Protein–RNA interactions for Protein: Q9EQR3

Kcnn1, Small conductance calcium-activated potassium channel protein 1, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnn1Q9EQR3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Kcnn1Q9EQR3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Kcnn1Q9EQR3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.66■■■□□ 2.66
Kcnn1Q9EQR3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Kcnn1Q9EQR3 Nkain2-201ENSMUST00000092602 558 ntBASIC31.66■■■□□ 2.66
Kcnn1Q9EQR3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
Kcnn1Q9EQR3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
Kcnn1Q9EQR3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Kcnn1Q9EQR3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Kcnn1Q9EQR3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Kcnn1Q9EQR3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Kcnn1Q9EQR3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kcnn1Q9EQR3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
Kcnn1Q9EQR3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Kcnn1Q9EQR3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Kcnn1Q9EQR3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Kcnn1Q9EQR3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.57■■■□□ 2.64
Kcnn1Q9EQR3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.57■■■□□ 2.64
Kcnn1Q9EQR3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Kcnn1Q9EQR3 Gm11599-201ENSMUST00000118720 878 ntBASIC31.56■■■□□ 2.64
Kcnn1Q9EQR3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kcnn1Q9EQR3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kcnn1Q9EQR3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Kcnn1Q9EQR3 Cap2-205ENSMUST00000225824 1634 ntBASIC31.52■■■□□ 2.64
Kcnn1Q9EQR3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Kcnn1Q9EQR3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Kcnn1Q9EQR3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Kcnn1Q9EQR3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.5■■■□□ 2.63
Kcnn1Q9EQR3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
Kcnn1Q9EQR3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Kcnn1Q9EQR3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Kcnn1Q9EQR3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Kcnn1Q9EQR3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Kcnn1Q9EQR3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.47■■■□□ 2.63
Kcnn1Q9EQR3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.46■■■□□ 2.63
Kcnn1Q9EQR3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.45■■■□□ 2.63
Kcnn1Q9EQR3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kcnn1Q9EQR3 Gm11175-201ENSMUST00000116172 543 ntBASIC31.44■■■□□ 2.62
Kcnn1Q9EQR3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kcnn1Q9EQR3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Kcnn1Q9EQR3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Kcnn1Q9EQR3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Kcnn1Q9EQR3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Kcnn1Q9EQR3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Kcnn1Q9EQR3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.42■■■□□ 2.62
Kcnn1Q9EQR3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Kcnn1Q9EQR3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Kcnn1Q9EQR3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Kcnn1Q9EQR3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Kcnn1Q9EQR3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Kcnn1Q9EQR3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Kcnn1Q9EQR3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Kcnn1Q9EQR3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Kcnn1Q9EQR3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.37■■■□□ 2.61
Kcnn1Q9EQR3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Kcnn1Q9EQR3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Kcnn1Q9EQR3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.33■■■□□ 2.61
Kcnn1Q9EQR3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
Kcnn1Q9EQR3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Kcnn1Q9EQR3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Kcnn1Q9EQR3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
Kcnn1Q9EQR3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kcnn1Q9EQR3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kcnn1Q9EQR3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kcnn1Q9EQR3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Kcnn1Q9EQR3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Kcnn1Q9EQR3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.27■■■□□ 2.6
Kcnn1Q9EQR3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Kcnn1Q9EQR3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Kcnn1Q9EQR3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.25■■■□□ 2.59
Kcnn1Q9EQR3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Kcnn1Q9EQR3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.23■■■□□ 2.59
Kcnn1Q9EQR3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.22■■■□□ 2.59
Kcnn1Q9EQR3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Kcnn1Q9EQR3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Kcnn1Q9EQR3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Kcnn1Q9EQR3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Kcnn1Q9EQR3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Kcnn1Q9EQR3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Kcnn1Q9EQR3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Kcnn1Q9EQR3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Kcnn1Q9EQR3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Kcnn1Q9EQR3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Kcnn1Q9EQR3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Kcnn1Q9EQR3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Kcnn1Q9EQR3 Gm15039-201ENSMUST00000118914 875 ntBASIC31.11■■■□□ 2.57
Kcnn1Q9EQR3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Kcnn1Q9EQR3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Kcnn1Q9EQR3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Kcnn1Q9EQR3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.08■■■□□ 2.57
Kcnn1Q9EQR3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Kcnn1Q9EQR3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Kcnn1Q9EQR3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Kcnn1Q9EQR3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Kcnn1Q9EQR3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Kcnn1Q9EQR3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.06■■■□□ 2.56
Kcnn1Q9EQR3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.06■■■□□ 2.56
Kcnn1Q9EQR3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Kcnn1Q9EQR3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.05■■■□□ 2.56
Kcnn1Q9EQR3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms