Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssmem1Q9D9Y8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ssmem1Q9D9Y8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssmem1Q9D9Y8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssmem1Q9D9Y8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssmem1Q9D9Y8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.5■■□□□ 1.03
Ssmem1Q9D9Y8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.5■■□□□ 1.03
Ssmem1Q9D9Y8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ssmem1Q9D9Y8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssmem1Q9D9Y8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssmem1Q9D9Y8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ssmem1Q9D9Y8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.48■■□□□ 1.03
Ssmem1Q9D9Y8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssmem1Q9D9Y8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssmem1Q9D9Y8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ssmem1Q9D9Y8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.47■■□□□ 1.03
Ssmem1Q9D9Y8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Ssmem1Q9D9Y8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ssmem1Q9D9Y8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ssmem1Q9D9Y8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ssmem1Q9D9Y8 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.44■■□□□ 1.02
Ssmem1Q9D9Y8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.43■■□□□ 1.02
Ssmem1Q9D9Y8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssmem1Q9D9Y8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.43■■□□□ 1.02
Ssmem1Q9D9Y8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssmem1Q9D9Y8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ssmem1Q9D9Y8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssmem1Q9D9Y8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ssmem1Q9D9Y8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ssmem1Q9D9Y8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssmem1Q9D9Y8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssmem1Q9D9Y8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssmem1Q9D9Y8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ssmem1Q9D9Y8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.39■■□□□ 1.01
Ssmem1Q9D9Y8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.39■■□□□ 1.01
Ssmem1Q9D9Y8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssmem1Q9D9Y8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ssmem1Q9D9Y8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssmem1Q9D9Y8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ssmem1Q9D9Y8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ssmem1Q9D9Y8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssmem1Q9D9Y8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssmem1Q9D9Y8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ssmem1Q9D9Y8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssmem1Q9D9Y8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssmem1Q9D9Y8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssmem1Q9D9Y8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ssmem1Q9D9Y8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssmem1Q9D9Y8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ssmem1Q9D9Y8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ssmem1Q9D9Y8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssmem1Q9D9Y8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ssmem1Q9D9Y8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ssmem1Q9D9Y8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ssmem1Q9D9Y8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Ssmem1Q9D9Y8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssmem1Q9D9Y8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ssmem1Q9D9Y8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssmem1Q9D9Y8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.29■■□□□ 1
Ssmem1Q9D9Y8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssmem1Q9D9Y8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ssmem1Q9D9Y8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.27■□□□□ 0.99
Ssmem1Q9D9Y8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssmem1Q9D9Y8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssmem1Q9D9Y8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssmem1Q9D9Y8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.25■□□□□ 0.99
Ssmem1Q9D9Y8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.24■□□□□ 0.99
Ssmem1Q9D9Y8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssmem1Q9D9Y8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ssmem1Q9D9Y8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssmem1Q9D9Y8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.22■□□□□ 0.99
Ssmem1Q9D9Y8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ssmem1Q9D9Y8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ssmem1Q9D9Y8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ssmem1Q9D9Y8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ssmem1Q9D9Y8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ssmem1Q9D9Y8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.2■□□□□ 0.98
Ssmem1Q9D9Y8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ssmem1Q9D9Y8 Zxda-201ENSMUST00000117281 2621 ntBASIC21.18■□□□□ 0.98
Ssmem1Q9D9Y8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ssmem1Q9D9Y8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ssmem1Q9D9Y8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ssmem1Q9D9Y8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.16■□□□□ 0.98
Ssmem1Q9D9Y8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssmem1Q9D9Y8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssmem1Q9D9Y8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ssmem1Q9D9Y8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssmem1Q9D9Y8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.13■□□□□ 0.97
Ssmem1Q9D9Y8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssmem1Q9D9Y8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.12■□□□□ 0.97
Ssmem1Q9D9Y8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ssmem1Q9D9Y8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.11■□□□□ 0.97
Ssmem1Q9D9Y8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssmem1Q9D9Y8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssmem1Q9D9Y8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ssmem1Q9D9Y8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssmem1Q9D9Y8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssmem1Q9D9Y8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ssmem1Q9D9Y8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.08■□□□□ 0.96
Ssmem1Q9D9Y8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms