Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Zc3h3Q8CHP0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Zc3h3Q8CHP0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Zc3h3Q8CHP0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Zc3h3Q8CHP0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Zc3h3Q8CHP0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Zc3h3Q8CHP0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.3■■□□□ 1.64
Zc3h3Q8CHP0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Zc3h3Q8CHP0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Zc3h3Q8CHP0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Zc3h3Q8CHP0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Zc3h3Q8CHP0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Zc3h3Q8CHP0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Zc3h3Q8CHP0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.23■■□□□ 1.63
Zc3h3Q8CHP0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Zc3h3Q8CHP0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Zc3h3Q8CHP0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Zc3h3Q8CHP0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Zc3h3Q8CHP0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Zc3h3Q8CHP0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.2■■□□□ 1.62
Zc3h3Q8CHP0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Zc3h3Q8CHP0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Zc3h3Q8CHP0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Zc3h3Q8CHP0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Zc3h3Q8CHP0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Zc3h3Q8CHP0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Zc3h3Q8CHP0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Zc3h3Q8CHP0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
Zc3h3Q8CHP0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Zc3h3Q8CHP0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Zc3h3Q8CHP0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Zc3h3Q8CHP0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Zc3h3Q8CHP0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Zc3h3Q8CHP0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.1■■□□□ 1.61
Zc3h3Q8CHP0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Zc3h3Q8CHP0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
Zc3h3Q8CHP0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Zc3h3Q8CHP0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.08■■□□□ 1.61
Zc3h3Q8CHP0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Zc3h3Q8CHP0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.07■■□□□ 1.6
Zc3h3Q8CHP0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Zc3h3Q8CHP0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Zc3h3Q8CHP0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Zc3h3Q8CHP0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Zc3h3Q8CHP0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.05■■□□□ 1.6
Zc3h3Q8CHP0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.04■■□□□ 1.6
Zc3h3Q8CHP0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Zc3h3Q8CHP0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Zc3h3Q8CHP0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Zc3h3Q8CHP0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.02■■□□□ 1.6
Zc3h3Q8CHP0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Zc3h3Q8CHP0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Zc3h3Q8CHP0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Gm6311-201ENSMUST00000073790 878 ntBASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Zc3h3Q8CHP0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.95■■□□□ 1.59
Zc3h3Q8CHP0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Zc3h3Q8CHP0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.94■■□□□ 1.58
Zc3h3Q8CHP0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Zc3h3Q8CHP0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Zc3h3Q8CHP0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Zc3h3Q8CHP0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Zc3h3Q8CHP0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.93■■□□□ 1.58
Zc3h3Q8CHP0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Zc3h3Q8CHP0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Zc3h3Q8CHP0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.92■■□□□ 1.58
Zc3h3Q8CHP0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Zc3h3Q8CHP0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.92■■□□□ 1.58
Zc3h3Q8CHP0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Zc3h3Q8CHP0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Zc3h3Q8CHP0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Zc3h3Q8CHP0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Zc3h3Q8CHP0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.89■■□□□ 1.58
Zc3h3Q8CHP0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Zc3h3Q8CHP0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Zc3h3Q8CHP0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Zc3h3Q8CHP0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Zc3h3Q8CHP0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h3Q8CHP0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Zc3h3Q8CHP0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h3Q8CHP0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Zc3h3Q8CHP0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Zc3h3Q8CHP0 Gm15039-201ENSMUST00000118914 875 ntBASIC24.85■■□□□ 1.57
Zc3h3Q8CHP0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.85■■□□□ 1.57
Zc3h3Q8CHP0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Zc3h3Q8CHP0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Zc3h3Q8CHP0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.81■■□□□ 1.56
Zc3h3Q8CHP0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.81■■□□□ 1.56
Zc3h3Q8CHP0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.8■■□□□ 1.56
Zc3h3Q8CHP0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.8■■□□□ 1.56
Zc3h3Q8CHP0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Zc3h3Q8CHP0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Zc3h3Q8CHP0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.79■■□□□ 1.56
Zc3h3Q8CHP0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Zc3h3Q8CHP0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms