Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb18Q91Y02 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb18Q91Y02 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdhb18Q91Y02 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pcdhb18Q91Y02 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhb18Q91Y02 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb18Q91Y02 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Pcdhb18Q91Y02 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb18Q91Y02 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.07■■□□□ 1.76
Pcdhb18Q91Y02 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb18Q91Y02 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb18Q91Y02 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb18Q91Y02 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Pcdhb18Q91Y02 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.04■■□□□ 1.76
Pcdhb18Q91Y02 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.04■■□□□ 1.76
Pcdhb18Q91Y02 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Pcdhb18Q91Y02 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.03■■□□□ 1.76
Pcdhb18Q91Y02 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdhb18Q91Y02 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb18Q91Y02 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb18Q91Y02 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdhb18Q91Y02 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb18Q91Y02 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Pcdhb18Q91Y02 Gm30346-201ENSMUST00000218641 1699 ntBASIC26■■□□□ 1.75
Pcdhb18Q91Y02 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb18Q91Y02 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.99■■□□□ 1.75
Pcdhb18Q91Y02 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb18Q91Y02 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.98■■□□□ 1.75
Pcdhb18Q91Y02 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb18Q91Y02 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Pcdhb18Q91Y02 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Pcdhb18Q91Y02 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb18Q91Y02 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.96■■□□□ 1.75
Pcdhb18Q91Y02 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb18Q91Y02 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb18Q91Y02 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb18Q91Y02 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb18Q91Y02 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb18Q91Y02 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb18Q91Y02 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb18Q91Y02 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Pcdhb18Q91Y02 Nkain2-201ENSMUST00000092602 558 ntBASIC25.9■■□□□ 1.74
Pcdhb18Q91Y02 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.89■■□□□ 1.74
Pcdhb18Q91Y02 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhb18Q91Y02 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.89■■□□□ 1.74
Pcdhb18Q91Y02 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Pcdhb18Q91Y02 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Pcdhb18Q91Y02 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Pcdhb18Q91Y02 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb18Q91Y02 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhb18Q91Y02 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhb18Q91Y02 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhb18Q91Y02 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhb18Q91Y02 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb18Q91Y02 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Pcdhb18Q91Y02 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
Pcdhb18Q91Y02 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb18Q91Y02 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb18Q91Y02 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb18Q91Y02 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.8■■□□□ 1.72
Pcdhb18Q91Y02 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Pcdhb18Q91Y02 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdhb18Q91Y02 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdhb18Q91Y02 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb18Q91Y02 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
Pcdhb18Q91Y02 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb18Q91Y02 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb18Q91Y02 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb18Q91Y02 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb18Q91Y02 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
Pcdhb18Q91Y02 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb18Q91Y02 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb18Q91Y02 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.76■■□□□ 1.71
Pcdhb18Q91Y02 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb18Q91Y02 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb18Q91Y02 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb18Q91Y02 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb18Q91Y02 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb18Q91Y02 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb18Q91Y02 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.73■■□□□ 1.71
Pcdhb18Q91Y02 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb18Q91Y02 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb18Q91Y02 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb18Q91Y02 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb18Q91Y02 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb18Q91Y02 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.69■■□□□ 1.7
Pcdhb18Q91Y02 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb18Q91Y02 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb18Q91Y02 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.68■■□□□ 1.7
Pcdhb18Q91Y02 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb18Q91Y02 Gm7432-201ENSMUST00000210343 879 ntBASIC25.66■■□□□ 1.7
Pcdhb18Q91Y02 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.64■■□□□ 1.7
Pcdhb18Q91Y02 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.64■■□□□ 1.7
Pcdhb18Q91Y02 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb18Q91Y02 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Pcdhb18Q91Y02 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
Pcdhb18Q91Y02 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb18Q91Y02 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb18Q91Y02 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb18Q91Y02 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms