Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga6Q91XY2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga6Q91XY2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga6Q91XY2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhga6Q91XY2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.51■■□□□ 1.51
Pcdhga6Q91XY2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhga6Q91XY2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhga6Q91XY2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga6Q91XY2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdhga6Q91XY2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga6Q91XY2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga6Q91XY2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga6Q91XY2 Mir6538-201ENSMUST00000183713 110 ntBASIC24.47■■□□□ 1.51
Pcdhga6Q91XY2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.47■■□□□ 1.51
Pcdhga6Q91XY2 Gm11599-201ENSMUST00000118720 878 ntBASIC24.46■■□□□ 1.51
Pcdhga6Q91XY2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Pcdhga6Q91XY2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.45■■□□□ 1.51
Pcdhga6Q91XY2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhga6Q91XY2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Pcdhga6Q91XY2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhga6Q91XY2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
Pcdhga6Q91XY2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhga6Q91XY2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.42■■□□□ 1.5
Pcdhga6Q91XY2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhga6Q91XY2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdhga6Q91XY2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.4■■□□□ 1.5
Pcdhga6Q91XY2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhga6Q91XY2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhga6Q91XY2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhga6Q91XY2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pcdhga6Q91XY2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhga6Q91XY2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhga6Q91XY2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhga6Q91XY2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhga6Q91XY2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhga6Q91XY2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhga6Q91XY2 Zxda-201ENSMUST00000117281 2621 ntBASIC24.34■■□□□ 1.49
Pcdhga6Q91XY2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhga6Q91XY2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Pcdhga6Q91XY2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhga6Q91XY2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga6Q91XY2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga6Q91XY2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhga6Q91XY2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdhga6Q91XY2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhga6Q91XY2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhga6Q91XY2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhga6Q91XY2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhga6Q91XY2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.26■■□□□ 1.47
Pcdhga6Q91XY2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Pcdhga6Q91XY2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhga6Q91XY2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga6Q91XY2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga6Q91XY2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Pcdhga6Q91XY2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pcdhga6Q91XY2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga6Q91XY2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga6Q91XY2 Gm11175-201ENSMUST00000116172 543 ntBASIC24.21■■□□□ 1.47
Pcdhga6Q91XY2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhga6Q91XY2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.21■■□□□ 1.47
Pcdhga6Q91XY2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.21■■□□□ 1.47
Pcdhga6Q91XY2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga6Q91XY2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhga6Q91XY2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.19■■□□□ 1.46
Pcdhga6Q91XY2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.19■■□□□ 1.46
Pcdhga6Q91XY2 Cap2-205ENSMUST00000225824 1634 ntBASIC24.19■■□□□ 1.46
Pcdhga6Q91XY2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga6Q91XY2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga6Q91XY2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Pcdhga6Q91XY2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga6Q91XY2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga6Q91XY2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.17■■□□□ 1.46
Pcdhga6Q91XY2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.16■■□□□ 1.46
Pcdhga6Q91XY2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Pcdhga6Q91XY2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhga6Q91XY2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga6Q91XY2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Pcdhga6Q91XY2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdhga6Q91XY2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhga6Q91XY2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhga6Q91XY2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhga6Q91XY2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.13■■□□□ 1.45
Pcdhga6Q91XY2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhga6Q91XY2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.13■■□□□ 1.45
Pcdhga6Q91XY2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhga6Q91XY2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhga6Q91XY2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga6Q91XY2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhga6Q91XY2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhga6Q91XY2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.08■■□□□ 1.45
Pcdhga6Q91XY2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.08■■□□□ 1.45
Pcdhga6Q91XY2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Pcdhga6Q91XY2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Pcdhga6Q91XY2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
Pcdhga6Q91XY2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga6Q91XY2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga6Q91XY2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga6Q91XY2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga6Q91XY2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
Pcdhga6Q91XY2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms