Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d6Q9D413 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.65■□□□□ 0.9
Sh2d6Q9D413 Gm24970-201ENSMUST00000175582 82 ntBASIC20.65■□□□□ 0.9
Sh2d6Q9D413 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d6Q9D413 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.64■□□□□ 0.89
Sh2d6Q9D413 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d6Q9D413 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d6Q9D413 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.63■□□□□ 0.89
Sh2d6Q9D413 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d6Q9D413 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d6Q9D413 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d6Q9D413 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Sh2d6Q9D413 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d6Q9D413 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d6Q9D413 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d6Q9D413 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Sh2d6Q9D413 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d6Q9D413 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d6Q9D413 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d6Q9D413 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sh2d6Q9D413 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d6Q9D413 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d6Q9D413 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sh2d6Q9D413 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sh2d6Q9D413 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.58■□□□□ 0.89
Sh2d6Q9D413 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.58■□□□□ 0.88
Sh2d6Q9D413 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d6Q9D413 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d6Q9D413 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Sh2d6Q9D413 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.55■□□□□ 0.88
Sh2d6Q9D413 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d6Q9D413 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.54■□□□□ 0.88
Sh2d6Q9D413 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.54■□□□□ 0.88
Sh2d6Q9D413 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d6Q9D413 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d6Q9D413 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d6Q9D413 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d6Q9D413 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sh2d6Q9D413 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.51■□□□□ 0.87
Sh2d6Q9D413 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d6Q9D413 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d6Q9D413 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d6Q9D413 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d6Q9D413 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh2d6Q9D413 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d6Q9D413 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh2d6Q9D413 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d6Q9D413 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d6Q9D413 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d6Q9D413 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d6Q9D413 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d6Q9D413 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sh2d6Q9D413 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Sh2d6Q9D413 Zxda-201ENSMUST00000117281 2621 ntBASIC20.46■□□□□ 0.87
Sh2d6Q9D413 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d6Q9D413 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.44■□□□□ 0.86
Sh2d6Q9D413 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d6Q9D413 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d6Q9D413 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d6Q9D413 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d6Q9D413 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d6Q9D413 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d6Q9D413 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d6Q9D413 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.41■□□□□ 0.86
Sh2d6Q9D413 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.4■□□□□ 0.86
Sh2d6Q9D413 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.39■□□□□ 0.86
Sh2d6Q9D413 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sh2d6Q9D413 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.39■□□□□ 0.85
Sh2d6Q9D413 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.38■□□□□ 0.85
Sh2d6Q9D413 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d6Q9D413 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d6Q9D413 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh2d6Q9D413 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sh2d6Q9D413 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.37■□□□□ 0.85
Sh2d6Q9D413 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2d6Q9D413 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Sh2d6Q9D413 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh2d6Q9D413 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sh2d6Q9D413 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.35■□□□□ 0.85
Sh2d6Q9D413 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d6Q9D413 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh2d6Q9D413 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2d6Q9D413 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2d6Q9D413 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.33■□□□□ 0.84
Sh2d6Q9D413 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.33■□□□□ 0.84
Sh2d6Q9D413 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d6Q9D413 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.32■□□□□ 0.84
Sh2d6Q9D413 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d6Q9D413 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d6Q9D413 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d6Q9D413 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d6Q9D413 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d6Q9D413 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.3■□□□□ 0.84
Sh2d6Q9D413 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d6Q9D413 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.29■□□□□ 0.84
Sh2d6Q9D413 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2d6Q9D413 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d6Q9D413 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d6Q9D413 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh2d6Q9D413 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms