Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRTAP3-3Q9BYR6 MTND2P9-201ENST00000422293 931 ntBASIC16.19■□□□□ 0.18
KRTAP3-3Q9BYR6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC16.19■□□□□ 0.18
KRTAP3-3Q9BYR6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC16.19■□□□□ 0.18
KRTAP3-3Q9BYR6 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC16.19■□□□□ 0.18
KRTAP3-3Q9BYR6 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRTAP3-3Q9BYR6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRTAP3-3Q9BYR6 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC16.18■□□□□ 0.18
KRTAP3-3Q9BYR6 TMF1P1-201ENST00000576058 373 ntBASIC16.18■□□□□ 0.18
KRTAP3-3Q9BYR6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.18■□□□□ 0.18
KRTAP3-3Q9BYR6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRTAP3-3Q9BYR6 SDR42E1P3-201ENST00000438345 502 ntBASIC16.17■□□□□ 0.18
KRTAP3-3Q9BYR6 RSL24D1P2-201ENST00000445584 366 ntBASIC16.17■□□□□ 0.18
KRTAP3-3Q9BYR6 CLIC4P2-201ENST00000601934 717 ntBASIC16.17■□□□□ 0.18
KRTAP3-3Q9BYR6 MFSD8-213ENST00000641134 1327 ntBASIC16.17■□□□□ 0.18
KRTAP3-3Q9BYR6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC16.16■□□□□ 0.18
KRTAP3-3Q9BYR6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC16.16■□□□□ 0.18
KRTAP3-3Q9BYR6 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC16.16■□□□□ 0.18
KRTAP3-3Q9BYR6 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC16.16■□□□□ 0.18
KRTAP3-3Q9BYR6 AC144521.1-201ENST00000607148 956 ntBASIC16.16■□□□□ 0.18
KRTAP3-3Q9BYR6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC16.16■□□□□ 0.18
KRTAP3-3Q9BYR6 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC16.15■□□□□ 0.18
KRTAP3-3Q9BYR6 UPF3AP2-201ENST00000457924 1132 ntBASIC16.15■□□□□ 0.18
KRTAP3-3Q9BYR6 AC118465.1-201ENST00000513820 1271 ntBASIC16.15■□□□□ 0.18
KRTAP3-3Q9BYR6 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC16.15■□□□□ 0.18
KRTAP3-3Q9BYR6 AC097478.2-201ENST00000610572 514 ntBASIC16.15■□□□□ 0.18
KRTAP3-3Q9BYR6 AC009118.3-201ENST00000622896 873 ntBASIC16.15■□□□□ 0.18
KRTAP3-3Q9BYR6 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRTAP3-3Q9BYR6 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC16.14■□□□□ 0.17
KRTAP3-3Q9BYR6 AP001542.1-201ENST00000591314 200 ntBASIC16.14■□□□□ 0.17
KRTAP3-3Q9BYR6 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC16.14■□□□□ 0.17
KRTAP3-3Q9BYR6 AC034229.4-201ENST00000607861 441 ntBASIC16.14■□□□□ 0.17
KRTAP3-3Q9BYR6 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC16.13■□□□□ 0.17
KRTAP3-3Q9BYR6 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC16.13■□□□□ 0.17
KRTAP3-3Q9BYR6 AL353718.1-201ENST00000451028 517 ntBASIC16.12■□□□□ 0.17
KRTAP3-3Q9BYR6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRTAP3-3Q9BYR6 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC16.11■□□□□ 0.17
KRTAP3-3Q9BYR6 AC007919.2-201ENST00000444110 511 ntBASIC16.11■□□□□ 0.17
KRTAP3-3Q9BYR6 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRTAP3-3Q9BYR6 AC104072.1-201ENST00000568817 668 ntBASIC16.11■□□□□ 0.17
KRTAP3-3Q9BYR6 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.11■□□□□ 0.17
KRTAP3-3Q9BYR6 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC16.1■□□□□ 0.17
KRTAP3-3Q9BYR6 AC006927.4-201ENST00000639187 543 ntBASIC16.1■□□□□ 0.17
KRTAP3-3Q9BYR6 AL356512.1-201ENST00000607453 1739 ntBASIC16.09■□□□□ 0.17
KRTAP3-3Q9BYR6 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRTAP3-3Q9BYR6 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC16.09■□□□□ 0.17
KRTAP3-3Q9BYR6 AC097520.1-201ENST00000624435 385 ntBASIC16.09■□□□□ 0.17
KRTAP3-3Q9BYR6 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC16.09■□□□□ 0.17
KRTAP3-3Q9BYR6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC16.08■□□□□ 0.16
KRTAP3-3Q9BYR6 MTND2P3-201ENST00000452458 470 ntBASIC16.08■□□□□ 0.16
KRTAP3-3Q9BYR6 SEPHS1P7-201ENST00000452995 1177 ntBASIC16.08■□□□□ 0.16
KRTAP3-3Q9BYR6 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC16.08■□□□□ 0.16
KRTAP3-3Q9BYR6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC16.08■□□□□ 0.16
KRTAP3-3Q9BYR6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
KRTAP3-3Q9BYR6 AC055748.1-201ENST00000489836 959 ntBASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 KRT8P2-201ENST00000556193 944 ntBASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 AL158050.2-201ENST00000605336 568 ntBASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 AC110792.4-201ENST00000609843 298 ntBASIC16.07■□□□□ 0.16
KRTAP3-3Q9BYR6 HLA-F-220ENST00000434407 884 ntBASIC16.06■□□□□ 0.16
KRTAP3-3Q9BYR6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC16.06■□□□□ 0.16
KRTAP3-3Q9BYR6 AC006213.5-201ENST00000619673 288 ntBASIC16.06■□□□□ 0.16
KRTAP3-3Q9BYR6 AC010740.1-201ENST00000417035 684 ntBASIC16.05■□□□□ 0.16
KRTAP3-3Q9BYR6 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRTAP3-3Q9BYR6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.05■□□□□ 0.16
KRTAP3-3Q9BYR6 AL022328.3-201ENST00000607943 679 ntBASIC16.05■□□□□ 0.16
KRTAP3-3Q9BYR6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC16.05■□□□□ 0.16
KRTAP3-3Q9BYR6 SETP12-201ENST00000514068 805 ntBASIC16.04■□□□□ 0.16
KRTAP3-3Q9BYR6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRTAP3-3Q9BYR6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC16.04■□□□□ 0.16
KRTAP3-3Q9BYR6 AC069503.1-202ENST00000616576 642 ntBASIC16.04■□□□□ 0.16
KRTAP3-3Q9BYR6 AC006963.1-201ENST00000624003 1052 ntBASIC16.04■□□□□ 0.16
KRTAP3-3Q9BYR6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
KRTAP3-3Q9BYR6 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC16.03■□□□□ 0.16
KRTAP3-3Q9BYR6 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC16.03■□□□□ 0.16
KRTAP3-3Q9BYR6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC16.03■□□□□ 0.16
KRTAP3-3Q9BYR6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.03■□□□□ 0.16
KRTAP3-3Q9BYR6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.02■□□□□ 0.16
KRTAP3-3Q9BYR6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRTAP3-3Q9BYR6 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC16.02■□□□□ 0.16
KRTAP3-3Q9BYR6 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC16.01■□□□□ 0.15
KRTAP3-3Q9BYR6 PAICSP2-201ENST00000429118 1150 ntBASIC16.01■□□□□ 0.15
KRTAP3-3Q9BYR6 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC16.01■□□□□ 0.15
KRTAP3-3Q9BYR6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC16■□□□□ 0.15
KRTAP3-3Q9BYR6 AC092723.2-201ENST00000624955 793 ntBASIC16■□□□□ 0.15
KRTAP3-3Q9BYR6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16■□□□□ 0.15
KRTAP3-3Q9BYR6 ART2BP-201ENST00000453501 499 ntBASIC15.99■□□□□ 0.15
KRTAP3-3Q9BYR6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.99■□□□□ 0.15
KRTAP3-3Q9BYR6 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC15.99■□□□□ 0.15
KRTAP3-3Q9BYR6 AP003108.4-201ENST00000623917 878 ntBASIC15.99■□□□□ 0.15
KRTAP3-3Q9BYR6 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRTAP3-3Q9BYR6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC15.98■□□□□ 0.15
KRTAP3-3Q9BYR6 AC092905.1-201ENST00000467527 949 ntBASIC15.98■□□□□ 0.15
KRTAP3-3Q9BYR6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC15.98■□□□□ 0.15
KRTAP3-3Q9BYR6 AC008507.2-201ENST00000588402 1176 ntBASIC15.98■□□□□ 0.15
KRTAP3-3Q9BYR6 AL157392.4-201ENST00000609756 345 ntBASIC15.98■□□□□ 0.15
KRTAP3-3Q9BYR6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms