYGL042C 306 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 SGN1YIR001C 753 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 YLR140WYLR140W 327 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 CSR1YLR380W 1227 nt5.06□□□□□ -1.6
TY1A-PR2P0CX60 EXO1YOR033C 2109 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 GPD1YDL022W 1176 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 STE14YDR410C 720 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 SIP2YGL208W 1248 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 MVB12YGR206W 306 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 PXR1YGR280C 816 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 IRC18YJL037W 675 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 YLR154W-EYLR154W-E 204 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 PIS1YPR113W 663 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 YPR114WYPR114W 948 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 SHQ1YIL104C 1524 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 ADE4YMR300C 1533 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 RNA14YMR061W 2034 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 SIP1YDR422C 2448 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 SEC6YIL068C 2418 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 HIS4YCL030C 2400 nt5.05□□□□□ -1.6
TY1A-PR2P0CX60 YHL018WYHL018W 363 nt5.04□□□□□ -1.6
TY1A-PR2P0CX60 YKL153WYKL153W 510 nt5.04□□□□□ -1.6
TY1A-PR2P0CX60 CWC24YLR323C 780 nt5.04□□□□□ -1.6
TY1A-PR2P0CX60 PCF11YDR228C 1881 nt5.04□□□□□ -1.6
TY1A-PR2P0CX60 ADE3YGR204W 2841 nt5.04□□□□□ -1.6
TY1A-PR2P0CX60 SSY5YJL156C 2100 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YEL077CYEL077C 3834 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YAL065CYAL065C 387 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 BUD20YLR074C 501 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YLR358CYLR358C 564 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YPL080CYPL080C 327 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YPR136CYPR136C 513 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 PHO88YBR106W 567 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 snR35snR35 204 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 STV1YMR054W 2673 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YKL100CYKL100C 1764 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 FRE3YOR381W 2136 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 YLL032CYLL032C 2478 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 BCH2YKR027W 2298 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 BFA1YJR053W 1725 nt5.03□□□□□ -1.6
TY1A-PR2P0CX60 MDM30YLR368W 1797 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 VTH1YIL173W 4650 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 VTH2YJL222W 4650 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 TRX3YCR083W 384 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 YDL247W-AYDL247W-A 75 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 PAU14YIL176C 363 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 PAU1YJL223C 363 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 RPA12YJR063W 378 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 YBL044WYBL044W 369 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 RHO2YNL090W 579 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 MGR1YCL044C 1254 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 CCT8YJL008C 1707 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 MCM3YEL032W 2916 nt5.02□□□□□ -1.61
TY1A-PR2P0CX60 YEL1YBL060W 2064 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 GAD1YMR250W 1758 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 YER158CYER158C 1722 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 PRK1YIL095W 2433 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 YCR081C-AYCR081C-A 237 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 tL(UAA)B1tL(UAA)B1 84 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 tL(UAA)B2tL(UAA)B2 84 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 tL(UAA)DtL(UAA)D 84 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 SUP51tL(UAA)J 84 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 tL(UAA)KtL(UAA)K 84 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 tL(UAA)LtL(UAA)L 84 nt5.01□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms