Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb11Q91UZ8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb11Q91UZ8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb11Q91UZ8 Gm9397-201ENSMUST00000200125 605 ntBASIC25.47■■□□□ 1.67
Pcdhb11Q91UZ8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb11Q91UZ8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb11Q91UZ8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.45■■□□□ 1.67
Pcdhb11Q91UZ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb11Q91UZ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
Pcdhb11Q91UZ8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb11Q91UZ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb11Q91UZ8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb11Q91UZ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb11Q91UZ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb11Q91UZ8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb11Q91UZ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.4■■□□□ 1.66
Pcdhb11Q91UZ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb11Q91UZ8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb11Q91UZ8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhb11Q91UZ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb11Q91UZ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.38■■□□□ 1.65
Pcdhb11Q91UZ8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb11Q91UZ8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb11Q91UZ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Pcdhb11Q91UZ8 Gm45855-201ENSMUST00000212546 880 ntBASIC25.36■■□□□ 1.65
Pcdhb11Q91UZ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.36■■□□□ 1.65
Pcdhb11Q91UZ8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhb11Q91UZ8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.35■■□□□ 1.65
Pcdhb11Q91UZ8 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.35■■□□□ 1.65
Pcdhb11Q91UZ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb11Q91UZ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.33■■□□□ 1.65
Pcdhb11Q91UZ8 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.33■■□□□ 1.64
Pcdhb11Q91UZ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb11Q91UZ8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb11Q91UZ8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
Pcdhb11Q91UZ8 Gm24970-201ENSMUST00000175582 82 ntBASIC25.31■■□□□ 1.64
Pcdhb11Q91UZ8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb11Q91UZ8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.3■■□□□ 1.64
Pcdhb11Q91UZ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.3■■□□□ 1.64
Pcdhb11Q91UZ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb11Q91UZ8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb11Q91UZ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb11Q91UZ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb11Q91UZ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Pcdhb11Q91UZ8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.28■■□□□ 1.64
Pcdhb11Q91UZ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb11Q91UZ8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.25■■□□□ 1.63
Pcdhb11Q91UZ8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhb11Q91UZ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb11Q91UZ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Pcdhb11Q91UZ8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Pcdhb11Q91UZ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb11Q91UZ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.23■■□□□ 1.63
Pcdhb11Q91UZ8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb11Q91UZ8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.23■■□□□ 1.63
Pcdhb11Q91UZ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb11Q91UZ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb11Q91UZ8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb11Q91UZ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Pcdhb11Q91UZ8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
Pcdhb11Q91UZ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb11Q91UZ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.2■■□□□ 1.62
Pcdhb11Q91UZ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb11Q91UZ8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb11Q91UZ8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb11Q91UZ8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb11Q91UZ8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.19■■□□□ 1.62
Pcdhb11Q91UZ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.18■■□□□ 1.62
Pcdhb11Q91UZ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb11Q91UZ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb11Q91UZ8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.17■■□□□ 1.62
Pcdhb11Q91UZ8 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.17■■□□□ 1.62
Pcdhb11Q91UZ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb11Q91UZ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb11Q91UZ8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
Pcdhb11Q91UZ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.15■■□□□ 1.62
Pcdhb11Q91UZ8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb11Q91UZ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb11Q91UZ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb11Q91UZ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Pcdhb11Q91UZ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb11Q91UZ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb11Q91UZ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb11Q91UZ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb11Q91UZ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
Pcdhb11Q91UZ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb11Q91UZ8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb11Q91UZ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb11Q91UZ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb11Q91UZ8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.07■■□□□ 1.6
Pcdhb11Q91UZ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb11Q91UZ8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb11Q91UZ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb11Q91UZ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb11Q91UZ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb11Q91UZ8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Pcdhb11Q91UZ8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Pcdhb11Q91UZ8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb11Q91UZ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb11Q91UZ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms